RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
LIN28B-201ENST00000345080 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
LIN28B-201ENST00000345080 NEFMP07197 916 aa10.34□□□□□ -0.75
LIN28B-201ENST00000345080 C14orf37Q86TY3 774 aa10.34□□□□□ -0.75
LIN28B-201ENST00000345080 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
LIN28B-201ENST00000345080 PDS5BQ9NTI5 1447 aa10.31□□□□□ -0.76
LIN28B-201ENST00000345080 ARID3AQ99856 593 aa10.31□□□□□ -0.76
LIN28B-201ENST00000345080 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
LIN28B-201ENST00000345080 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
LIN28B-201ENST00000345080 MIER1Q8N108 512 aa10.29□□□□□ -0.76
LIN28B-201ENST00000345080 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
LIN28B-201ENST00000345080 HSP90AA1P07900 732 aaKnown RBP10.28□□□□□ -0.76
LIN28B-201ENST00000345080 TNIKQ9UKE5 1360 aa10.27□□□□□ -0.77
LIN28B-201ENST00000345080 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
LIN28B-201ENST00000345080 TNNT3P45378 269 aaPredicted RBP10.26□□□□□ -0.77
LIN28B-201ENST00000345080 FANCIQ9NVI1 1328 aa10.26□□□□□ -0.77
LIN28B-201ENST00000345080 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
LIN28B-201ENST00000345080 PPP1R15AO75807 674 aaPredicted RBP10.25□□□□□ -0.77
LIN28B-201ENST00000345080 CECR2Q9BXF3 1484 aa10.25□□□□□ -0.77
LIN28B-201ENST00000345080 ITGAEP38570 1179 aa10.24□□□□□ -0.77
LIN28B-201ENST00000345080 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
LIN28B-201ENST00000345080 DNTTIP2Q5QJE6 756 aaKnown RBP10.24□□□□□ -0.77
LIN28B-201ENST00000345080 USP35Q9P2H5 1018 aa10.23□□□□□ -0.77
LIN28B-201ENST00000345080 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
LIN28B-201ENST00000345080 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
LIN28B-201ENST00000345080 CEP162Q5TB80 1403 aa10.21□□□□□ -0.77
LIN28B-201ENST00000345080 CALRP27797 417 aaKnown RBP10.21□□□□□ -0.78
LIN28B-201ENST00000345080 TRIM52Q96A61 297 aa10.2□□□□□ -0.78
LIN28B-201ENST00000345080 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
LIN28B-201ENST00000345080 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
LIN28B-201ENST00000345080 APPP05067 770 aa10.19□□□□□ -0.78
LIN28B-201ENST00000345080 PPP4R2Q9NY27 417 aa10.18□□□□□ -0.78
LIN28B-201ENST00000345080 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
LIN28B-201ENST00000345080 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
LIN28B-201ENST00000345080 CLIP1P30622 1438 aa10.16□□□□□ -0.78
LIN28B-201ENST00000345080 A0A0G2JS52 829 aa10.15□□□□□ -0.79
LIN28B-201ENST00000345080 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
LIN28B-201ENST00000345080 FAM50AQ14320 339 aaKnown RBP10.13□□□□□ -0.79
LIN28B-201ENST00000345080 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
LIN28B-201ENST00000345080 PLEKHD1A6NEE1 506 aa10.13□□□□□ -0.79
LIN28B-201ENST00000345080 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
LIN28B-201ENST00000345080 PHF23Q9BUL5 403 aaPredicted RBP10.13□□□□□ -0.79
LIN28B-201ENST00000345080 PTMAP06454 111 aaKnown RBP10.12□□□□□ -0.79
LIN28B-201ENST00000345080 HSP90AA2PQ14568 343 aaPredicted RBP10.12□□□□□ -0.79
LIN28B-201ENST00000345080 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
LIN28B-201ENST00000345080 BECN1Q14457 450 aa10.11□□□□□ -0.79
LIN28B-201ENST00000345080 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
LIN28B-201ENST00000345080 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
LIN28B-201ENST00000345080 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 PTMSP20962 102 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■■■□ 21.1
LIN28B-201ENST00000345080 TONSLQ96HA7 1378 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 MEX3CQ5U5Q3 659 aaKnown RBP10.08□□□□□ -0.8
LIN28B-201ENST00000345080 HNRNPUQ00839 825 aaKnown RBP eCLIP10.08□□□□□ -0.8
LIN28B-201ENST00000345080 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
LIN28B-201ENST00000345080 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
LIN28B-201ENST00000345080 CARMIL2Q6F5E8 1435 aa10.07□□□□□ -0.8
LIN28B-201ENST00000345080 PNNQ9H307 717 aaKnown RBP10.07□□□□□ -0.8
LIN28B-201ENST00000345080 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
LIN28B-201ENST00000345080 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
LIN28B-201ENST00000345080 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
LIN28B-201ENST00000345080 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
LIN28B-201ENST00000345080 PDE4CQ08493 712 aa10.02□□□□□ -0.81
LIN28B-201ENST00000345080 VPS8Q8N3P4 1428 aa10.01□□□□□ -0.81
LIN28B-201ENST00000345080 KANK1Q14678 1352 aa9.99□□□□□ -0.81
LIN28B-201ENST00000345080 MAP7D2Q96T17 732 aa9.99□□□□□ -0.81
LIN28B-201ENST00000345080 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
LIN28B-201ENST00000345080 TOP2AP11388 1531 aaKnown RBP9.98□□□□□ -0.81
LIN28B-201ENST00000345080 P3H3Q8IVL6 736 aa9.97□□□□□ -0.81
LIN28B-201ENST00000345080 PLCB2Q00722 1185 aa9.97□□□□□ -0.81
LIN28B-201ENST00000345080 NPHP1O15259 732 aa9.97□□□□□ -0.81
LIN28B-201ENST00000345080 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.81
LIN28B-201ENST00000345080 MTERF4Q7Z6M4 381 aaKnown RBP9.96□□□□□ -0.81
LIN28B-201ENST00000345080 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.96□□□□□ -0.81
LIN28B-201ENST00000345080 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.81
LIN28B-201ENST00000345080 GOLGA6L22H0YM25 854 aa9.96□□□□□ -0.82
LIN28B-201ENST00000345080 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
LIN28B-201ENST00000345080 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
LIN28B-201ENST00000345080 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
LIN28B-201ENST00000345080 CYB5RLQ6IPT4 315 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
LIN28B-201ENST00000345080 GSE1Q14687 1217 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 EID1Q9Y6B2 187 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
LIN28B-201ENST00000345080 EIF4G2P78344 907 aaKnown RBP eCLIP9.94□□□□□ -0.82
LIN28B-201ENST00000345080 DDX10Q13206 875 aaKnown RBP9.94□□□□□ -0.82
LIN28B-201ENST00000345080 FHAD1B1AJZ9 1412 aa9.93□□□□□ -0.82
LIN28B-201ENST00000345080 TCERG1O14776 1098 aaKnown RBP9.93□□□□□ -0.82
LIN28B-201ENST00000345080 PATL2C9JE40 543 aaKnown RBP9.92□□□□□ -0.82
LIN28B-201ENST00000345080 TPM2P07951 284 aa9.92□□□□□ -0.82
LIN28B-201ENST00000345080 HMGB2P26583 209 aaKnown RBP9.92□□□□□ -0.82
LIN28B-201ENST00000345080 MLECQ14165 292 aa9.91□□□□□ -0.82
LIN28B-201ENST00000345080 CCNB3Q8WWL7 1395 aa9.91□□□□□ -0.82
LIN28B-201ENST00000345080 CHAF1AQ13111 956 aaPredicted RBP9.91□□□□□ -0.82
LIN28B-201ENST00000345080 MAPK8IP2Q13387 824 aaPredicted RBP9.9□□□□□ -0.82
LIN28B-201ENST00000345080 CCDC9Q9Y3X0 531 aaKnown RBP9.9□□□□□ -0.82
LIN28B-201ENST00000345080 MROH2BQ7Z745 1585 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms