RNA–Protein interactions for RNA: ENST00000352035.6

ACLY-201, Transcript of ATP citrate lyase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ACLY, Length 4,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACLY-201ENST00000352035 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
ACLY-201ENST00000352035 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
ACLY-201ENST00000352035 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
ACLY-201ENST00000352035 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
ACLY-201ENST00000352035 ZNF777Q9ULD5 760 aaPredicted RBP12.64□□□□□ -0.39
ACLY-201ENST00000352035 HIRIP3Q9BW71 556 aaPredicted RBP12.62□□□□□ -0.39
ACLY-201ENST00000352035 MTUS2Q5JR59 1369 aa12.61□□□□□ -0.39
ACLY-201ENST00000352035 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
ACLY-201ENST00000352035 RRP7BPQ9NSQ0 103 aa12.6□□□□□ -0.39
ACLY-201ENST00000352035 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
ACLY-201ENST00000352035 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
ACLY-201ENST00000352035 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
ACLY-201ENST00000352035 SIN3AQ96ST3 1273 aa12.59□□□□□ -0.39
ACLY-201ENST00000352035 PHLDB1Q86UU1 1377 aa12.57□□□□□ -0.4
ACLY-201ENST00000352035 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
ACLY-201ENST00000352035 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
ACLY-201ENST00000352035 MRC2Q9UBG0 1479 aa12.54□□□□□ -0.4
ACLY-201ENST00000352035 CNGB1Q14028 1251 aaPredicted RBP12.51□□□□□ -0.41
ACLY-201ENST00000352035 FOXD1Q16676 465 aa12.5□□□□□ -0.41
ACLY-201ENST00000352035 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
ACLY-201ENST00000352035 ZNF644Q9H582 1327 aaPredicted RBP12.48□□□□□ -0.41
ACLY-201ENST00000352035 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
ACLY-201ENST00000352035 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
ACLY-201ENST00000352035 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
ACLY-201ENST00000352035 FHAD1B1AJZ9 1412 aa12.48□□□□□ -0.41
ACLY-201ENST00000352035 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
ACLY-201ENST00000352035 RAB3GAP2Q9H2M9 1393 aa12.47□□□□□ -0.41
ACLY-201ENST00000352035 PCF11O94913 1555 aaKnown RBP12.46□□□□□ -0.42
ACLY-201ENST00000352035 LRRC9Q6ZRR7 1453 aa12.45□□□□□ -0.42
ACLY-201ENST00000352035 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
ACLY-201ENST00000352035 DHX57Q6P158 1386 aaKnown RBP12.43□□□□□ -0.42
ACLY-201ENST00000352035 MIER1Q8N108 512 aa12.42□□□□□ -0.42
ACLY-201ENST00000352035 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
ACLY-201ENST00000352035 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.42
ACLY-201ENST00000352035 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
ACLY-201ENST00000352035 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
ACLY-201ENST00000352035 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
ACLY-201ENST00000352035 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
ACLY-201ENST00000352035 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
ACLY-201ENST00000352035 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
ACLY-201ENST00000352035 CFDP1Q9UEE9 299 aaPredicted RBP12.36□□□□□ -0.43
ACLY-201ENST00000352035 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
ACLY-201ENST00000352035 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
ACLY-201ENST00000352035 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
ACLY-201ENST00000352035 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
ACLY-201ENST00000352035 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
ACLY-201ENST00000352035 CUL7Q14999 1698 aa12.33□□□□□ -0.44
ACLY-201ENST00000352035 PLEKHD1A6NEE1 506 aa12.33□□□□□ -0.44
ACLY-201ENST00000352035 DDX10Q13206 875 aaKnown RBP12.32□□□□□ -0.44
ACLY-201ENST00000352035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■■■■□ 25.5
ACLY-201ENST00000352035 NCOA2Q15596 1464 aa12.32□□□□□ -0.44
ACLY-201ENST00000352035 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
ACLY-201ENST00000352035 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
ACLY-201ENST00000352035 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■□□□□ 8.9
ACLY-201ENST00000352035 PTPRKQ15262 1439 aa12.3□□□□□ -0.44
ACLY-201ENST00000352035 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
ACLY-201ENST00000352035 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
ACLY-201ENST00000352035 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
ACLY-201ENST00000352035 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
ACLY-201ENST00000352035 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
ACLY-201ENST00000352035 WDR62O43379 1518 aa12.27□□□□□ -0.44
ACLY-201ENST00000352035 PBRM1Q86U86 1689 aa12.27□□□□□ -0.45
ACLY-201ENST00000352035 CTTNBP2Q8WZ74 1663 aa12.27□□□□□ -0.45
ACLY-201ENST00000352035 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
ACLY-201ENST00000352035 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
ACLY-201ENST00000352035 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
ACLY-201ENST00000352035 EFCAB5A4FU69 1503 aa12.25□□□□□ -0.45
ACLY-201ENST00000352035 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
ACLY-201ENST00000352035 SENP3-EIF4A1A0A087X0R7 540 aa12.25□□□□□ -0.45
ACLY-201ENST00000352035 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
ACLY-201ENST00000352035 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
ACLY-201ENST00000352035 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
ACLY-201ENST00000352035 KIAA0586Q9BVV6 1533 aa12.24□□□□□ -0.45
ACLY-201ENST00000352035 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
ACLY-201ENST00000352035 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
ACLY-201ENST00000352035 PTPRGP23470 1445 aa12.23□□□□□ -0.45
ACLY-201ENST00000352035 CARMIL2Q6F5E8 1435 aa12.23□□□□□ -0.45
ACLY-201ENST00000352035 SYNJ2O15056 1496 aa12.22□□□□□ -0.45
ACLY-201ENST00000352035 DISP1Q96F81 1524 aa12.21□□□□□ -0.45
ACLY-201ENST00000352035 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.46
ACLY-201ENST00000352035 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
ACLY-201ENST00000352035 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
ACLY-201ENST00000352035 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
ACLY-201ENST00000352035 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
ACLY-201ENST00000352035 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
ACLY-201ENST00000352035 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
ACLY-201ENST00000352035 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
ACLY-201ENST00000352035 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
ACLY-201ENST00000352035 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
ACLY-201ENST00000352035 CENPBP07199 599 aaPredicted RBP12.16□□□□□ -0.46
ACLY-201ENST00000352035 MAGI1Q96QZ7 1491 aaPredicted RBP12.15□□□□□ -0.46
ACLY-201ENST00000352035 SAMD9Q5K651 1589 aa12.15□□□□□ -0.46
ACLY-201ENST00000352035 PKD2Q13563 968 aa12.14□□□□□ -0.47
ACLY-201ENST00000352035 L3MBTL2Q969R5 705 aa12.14□□□□□ -0.47
ACLY-201ENST00000352035 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
ACLY-201ENST00000352035 LRRIQ1Q96JM4 1722 aa12.13□□□□□ -0.47
ACLY-201ENST00000352035 NAIPQ13075 1403 aa12.13□□□□□ -0.47
ACLY-201ENST00000352035 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
ACLY-201ENST00000352035 ACIN1Q9UKV3 1341 aaKnown RBP12.13□□□□□ -0.47
ACLY-201ENST00000352035 KIAA0556O60303 1618 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms