RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
VCAM1-202ENST00000347652 ERICH6Q7L0X2 663 aa8.48□□□□□ -1.05
VCAM1-202ENST00000347652 PELP1Q8IZL8 1130 aaKnown RBP8.48□□□□□ -1.05
VCAM1-202ENST00000347652 WDR97A6NE52 1622 aa8.48□□□□□ -1.05
VCAM1-202ENST00000347652 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
VCAM1-202ENST00000347652 PPP4R3CPQ6ZMV5 832 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 DNAJC5Q9H3Z4 198 aa8.45□□□□□ -1.06
VCAM1-202ENST00000347652 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
VCAM1-202ENST00000347652 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
VCAM1-202ENST00000347652 SNAPC4Q5SXM2 1469 aa8.43□□□□□ -1.06
VCAM1-202ENST00000347652 GAPVD1Q14C86 1478 aa8.43□□□□□ -1.06
VCAM1-202ENST00000347652 PBRM1Q86U86 1689 aa8.42□□□□□ -1.06
VCAM1-202ENST00000347652 CHD1O14646 1710 aa8.41□□□□□ -1.06
VCAM1-202ENST00000347652 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
VCAM1-202ENST00000347652 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
VCAM1-202ENST00000347652 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
VCAM1-202ENST00000347652 TRIM26Q12899 539 aaPredicted RBP8.39□□□□□ -1.07
VCAM1-202ENST00000347652 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
VCAM1-202ENST00000347652 RUSC2Q8N2Y8 1516 aa8.37□□□□□ -1.07
VCAM1-202ENST00000347652 MAGI1Q96QZ7 1491 aaPredicted RBP8.37□□□□□ -1.07
VCAM1-202ENST00000347652 CHMP7Q8WUX9 453 aaPredicted RBP8.36□□□□□ -1.07
VCAM1-202ENST00000347652 SYNJ2O15056 1496 aa8.35□□□□□ -1.07
VCAM1-202ENST00000347652 ADAMTS12P58397 1594 aa8.35□□□□□ -1.07
VCAM1-202ENST00000347652 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
VCAM1-202ENST00000347652 SENP3Q9H4L4 574 aaPredicted RBP8.34□□□□□ -1.07
VCAM1-202ENST00000347652 ERICH3Q5RHP9 1530 aa8.34□□□□□ -1.08
VCAM1-202ENST00000347652 KIF27Q86VH2 1401 aa8.33□□□□□ -1.08
VCAM1-202ENST00000347652 IGF1RP08069 1367 aa8.33□□□□□ -1.08
VCAM1-202ENST00000347652 FOXD4L1Q9NU39 408 aa8.33□□□□□ -1.08
VCAM1-202ENST00000347652 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
VCAM1-202ENST00000347652 EEA1Q15075 1411 aa8.31□□□□□ -1.08
VCAM1-202ENST00000347652 FHAD1B1AJZ9 1412 aa8.31□□□□□ -1.08
VCAM1-202ENST00000347652 CEP170Q5SW79 1584 aa8.3□□□□□ -1.08
VCAM1-202ENST00000347652 CLASP1Q7Z460 1538 aa8.29□□□□□ -1.08
VCAM1-202ENST00000347652 HRCP23327 699 aa8.29□□□□□ -1.08
VCAM1-202ENST00000347652 EIF5BO60841 1220 aaKnown RBP8.28□□□□□ -1.08
VCAM1-202ENST00000347652 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
VCAM1-202ENST00000347652 RIMBP3CA6NJZ7 1639 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 RIMBP3BA6NNM3 1639 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 RIMBP3Q9UFD9 1639 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 ARHGEF11O15085 1522 aa8.28□□□□□ -1.08
VCAM1-202ENST00000347652 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.08
VCAM1-202ENST00000347652 NUP160Q12769 1436 aa8.27□□□□□ -1.09
VCAM1-202ENST00000347652 CUL7Q14999 1698 aa8.26□□□□□ -1.09
VCAM1-202ENST00000347652 ERCC6L2Q5T890 1561 aa8.26□□□□□ -1.09
VCAM1-202ENST00000347652 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
VCAM1-202ENST00000347652 MYT1Q01538 1121 aa8.23□□□□□ -1.09
VCAM1-202ENST00000347652 ARAP1Q96P48 1450 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 LOC105371045A0A1W2PR82 267 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 CYB5RLQ6IPT4 315 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 KIF21BO75037 1637 aa8.22□□□□□ -1.09
VCAM1-202ENST00000347652 RAPGEF2Q9Y4G8 1499 aa8.21□□□□□ -1.09
VCAM1-202ENST00000347652 PLEKHG5O94827 1062 aa8.21□□□□□ -1.1
VCAM1-202ENST00000347652 SHROOM2Q13796 1616 aa8.2□□□□□ -1.1
VCAM1-202ENST00000347652 JPH4Q96JJ6 628 aa8.2□□□□□ -1.1
VCAM1-202ENST00000347652 KIAA0586Q9BVV6 1533 aa8.18□□□□□ -1.1
VCAM1-202ENST00000347652 PRG4Q92954 1404 aaPredicted RBP8.18□□□□□ -1.1
VCAM1-202ENST00000347652 GOLGA3Q08378 1498 aa8.18□□□□□ -1.1
VCAM1-202ENST00000347652 PAXIP1Q6ZW49 1069 aaPredicted RBP8.17□□□□□ -1.1
VCAM1-202ENST00000347652 CFAP44Q96MT7 982 aa8.17□□□□□ -1.1
VCAM1-202ENST00000347652 TSHZ2Q9NRE2 1034 aa8.17□□□□□ -1.1
VCAM1-202ENST00000347652 IQGAP2Q13576 1575 aa8.16□□□□□ -1.1
VCAM1-202ENST00000347652 CTTNBP2Q8WZ74 1663 aa8.14□□□□□ -1.11
VCAM1-202ENST00000347652 TNIKQ9UKE5 1360 aa8.13□□□□□ -1.11
VCAM1-202ENST00000347652 DISP1Q96F81 1524 aa8.12□□□□□ -1.11
VCAM1-202ENST00000347652 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
VCAM1-202ENST00000347652 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
VCAM1-202ENST00000347652 UGGT2Q9NYU1 1516 aa8.11□□□□□ -1.11
VCAM1-202ENST00000347652 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
VCAM1-202ENST00000347652 P3H3Q8IVL6 736 aa8.1□□□□□ -1.11
VCAM1-202ENST00000347652 KIAA0556O60303 1618 aa8.09□□□□□ -1.11
VCAM1-202ENST00000347652 PKD2Q13563 968 aa8.08□□□□□ -1.12
VCAM1-202ENST00000347652 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 PTPRGP23470 1445 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 CARMIL2Q6F5E8 1435 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 NBR1Q14596 966 aa8.07□□□□□ -1.12
VCAM1-202ENST00000347652 CEP162Q5TB80 1403 aa8.05□□□□□ -1.12
VCAM1-202ENST00000347652 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
VCAM1-202ENST00000347652 PLB1Q6P1J6 1458 aa8.04□□□□□ -1.12
VCAM1-202ENST00000347652 FHOD3Q2V2M9 1422 aa8.04□□□□□ -1.12
VCAM1-202ENST00000347652 CLIP1P30622 1438 aa8.03□□□□□ -1.12
VCAM1-202ENST00000347652 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
VCAM1-202ENST00000347652 ARHGAP35Q9NRY4 1499 aa8.03□□□□□ -1.12
VCAM1-202ENST00000347652 ARID3CA6NKF2 412 aa8.02□□□□□ -1.12
VCAM1-202ENST00000347652 UACAQ9BZF9 1416 aa8.02□□□□□ -1.13
VCAM1-202ENST00000347652 ABCC2Q92887 1545 aa8□□□□□ -1.13
VCAM1-202ENST00000347652 ABCA8O94911 1581 aa8□□□□□ -1.13
VCAM1-202ENST00000347652 UHRF1BP1LA0JNW5 1464 aa7.98□□□□□ -1.13
VCAM1-202ENST00000347652 ZCCHC11Q5TAX3 1644 aaKnown RBP7.98□□□□□ -1.13
VCAM1-202ENST00000347652 KIF13AQ9H1H9 1805 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 KDM5BQ9UGL1 1544 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 IGSF3O75054 1194 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 ARID3AQ99856 593 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.97□□□□□ -1.13
VCAM1-202ENST00000347652 MAPKBP1O60336 1514 aa7.97□□□□□ -1.13
VCAM1-202ENST00000347652 ASXL2Q76L83 1435 aa7.96□□□□□ -1.14
VCAM1-202ENST00000347652 RAPGEF6Q8TEU7 1601 aa7.96□□□□□ -1.14
VCAM1-202ENST00000347652 NUP153P49790 1475 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms