RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 JPH4Q96JJ6 628 aa9.41□□□□□ -0.9
NDRG3-201ENST00000349004 CEP170Q5SW79 1584 aa9.41□□□□□ -0.9
NDRG3-201ENST00000349004 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
NDRG3-201ENST00000349004 FHAD1B1AJZ9 1412 aa9.39□□□□□ -0.91
NDRG3-201ENST00000349004 ADAMTS12P58397 1594 aa9.39□□□□□ -0.91
NDRG3-201ENST00000349004 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
NDRG3-201ENST00000349004 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
NDRG3-201ENST00000349004 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
NDRG3-201ENST00000349004 PRG4Q92954 1404 aaPredicted RBP9.37□□□□□ -0.91
NDRG3-201ENST00000349004 CLASP1Q7Z460 1538 aa9.36□□□□□ -0.91
NDRG3-201ENST00000349004 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
NDRG3-201ENST00000349004 NUP160Q12769 1436 aa9.32□□□□□ -0.92
NDRG3-201ENST00000349004 HRCP23327 699 aa9.3□□□□□ -0.92
NDRG3-201ENST00000349004 PPARGC1BQ86YN6 1023 aaKnown RBP9.3□□□□□ -0.92
NDRG3-201ENST00000349004 CSRNP3Q8WYN3 585 aa9.29□□□□□ -0.92
NDRG3-201ENST00000349004 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
NDRG3-201ENST00000349004 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
NDRG3-201ENST00000349004 RAPGEF2Q9Y4G8 1499 aa9.26□□□□□ -0.93
NDRG3-201ENST00000349004 FAM69CQ0P6D2 419 aa9.25□□□□□ -0.93
NDRG3-201ENST00000349004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
NDRG3-201ENST00000349004 NPM1P06748 294 aaKnown RBP eCLIP9.25□□□□□ -0.93
NDRG3-201ENST00000349004 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
NDRG3-201ENST00000349004 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
NDRG3-201ENST00000349004 KIAA0586Q9BVV6 1533 aa9.23□□□□□ -0.93
NDRG3-201ENST00000349004 PTPRGP23470 1445 aa9.23□□□□□ -0.93
NDRG3-201ENST00000349004 CUL7Q14999 1698 aa9.22□□□□□ -0.93
NDRG3-201ENST00000349004 IQGAP2Q13576 1575 aa9.2□□□□□ -0.94
NDRG3-201ENST00000349004 PLB1Q6P1J6 1458 aa9.19□□□□□ -0.94
NDRG3-201ENST00000349004 SHROOM2Q13796 1616 aa9.19□□□□□ -0.94
NDRG3-201ENST00000349004 DISP1Q96F81 1524 aa9.18□□□□□ -0.94
NDRG3-201ENST00000349004 CARMIL2Q6F5E8 1435 aa9.17□□□□□ -0.94
NDRG3-201ENST00000349004 TSPOAP1O95153 1857 aa9.17□□□□□ -0.94
NDRG3-201ENST00000349004 ADCY10Q96PN6 1610 aa9.17□□□□□ -0.94
NDRG3-201ENST00000349004 PRXQ9BXM0 1461 aa9.17□□□□□ -0.94
NDRG3-201ENST00000349004 TNIKQ9UKE5 1360 aa9.16□□□□□ -0.94
NDRG3-201ENST00000349004 FHOD3Q2V2M9 1422 aa9.16□□□□□ -0.94
NDRG3-201ENST00000349004 ASXL2Q76L83 1435 aa9.11□□□□□ -0.95
NDRG3-201ENST00000349004 UACAQ9BZF9 1416 aa9.11□□□□□ -0.95
NDRG3-201ENST00000349004 KIAA0556O60303 1618 aa9.1□□□□□ -0.95
NDRG3-201ENST00000349004 CTTNBP2Q8WZ74 1663 aa9.1□□□□□ -0.95
NDRG3-201ENST00000349004 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
NDRG3-201ENST00000349004 ABCC2Q92887 1545 aa9.08□□□□□ -0.96
NDRG3-201ENST00000349004 KIF13AQ9H1H9 1805 aa9.07□□□□□ -0.96
NDRG3-201ENST00000349004 UGGT2Q9NYU1 1516 aa9.07□□□□□ -0.96
NDRG3-201ENST00000349004 ABCC10Q5T3U5 1492 aa9.05□□□□□ -0.96
NDRG3-201ENST00000349004 TRIM26Q12899 539 aaPredicted RBP9.04□□□□□ -0.96
NDRG3-201ENST00000349004 ZCCHC11Q5TAX3 1644 aaKnown RBP9.03□□□□□ -0.96
NDRG3-201ENST00000349004 DIP2BQ9P265 1576 aa9.03□□□□□ -0.96
NDRG3-201ENST00000349004 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
NDRG3-201ENST00000349004 GOLGA3Q08378 1498 aa9.02□□□□□ -0.96
NDRG3-201ENST00000349004 EEA1Q15075 1411 aa9.02□□□□□ -0.97
NDRG3-201ENST00000349004 CDK13Q14004 1512 aaKnown RBP9.02□□□□□ -0.97
NDRG3-201ENST00000349004 ATP10BO94823 1461 aa9.01□□□□□ -0.97
NDRG3-201ENST00000349004 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
NDRG3-201ENST00000349004 ARHGAP35Q9NRY4 1499 aa8.99□□□□□ -0.97
NDRG3-201ENST00000349004 PLEKHD1A6NEE1 506 aa8.99□□□□□ -0.97
NDRG3-201ENST00000349004 MAPKBP1O60336 1514 aa8.99□□□□□ -0.97
NDRG3-201ENST00000349004 EPRSP07814 1512 aaKnown RBP8.99□□□□□ -0.97
NDRG3-201ENST00000349004 KDM5BQ9UGL1 1544 aa8.99□□□□□ -0.97
NDRG3-201ENST00000349004 MYT1LQ9UL68 1186 aa8.98□□□□□ -0.97
NDRG3-201ENST00000349004 KIF21BO75037 1637 aa8.98□□□□□ -0.97
NDRG3-201ENST00000349004 NUP153P49790 1475 aaKnown RBP8.98□□□□□ -0.97
NDRG3-201ENST00000349004 WDR7Q9Y4E6 1490 aa8.98□□□□□ -0.97
NDRG3-201ENST00000349004 ZNF777Q9ULD5 760 aaPredicted RBP8.98□□□□□ -0.97
NDRG3-201ENST00000349004 CD109Q6YHK3 1445 aa8.98□□□□□ -0.97
NDRG3-201ENST00000349004 ABCA8O94911 1581 aa8.98□□□□□ -0.97
NDRG3-201ENST00000349004 KDM6BO15054 1643 aa8.96□□□□□ -0.98
NDRG3-201ENST00000349004 SAMD9Q5K651 1589 aa8.96□□□□□ -0.98
NDRG3-201ENST00000349004 MLECQ14165 292 aa8.96□□□□□ -0.98
NDRG3-201ENST00000349004 CLIP1P30622 1438 aa8.95□□□□□ -0.98
NDRG3-201ENST00000349004 RAPGEF6Q8TEU7 1601 aa8.95□□□□□ -0.98
NDRG3-201ENST00000349004 UHRF1BP1LA0JNW5 1464 aa8.95□□□□□ -0.98
NDRG3-201ENST00000349004 ARID4BQ4LE39 1312 aaPredicted RBP8.94□□□□□ -0.98
NDRG3-201ENST00000349004 KDM4FA0A1W2PPD8 638 aa8.94□□□□□ -0.98
NDRG3-201ENST00000349004 PPRC1Q5VV67 1664 aaKnown RBP8.91□□□□□ -0.98
NDRG3-201ENST00000349004 CEP162Q5TB80 1403 aa8.91□□□□□ -0.98
NDRG3-201ENST00000349004 AFAP1Q8N556 730 aa8.9□□□□□ -0.99
NDRG3-201ENST00000349004 PCF11O94913 1555 aaKnown RBP8.89□□□□□ -0.99
NDRG3-201ENST00000349004 FMN1Q68DA7 1419 aa8.88□□□□□ -0.99
NDRG3-201ENST00000349004 ZNF644Q9H582 1327 aaPredicted RBP8.87□□□□□ -0.99
NDRG3-201ENST00000349004 TTC37Q6PGP7 1564 aa8.87□□□□□ -0.99
NDRG3-201ENST00000349004 KIF14Q15058 1648 aa8.87□□□□□ -0.99
NDRG3-201ENST00000349004 LRRIQ1Q96JM4 1722 aa8.87□□□□□ -0.99
NDRG3-201ENST00000349004 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
NDRG3-201ENST00000349004 EFCAB5A4FU69 1503 aa8.86□□□□□ -0.99
NDRG3-201ENST00000349004 HNRNPMP52272 730 aaKnown RBP eCLIP8.86□□□□□ -0.99
NDRG3-201ENST00000349004 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
NDRG3-201ENST00000349004 CDK11AQ9UQ88 783 aaPredicted RBP8.85□□□□□ -0.99
NDRG3-201ENST00000349004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.85□□□□□ -0.99
NDRG3-201ENST00000349004 MAGI3Q5TCQ9 1506 aa8.85□□□□□ -0.99
NDRG3-201ENST00000349004 FANCAO15360 1455 aa8.84□□□□□ -0.99
NDRG3-201ENST00000349004 MTUS2Q5JR59 1369 aa8.83□□□□□ -1
NDRG3-201ENST00000349004 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
NDRG3-201ENST00000349004 GLI2P10070 1586 aa8.83□□□□□ -1
NDRG3-201ENST00000349004 SCAPERQ9BY12 1400 aa8.82□□□□□ -1
NDRG3-201ENST00000349004 YEATS2Q9ULM3 1422 aa8.82□□□□□ -1
NDRG3-201ENST00000349004 CEBPAP49715 358 aaPredicted RBP8.82□□□□□ -1
NDRG3-201ENST00000349004 HECW1Q76N89 1606 aa8.82□□□□□ -1
NDRG3-201ENST00000349004 DAXXQ9UER7 740 aaPredicted RBP8.82□□□□□ -1
NDRG3-201ENST00000349004 AKNAQ7Z591 1439 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms