RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
TRAPPC6B-202ENST00000347691 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
TRAPPC6B-202ENST00000347691 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
TRAPPC6B-202ENST00000347691 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
TRAPPC6B-202ENST00000347691 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
TRAPPC6B-202ENST00000347691 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
TRAPPC6B-202ENST00000347691 HRCP23327 699 aa16.77■□□□□ 0.27
TRAPPC6B-202ENST00000347691 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
TRAPPC6B-202ENST00000347691 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
TRAPPC6B-202ENST00000347691 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
TRAPPC6B-202ENST00000347691 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
TRAPPC6B-202ENST00000347691 ABCC9O60706 1549 aa16.3■□□□□ 0.2
TRAPPC6B-202ENST00000347691 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC6B-202ENST00000347691 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
TRAPPC6B-202ENST00000347691 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
TRAPPC6B-202ENST00000347691 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC6B-202ENST00000347691 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC6B-202ENST00000347691 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
TRAPPC6B-202ENST00000347691 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
TRAPPC6B-202ENST00000347691 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
TRAPPC6B-202ENST00000347691 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
TRAPPC6B-202ENST00000347691 NACADO15069 1562 aa15.85■□□□□ 0.13
TRAPPC6B-202ENST00000347691 FAM9AQ8IZU1 332 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC6B-202ENST00000347691 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
TRAPPC6B-202ENST00000347691 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC6B-202ENST00000347691 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
TRAPPC6B-202ENST00000347691 WIZO95785 1651 aa15.62■□□□□ 0.09
TRAPPC6B-202ENST00000347691 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
TRAPPC6B-202ENST00000347691 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
TRAPPC6B-202ENST00000347691 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
TRAPPC6B-202ENST00000347691 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
TRAPPC6B-202ENST00000347691 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC6B-202ENST00000347691 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
TRAPPC6B-202ENST00000347691 EEA1Q15075 1411 aa15.44■□□□□ 0.06
TRAPPC6B-202ENST00000347691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.06
TRAPPC6B-202ENST00000347691 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
TRAPPC6B-202ENST00000347691 ACIN1Q9UKV3 1341 aaKnown RBP15.39■□□□□ 0.05
TRAPPC6B-202ENST00000347691 CENPBP07199 599 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC6B-202ENST00000347691 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
TRAPPC6B-202ENST00000347691 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
TRAPPC6B-202ENST00000347691 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
TRAPPC6B-202ENST00000347691 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
TRAPPC6B-202ENST00000347691 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
TRAPPC6B-202ENST00000347691 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
TRAPPC6B-202ENST00000347691 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
TRAPPC6B-202ENST00000347691 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
TRAPPC6B-202ENST00000347691 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
TRAPPC6B-202ENST00000347691 SOGA1O94964 1423 aa15.22■□□□□ 0.03
TRAPPC6B-202ENST00000347691 MYT1Q01538 1121 aa15.22■□□□□ 0.03
TRAPPC6B-202ENST00000347691 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
TRAPPC6B-202ENST00000347691 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC6B-202ENST00000347691 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
TRAPPC6B-202ENST00000347691 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TRAPPC6B-202ENST00000347691 KIF21BO75037 1637 aa15.16■□□□□ 0.02
TRAPPC6B-202ENST00000347691 GTF3C3Q9Y5Q9 886 aa15.15■□□□□ 0.02
TRAPPC6B-202ENST00000347691 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
TRAPPC6B-202ENST00000347691 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
TRAPPC6B-202ENST00000347691 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
TRAPPC6B-202ENST00000347691 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0.01
TRAPPC6B-202ENST00000347691 CLIP1P30622 1438 aa15.04■□□□□ -0
TRAPPC6B-202ENST00000347691 VPS8Q8N3P4 1428 aa15.04■□□□□ -0
TRAPPC6B-202ENST00000347691 APLP2Q06481 763 aa15.01□□□□□ -0.01
TRAPPC6B-202ENST00000347691 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
TRAPPC6B-202ENST00000347691 BICRAQ9NZM4 1560 aa14.97□□□□□ -0.01
TRAPPC6B-202ENST00000347691 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
TRAPPC6B-202ENST00000347691 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
TRAPPC6B-202ENST00000347691 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
TRAPPC6B-202ENST00000347691 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
TRAPPC6B-202ENST00000347691 TOP2BQ02880 1626 aa14.89□□□□□ -0.03
TRAPPC6B-202ENST00000347691 MIER1Q8N108 512 aa14.88□□□□□ -0.03
TRAPPC6B-202ENST00000347691 RAPGEF2Q9Y4G8 1499 aa14.88□□□□□ -0.03
TRAPPC6B-202ENST00000347691 YTHDC1Q96MU7 727 aaKnown RBP14.87□□□□□ -0.03
TRAPPC6B-202ENST00000347691 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
TRAPPC6B-202ENST00000347691 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAPPC6B-202ENST00000347691 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
TRAPPC6B-202ENST00000347691 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
TRAPPC6B-202ENST00000347691 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
TRAPPC6B-202ENST00000347691 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
TRAPPC6B-202ENST00000347691 CUX2O14529 1486 aa14.73□□□□□ -0.05
TRAPPC6B-202ENST00000347691 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
TRAPPC6B-202ENST00000347691 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
TRAPPC6B-202ENST00000347691 RANGAP1P46060 587 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC6B-202ENST00000347691 CCNB3Q8WWL7 1395 aa14.63□□□□□ -0.07
TRAPPC6B-202ENST00000347691 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
TRAPPC6B-202ENST00000347691 CUX1P39880 1505 aa14.61□□□□□ -0.07
TRAPPC6B-202ENST00000347691 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
TRAPPC6B-202ENST00000347691 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC6B-202ENST00000347691 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
TRAPPC6B-202ENST00000347691 SUPT16HQ9Y5B9 1047 aaKnown RBP14.57□□□□□ -0.08
TRAPPC6B-202ENST00000347691 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
TRAPPC6B-202ENST00000347691 CFTRP13569 1480 aa14.54□□□□□ -0.08
TRAPPC6B-202ENST00000347691 TIAM1Q13009 1591 aa14.52□□□□□ -0.08
TRAPPC6B-202ENST00000347691 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
TRAPPC6B-202ENST00000347691 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
TRAPPC6B-202ENST00000347691 SETD5Q9C0A6 1442 aa14.48□□□□□ -0.09
TRAPPC6B-202ENST00000347691 MAPKBP1O60336 1514 aa14.47□□□□□ -0.09
TRAPPC6B-202ENST00000347691 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
TRAPPC6B-202ENST00000347691 LRRC9Q6ZRR7 1453 aa14.45□□□□□ -0.1
TRAPPC6B-202ENST00000347691 CFAP43Q8NDM7 1665 aa14.44□□□□□ -0.1
TRAPPC6B-202ENST00000347691 IGF1RP08069 1367 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms