RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 ITGAEP38570 1179 aa14.4□□□□□ -0.1
TRAPPC6B-202ENST00000347691 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
TRAPPC6B-202ENST00000347691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAPPC6B-202ENST00000347691 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
TRAPPC6B-202ENST00000347691 TSHZ2Q9NRE2 1034 aa14.38□□□□□ -0.11
TRAPPC6B-202ENST00000347691 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
TRAPPC6B-202ENST00000347691 EFCAB5A4FU69 1503 aa14.35□□□□□ -0.11
TRAPPC6B-202ENST00000347691 CCER2I3L3R5 266 aa14.35□□□□□ -0.11
TRAPPC6B-202ENST00000347691 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
TRAPPC6B-202ENST00000347691 FYCO1Q9BQS8 1478 aa14.34□□□□□ -0.11
TRAPPC6B-202ENST00000347691 AQRO60306 1485 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC6B-202ENST00000347691 NEFLP07196 543 aa14.33□□□□□ -0.12
TRAPPC6B-202ENST00000347691 PCF11O94913 1555 aaKnown RBP14.33□□□□□ -0.12
TRAPPC6B-202ENST00000347691 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
TRAPPC6B-202ENST00000347691 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
TRAPPC6B-202ENST00000347691 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
TRAPPC6B-202ENST00000347691 ANP32EQ9BTT0 268 aa14.3□□□□□ -0.12
TRAPPC6B-202ENST00000347691 PPP1R15AO75807 674 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC6B-202ENST00000347691 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
TRAPPC6B-202ENST00000347691 ANP32CO43423 234 aa14.29□□□□□ -0.12
TRAPPC6B-202ENST00000347691 CASKIN1Q8WXD9 1431 aa14.28□□□□□ -0.12
TRAPPC6B-202ENST00000347691 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.13
TRAPPC6B-202ENST00000347691 CUL7Q14999 1698 aa14.26□□□□□ -0.13
TRAPPC6B-202ENST00000347691 FKBP8Q14318 412 aa14.25□□□□□ -0.13
TRAPPC6B-202ENST00000347691 SIN3AQ96ST3 1273 aa14.25□□□□□ -0.13
TRAPPC6B-202ENST00000347691 KCNH8Q96L42 1107 aa14.24□□□□□ -0.13
TRAPPC6B-202ENST00000347691 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
TRAPPC6B-202ENST00000347691 CTTNBP2Q8WZ74 1663 aa14.23□□□□□ -0.13
TRAPPC6B-202ENST00000347691 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
TRAPPC6B-202ENST00000347691 ABCA10Q8WWZ4 1543 aa14.22□□□□□ -0.13
TRAPPC6B-202ENST00000347691 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
TRAPPC6B-202ENST00000347691 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
TRAPPC6B-202ENST00000347691 UACAQ9BZF9 1416 aa14.2□□□□□ -0.14
TRAPPC6B-202ENST00000347691 FHOD3Q2V2M9 1422 aa14.2□□□□□ -0.14
TRAPPC6B-202ENST00000347691 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
TRAPPC6B-202ENST00000347691 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
TRAPPC6B-202ENST00000347691 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
TRAPPC6B-202ENST00000347691 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC6B-202ENST00000347691 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
TRAPPC6B-202ENST00000347691 BCANQ96GW7 911 aa14.17□□□□□ -0.14
TRAPPC6B-202ENST00000347691 PTPN23Q9H3S7 1636 aa14.16□□□□□ -0.14
TRAPPC6B-202ENST00000347691 MTUS2Q5JR59 1369 aa14.14□□□□□ -0.15
TRAPPC6B-202ENST00000347691 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
TRAPPC6B-202ENST00000347691 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
TRAPPC6B-202ENST00000347691 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
TRAPPC6B-202ENST00000347691 PRKCSHP14314 528 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC6B-202ENST00000347691 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
TRAPPC6B-202ENST00000347691 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
TRAPPC6B-202ENST00000347691 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
TRAPPC6B-202ENST00000347691 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC6B-202ENST00000347691 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
TRAPPC6B-202ENST00000347691 SAMD9Q5K651 1589 aa14.1□□□□□ -0.15
TRAPPC6B-202ENST00000347691 RBM19Q9Y4C8 960 aaKnown RBP14.1□□□□□ -0.15
TRAPPC6B-202ENST00000347691 ERICH6BQ5W0A0 696 aa14.1□□□□□ -0.15
TRAPPC6B-202ENST00000347691 TRIM52Q96A61 297 aa14.1□□□□□ -0.15
TRAPPC6B-202ENST00000347691 NAIPQ13075 1403 aa14.09□□□□□ -0.15
TRAPPC6B-202ENST00000347691 NCOA2Q15596 1464 aa14.08□□□□□ -0.16
TRAPPC6B-202ENST00000347691 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
TRAPPC6B-202ENST00000347691 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
TRAPPC6B-202ENST00000347691 AKNAQ7Z591 1439 aa14.06□□□□□ -0.16
TRAPPC6B-202ENST00000347691 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC6B-202ENST00000347691 HECW1Q76N89 1606 aa14.05□□□□□ -0.16
TRAPPC6B-202ENST00000347691 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
TRAPPC6B-202ENST00000347691 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
TRAPPC6B-202ENST00000347691 UGGT2Q9NYU1 1516 aa14.03□□□□□ -0.16
TRAPPC6B-202ENST00000347691 KDM5BQ9UGL1 1544 aa14.02□□□□□ -0.16
TRAPPC6B-202ENST00000347691 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.16
TRAPPC6B-202ENST00000347691 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC6B-202ENST00000347691 ARHGEF11O15085 1522 aa14.02□□□□□ -0.17
TRAPPC6B-202ENST00000347691 LRRIQ1Q96JM4 1722 aa14.02□□□□□ -0.17
TRAPPC6B-202ENST00000347691 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
TRAPPC6B-202ENST00000347691 HNRNPUQ00839 825 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRAPPC6B-202ENST00000347691 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
TRAPPC6B-202ENST00000347691 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAPPC6B-202ENST00000347691 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TRAPPC6B-202ENST00000347691 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
TRAPPC6B-202ENST00000347691 MIA2Q96PC5 1412 aa13.96□□□□□ -0.17
TRAPPC6B-202ENST00000347691 GAPVD1Q14C86 1478 aa13.96□□□□□ -0.17
TRAPPC6B-202ENST00000347691 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.18
TRAPPC6B-202ENST00000347691 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
TRAPPC6B-202ENST00000347691 PPP4R2Q9NY27 417 aa13.94□□□□□ -0.18
TRAPPC6B-202ENST00000347691 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
TRAPPC6B-202ENST00000347691 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
TRAPPC6B-202ENST00000347691 URB2Q14146 1524 aaKnown RBP13.92□□□□□ -0.18
TRAPPC6B-202ENST00000347691 POLR1AO95602 1720 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC6B-202ENST00000347691 NCOA1Q15788 1441 aa13.91□□□□□ -0.18
TRAPPC6B-202ENST00000347691 BCL11AQ9H165 835 aa13.9□□□□□ -0.18
TRAPPC6B-202ENST00000347691 CCDC7Q96M83 1385 aa13.89□□□□□ -0.19
TRAPPC6B-202ENST00000347691 MAGI3Q5TCQ9 1506 aa13.89□□□□□ -0.19
TRAPPC6B-202ENST00000347691 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
TRAPPC6B-202ENST00000347691 RRP7BPQ9NSQ0 103 aa13.88□□□□□ -0.19
TRAPPC6B-202ENST00000347691 ROCK1Q13464 1354 aa13.88□□□□□ -0.19
TRAPPC6B-202ENST00000347691 NESP48681 1621 aa13.88□□□□□ -0.19
TRAPPC6B-202ENST00000347691 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
TRAPPC6B-202ENST00000347691 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC6B-202ENST00000347691 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
TRAPPC6B-202ENST00000347691 EPRSP07814 1512 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-202ENST00000347691 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
TRAPPC6B-202ENST00000347691 PRKRIP1Q9H875 184 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC6B-202ENST00000347691 RPRD2Q5VT52 1461 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms