RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 CUL7Q14999 1698 aa22.76■■□□□ 1.23
TNFSF13-202ENST00000349228 EFCAB5A4FU69 1503 aa22.75■■□□□ 1.23
TNFSF13-202ENST00000349228 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
TNFSF13-202ENST00000349228 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
TNFSF13-202ENST00000349228 NEUROD1Q13562 356 aa22.7■■□□□ 1.22
TNFSF13-202ENST00000349228 AQRO60306 1485 aaKnown RBP eCLIP22.7■■□□□ 1.22
TNFSF13-202ENST00000349228 NESP48681 1621 aa22.68■■□□□ 1.22
TNFSF13-202ENST00000349228 CFAP43Q8NDM7 1665 aa22.66■■□□□ 1.22
TNFSF13-202ENST00000349228 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
TNFSF13-202ENST00000349228 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
TNFSF13-202ENST00000349228 CASKIN1Q8WXD9 1431 aa22.63■■□□□ 1.21
TNFSF13-202ENST00000349228 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
TNFSF13-202ENST00000349228 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
TNFSF13-202ENST00000349228 PCF11O94913 1555 aaKnown RBP22.61■■□□□ 1.21
TNFSF13-202ENST00000349228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.59■■□□□ 1.21
TNFSF13-202ENST00000349228 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
TNFSF13-202ENST00000349228 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
TNFSF13-202ENST00000349228 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.21
TNFSF13-202ENST00000349228 PHLDB1Q86UU1 1377 aa22.57■■□□□ 1.2
TNFSF13-202ENST00000349228 MIER1Q8N108 512 aa22.56■■□□□ 1.2
TNFSF13-202ENST00000349228 RAB3GAP2Q9H2M9 1393 aa22.56■■□□□ 1.2
TNFSF13-202ENST00000349228 FHOD3Q2V2M9 1422 aa22.56■■□□□ 1.2
TNFSF13-202ENST00000349228 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
TNFSF13-202ENST00000349228 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
TNFSF13-202ENST00000349228 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
TNFSF13-202ENST00000349228 ITGAEP38570 1179 aa22.52■■□□□ 1.19
TNFSF13-202ENST00000349228 GTF3C3Q9Y5Q9 886 aa22.48■■□□□ 1.19
TNFSF13-202ENST00000349228 TDRD9Q8NDG6 1382 aaKnown RBP22.45■■□□□ 1.19
TNFSF13-202ENST00000349228 FAM50AQ14320 339 aaKnown RBP22.45■■□□□ 1.18
TNFSF13-202ENST00000349228 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
TNFSF13-202ENST00000349228 SAMD9Q5K651 1589 aa22.45■■□□□ 1.18
TNFSF13-202ENST00000349228 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.18
TNFSF13-202ENST00000349228 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
TNFSF13-202ENST00000349228 MAPKBP1O60336 1514 aa22.43■■□□□ 1.18
TNFSF13-202ENST00000349228 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
TNFSF13-202ENST00000349228 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
TNFSF13-202ENST00000349228 FGD6Q6ZV73 1430 aa22.37■■□□□ 1.17
TNFSF13-202ENST00000349228 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
TNFSF13-202ENST00000349228 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
TNFSF13-202ENST00000349228 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
TNFSF13-202ENST00000349228 YTHDC1Q96MU7 727 aaKnown RBP22.33■■□□□ 1.17
TNFSF13-202ENST00000349228 EHBP1L1Q8N3D4 1523 aa22.28■■□□□ 1.16
TNFSF13-202ENST00000349228 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
TNFSF13-202ENST00000349228 MYOM3Q5VTT5 1437 aa22.26■■□□□ 1.15
TNFSF13-202ENST00000349228 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
TNFSF13-202ENST00000349228 NCOA2Q15596 1464 aa22.24■■□□□ 1.15
TNFSF13-202ENST00000349228 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
TNFSF13-202ENST00000349228 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
TNFSF13-202ENST00000349228 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
TNFSF13-202ENST00000349228 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
TNFSF13-202ENST00000349228 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
TNFSF13-202ENST00000349228 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
TNFSF13-202ENST00000349228 IQGAP2Q13576 1575 aa22.19■■□□□ 1.14
TNFSF13-202ENST00000349228 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
TNFSF13-202ENST00000349228 UGGT2Q9NYU1 1516 aa22.18■■□□□ 1.14
TNFSF13-202ENST00000349228 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
TNFSF13-202ENST00000349228 LRRIQ1Q96JM4 1722 aa22.18■■□□□ 1.14
TNFSF13-202ENST00000349228 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
TNFSF13-202ENST00000349228 IFT140Q96RY7 1462 aa22.16■■□□□ 1.14
TNFSF13-202ENST00000349228 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.14
TNFSF13-202ENST00000349228 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.13
TNFSF13-202ENST00000349228 TCOF1Q13428 1488 aaKnown RBP22.13■■□□□ 1.13
TNFSF13-202ENST00000349228 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
TNFSF13-202ENST00000349228 NAIPQ13075 1403 aa22.12■■□□□ 1.13
TNFSF13-202ENST00000349228 PRKCSHP14314 528 aaPredicted RBP22.1■■□□□ 1.13
TNFSF13-202ENST00000349228 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
TNFSF13-202ENST00000349228 AKNAQ7Z591 1439 aa22.09■■□□□ 1.13
TNFSF13-202ENST00000349228 EPRSP07814 1512 aaKnown RBP22.09■■□□□ 1.13
TNFSF13-202ENST00000349228 WDR62O43379 1518 aa22.07■■□□□ 1.12
TNFSF13-202ENST00000349228 MAGI3Q5TCQ9 1506 aa22.06■■□□□ 1.12
TNFSF13-202ENST00000349228 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
TNFSF13-202ENST00000349228 KIAA0586Q9BVV6 1533 aa22.05■■□□□ 1.12
TNFSF13-202ENST00000349228 GCC2Q8IWJ2 1684 aa21.97■■□□□ 1.11
TNFSF13-202ENST00000349228 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
TNFSF13-202ENST00000349228 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
TNFSF13-202ENST00000349228 KIAA0556O60303 1618 aa21.93■■□□□ 1.1
TNFSF13-202ENST00000349228 CDK13Q14004 1512 aaKnown RBP21.93■■□□□ 1.1
TNFSF13-202ENST00000349228 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
TNFSF13-202ENST00000349228 CDK11AQ9UQ88 783 aaPredicted RBP21.92■■□□□ 1.1
TNFSF13-202ENST00000349228 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
TNFSF13-202ENST00000349228 ROCK1Q13464 1354 aa21.91■■□□□ 1.1
TNFSF13-202ENST00000349228 CCER2I3L3R5 266 aa21.9■■□□□ 1.1
TNFSF13-202ENST00000349228 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
TNFSF13-202ENST00000349228 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
TNFSF13-202ENST00000349228 DAXXQ9UER7 740 aaPredicted RBP21.89■■□□□ 1.1
TNFSF13-202ENST00000349228 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
TNFSF13-202ENST00000349228 EIF4G3O43432 1585 aaKnown RBP21.86■■□□□ 1.09
TNFSF13-202ENST00000349228 RAPGEF6Q8TEU7 1601 aa21.85■■□□□ 1.09
TNFSF13-202ENST00000349228 NUP153P49790 1475 aaKnown RBP21.85■■□□□ 1.09
TNFSF13-202ENST00000349228 ANP32CO43423 234 aa21.84■■□□□ 1.09
TNFSF13-202ENST00000349228 CHIC2Q9UKJ5 165 aa21.84■■□□□ 1.09
TNFSF13-202ENST00000349228 KDM5BQ9UGL1 1544 aa21.82■■□□□ 1.08
TNFSF13-202ENST00000349228 DAPK1P53355 1430 aa21.82■■□□□ 1.08
TNFSF13-202ENST00000349228 TRIM52Q96A61 297 aa21.82■■□□□ 1.08
TNFSF13-202ENST00000349228 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
TNFSF13-202ENST00000349228 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
TNFSF13-202ENST00000349228 MPHOSPH9Q99550 1183 aa21.8■■□□□ 1.08
TNFSF13-202ENST00000349228 DNMT1P26358 1616 aaKnown RBP21.79■■□□□ 1.08
TNFSF13-202ENST00000349228 DENND4BO75064 1496 aaPredicted RBP21.78■■□□□ 1.08
TNFSF13-202ENST00000349228 ABCC5O15440 1437 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms