RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
LRP8-203ENST00000354412 CCNB3Q8WWL7 1395 aa19.82■□□□□ 0.76
LRP8-203ENST00000354412 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
LRP8-203ENST00000354412 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
LRP8-203ENST00000354412 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
LRP8-203ENST00000354412 CUL7Q14999 1698 aa19.8■□□□□ 0.76
LRP8-203ENST00000354412 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
LRP8-203ENST00000354412 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
LRP8-203ENST00000354412 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
LRP8-203ENST00000354412 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
LRP8-203ENST00000354412 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
LRP8-203ENST00000354412 NEFLP07196 543 aa19.71■□□□□ 0.75
LRP8-203ENST00000354412 FKBP8Q14318 412 aa19.71■□□□□ 0.75
LRP8-203ENST00000354412 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
LRP8-203ENST00000354412 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
LRP8-203ENST00000354412 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
LRP8-203ENST00000354412 MAP3K1Q13233 1512 aa19.68■□□□□ 0.74
LRP8-203ENST00000354412 TIMELESSQ9UNS1 1208 aa19.68■□□□□ 0.74
LRP8-203ENST00000354412 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
LRP8-203ENST00000354412 ITGAEP38570 1179 aa19.66■□□□□ 0.74
LRP8-203ENST00000354412 BCANQ96GW7 911 aa19.65■□□□□ 0.74
LRP8-203ENST00000354412 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
LRP8-203ENST00000354412 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
LRP8-203ENST00000354412 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
LRP8-203ENST00000354412 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
LRP8-203ENST00000354412 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
LRP8-203ENST00000354412 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
LRP8-203ENST00000354412 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
LRP8-203ENST00000354412 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
LRP8-203ENST00000354412 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
LRP8-203ENST00000354412 RBM19Q9Y4C8 960 aaKnown RBP19.59■□□□□ 0.73
LRP8-203ENST00000354412 PPP1R15AO75807 674 aaPredicted RBP19.58■□□□□ 0.73
LRP8-203ENST00000354412 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
LRP8-203ENST00000354412 TARBP1Q13395 1621 aaKnown RBP19.57■□□□□ 0.72
LRP8-203ENST00000354412 ANP32CO43423 234 aa19.56■□□□□ 0.72
LRP8-203ENST00000354412 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
LRP8-203ENST00000354412 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
LRP8-203ENST00000354412 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.716e-7■■■■□ 26.7
LRP8-203ENST00000354412 PCF11O94913 1555 aaKnown RBP19.51■□□□□ 0.71
LRP8-203ENST00000354412 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
LRP8-203ENST00000354412 FYCO1Q9BQS8 1478 aa19.49■□□□□ 0.71
LRP8-203ENST00000354412 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
LRP8-203ENST00000354412 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
LRP8-203ENST00000354412 SAMD9Q5K651 1589 aa19.47■□□□□ 0.71
LRP8-203ENST00000354412 LRRC9Q6ZRR7 1453 aa19.47■□□□□ 0.71
LRP8-203ENST00000354412 TRIM52Q96A61 297 aa19.45■□□□□ 0.7
LRP8-203ENST00000354412 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
LRP8-203ENST00000354412 CASKIN1Q8WXD9 1431 aa19.44■□□□□ 0.7
LRP8-203ENST00000354412 FMN1Q68DA7 1419 aa19.42■□□□□ 0.7
LRP8-203ENST00000354412 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
LRP8-203ENST00000354412 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
LRP8-203ENST00000354412 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
LRP8-203ENST00000354412 WDR62O43379 1518 aa19.41■□□□□ 0.7
LRP8-203ENST00000354412 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.7
LRP8-203ENST00000354412 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
LRP8-203ENST00000354412 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
LRP8-203ENST00000354412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.695e-10■■■■■ 69.7
LRP8-203ENST00000354412 FANCIQ9NVI1 1328 aa19.37■□□□□ 0.69
LRP8-203ENST00000354412 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
LRP8-203ENST00000354412 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
LRP8-203ENST00000354412 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
LRP8-203ENST00000354412 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
LRP8-203ENST00000354412 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
LRP8-203ENST00000354412 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.69
LRP8-203ENST00000354412 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
LRP8-203ENST00000354412 ERICH6BQ5W0A0 696 aa19.32■□□□□ 0.68
LRP8-203ENST00000354412 ERICH6Q7L0X2 663 aa19.29■□□□□ 0.68
LRP8-203ENST00000354412 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
LRP8-203ENST00000354412 MSH5O43196 834 aa19.28■□□□□ 0.68
LRP8-203ENST00000354412 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
LRP8-203ENST00000354412 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
LRP8-203ENST00000354412 HNRNPUQ00839 825 aaKnown RBP eCLIP19.25■□□□□ 0.67
LRP8-203ENST00000354412 CCDC18Q5T9S5 1454 aa19.21■□□□□ 0.67
LRP8-203ENST00000354412 UACAQ9BZF9 1416 aa19.21■□□□□ 0.66
LRP8-203ENST00000354412 EHBP1L1Q8N3D4 1523 aa19.2■□□□□ 0.66
LRP8-203ENST00000354412 EIF4G3O43432 1585 aaKnown RBP19.2■□□□□ 0.66
LRP8-203ENST00000354412 HECW1Q76N89 1606 aa19.2■□□□□ 0.66
LRP8-203ENST00000354412 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
LRP8-203ENST00000354412 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
LRP8-203ENST00000354412 PPP4R2Q9NY27 417 aa19.18■□□□□ 0.66
LRP8-203ENST00000354412 FBLN2P98095 1184 aa19.17■□□□□ 0.66
LRP8-203ENST00000354412 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
LRP8-203ENST00000354412 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
LRP8-203ENST00000354412 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
LRP8-203ENST00000354412 ARID3CA6NKF2 412 aa19.14■□□□□ 0.65
LRP8-203ENST00000354412 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
LRP8-203ENST00000354412 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
LRP8-203ENST00000354412 IRX6P78412 446 aaPredicted RBP19.1■□□□□ 0.65
LRP8-203ENST00000354412 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
LRP8-203ENST00000354412 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
LRP8-203ENST00000354412 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
LRP8-203ENST00000354412 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
LRP8-203ENST00000354412 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
LRP8-203ENST00000354412 PTPN23Q9H3S7 1636 aa19.06■□□□□ 0.64
LRP8-203ENST00000354412 WASHC2AQ641Q2 1341 aa19.05■□□□□ 0.64
LRP8-203ENST00000354412 EPRSP07814 1512 aaKnown RBP19.05■□□□□ 0.64
LRP8-203ENST00000354412 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.644e-7■■■■□ 23.1
LRP8-203ENST00000354412 NAIPQ13075 1403 aa19.04■□□□□ 0.64
LRP8-203ENST00000354412 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
LRP8-203ENST00000354412 CHMP7Q8WUX9 453 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms