RNA–Protein interactions for RNA: ENST00000352035.6

ACLY-201, Transcript of ATP citrate lyase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ACLY, Length 4,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACLY-201ENST00000352035 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
ACLY-201ENST00000352035 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
ACLY-201ENST00000352035 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
ACLY-201ENST00000352035 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
ACLY-201ENST00000352035 ABCC9O60706 1549 aa15.02□□□□□ -0.01
ACLY-201ENST00000352035 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
ACLY-201ENST00000352035 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
ACLY-201ENST00000352035 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
ACLY-201ENST00000352035 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
ACLY-201ENST00000352035 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.087e-7■■■□□ 16.6
ACLY-201ENST00000352035 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
ACLY-201ENST00000352035 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
ACLY-201ENST00000352035 LOC105371045A0A1W2PR82 267 aa14.3□□□□□ -0.12
ACLY-201ENST00000352035 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
ACLY-201ENST00000352035 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
ACLY-201ENST00000352035 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
ACLY-201ENST00000352035 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
ACLY-201ENST00000352035 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
ACLY-201ENST00000352035 NACADO15069 1562 aa14.12□□□□□ -0.15
ACLY-201ENST00000352035 RB1CC1Q8TDY2 1594 aa14.08□□□□□ -0.16
ACLY-201ENST00000352035 MROH2BQ7Z745 1585 aa14.04□□□□□ -0.16
ACLY-201ENST00000352035 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
ACLY-201ENST00000352035 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
ACLY-201ENST00000352035 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.18
ACLY-201ENST00000352035 WIZO95785 1651 aa13.93□□□□□ -0.18
ACLY-201ENST00000352035 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
ACLY-201ENST00000352035 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
ACLY-201ENST00000352035 BAZ1AQ9NRL2 1556 aaPredicted RBP13.72□□□□□ -0.21
ACLY-201ENST00000352035 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
ACLY-201ENST00000352035 UBTFP17480 764 aaKnown RBP13.68□□□□□ -0.22
ACLY-201ENST00000352035 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
ACLY-201ENST00000352035 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
ACLY-201ENST00000352035 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
ACLY-201ENST00000352035 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
ACLY-201ENST00000352035 SOGA1O94964 1423 aa13.52□□□□□ -0.24
ACLY-201ENST00000352035 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.24
ACLY-201ENST00000352035 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
ACLY-201ENST00000352035 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
ACLY-201ENST00000352035 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
ACLY-201ENST00000352035 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
ACLY-201ENST00000352035 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
ACLY-201ENST00000352035 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
ACLY-201ENST00000352035 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
ACLY-201ENST00000352035 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
ACLY-201ENST00000352035 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
ACLY-201ENST00000352035 HRCP23327 699 aa13.34□□□□□ -0.27
ACLY-201ENST00000352035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
ACLY-201ENST00000352035 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
ACLY-201ENST00000352035 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
ACLY-201ENST00000352035 APLP2Q06481 763 aa13.23□□□□□ -0.29
ACLY-201ENST00000352035 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
ACLY-201ENST00000352035 CEP162Q5TB80 1403 aa13.2□□□□□ -0.3
ACLY-201ENST00000352035 ITGAEP38570 1179 aa13.2□□□□□ -0.3
ACLY-201ENST00000352035 NESP48681 1621 aa13.2□□□□□ -0.3
ACLY-201ENST00000352035 CCER1Q8TC90 406 aaPredicted RBP13.19□□□□□ -0.3
ACLY-201ENST00000352035 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
ACLY-201ENST00000352035 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
ACLY-201ENST00000352035 ARID3CA6NKF2 412 aa13.15□□□□□ -0.3
ACLY-201ENST00000352035 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
ACLY-201ENST00000352035 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
ACLY-201ENST00000352035 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
ACLY-201ENST00000352035 CLIP1P30622 1438 aa13.07□□□□□ -0.32
ACLY-201ENST00000352035 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
ACLY-201ENST00000352035 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
ACLY-201ENST00000352035 CUX2O14529 1486 aa13.06□□□□□ -0.32
ACLY-201ENST00000352035 CUX1P39880 1505 aa13.04□□□□□ -0.32
ACLY-201ENST00000352035 FBLN2P98095 1184 aa13.04□□□□□ -0.32
ACLY-201ENST00000352035 TDRD9Q8NDG6 1382 aaKnown RBP13.04□□□□□ -0.32
ACLY-201ENST00000352035 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
ACLY-201ENST00000352035 CFTRP13569 1480 aa13.02□□□□□ -0.32
ACLY-201ENST00000352035 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
ACLY-201ENST00000352035 HMGXB3Q12766 1538 aa13□□□□□ -0.33
ACLY-201ENST00000352035 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
ACLY-201ENST00000352035 KANK4Q5T7N3 995 aaPredicted RBP12.99□□□□□ -0.33
ACLY-201ENST00000352035 KIF27Q86VH2 1401 aa12.99□□□□□ -0.33
ACLY-201ENST00000352035 EEA1Q15075 1411 aa12.97□□□□□ -0.33
ACLY-201ENST00000352035 FGD5Q6ZNL6 1462 aa12.96□□□□□ -0.34
ACLY-201ENST00000352035 CARMIL1Q5VZK9 1371 aa12.92□□□□□ -0.34
ACLY-201ENST00000352035 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
ACLY-201ENST00000352035 IGF1RP08069 1367 aa12.91□□□□□ -0.34
ACLY-201ENST00000352035 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
ACLY-201ENST00000352035 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
ACLY-201ENST00000352035 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
ACLY-201ENST00000352035 AQRO60306 1485 aaKnown RBP eCLIP12.81□□□□□ -0.366e-7■■■■□ 24.3
ACLY-201ENST00000352035 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
ACLY-201ENST00000352035 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
ACLY-201ENST00000352035 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
ACLY-201ENST00000352035 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
ACLY-201ENST00000352035 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
ACLY-201ENST00000352035 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
ACLY-201ENST00000352035 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
ACLY-201ENST00000352035 KIF21BO75037 1637 aa12.79□□□□□ -0.36
ACLY-201ENST00000352035 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.36
ACLY-201ENST00000352035 BIVM-ERCC5R4GMW8 1640 aa12.74□□□□□ -0.37
ACLY-201ENST00000352035 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
ACLY-201ENST00000352035 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
ACLY-201ENST00000352035 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
ACLY-201ENST00000352035 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
ACLY-201ENST00000352035 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
ACLY-201ENST00000352035 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms