RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 NUP160Q12769 1436 aa38.15■■■■□ 3.7
NR6A1-201ENST00000344523 RANGAP1P46060 587 aaPredicted RBP38.04■■■■□ 3.68
NR6A1-201ENST00000344523 KIAA0586Q9BVV6 1533 aa38.01■■■■□ 3.67
NR6A1-201ENST00000344523 CLASP1Q7Z460 1538 aa37.94■■■■□ 3.66
NR6A1-201ENST00000344523 TNIKQ9UKE5 1360 aa37.92■■■■□ 3.66
NR6A1-201ENST00000344523 JPH4Q96JJ6 628 aa37.91■■■■□ 3.66
NR6A1-201ENST00000344523 CTTNBP2Q8WZ74 1663 aa37.91■■■■□ 3.66
NR6A1-201ENST00000344523 IQGAP2Q13576 1575 aa37.89■■■■□ 3.66
NR6A1-201ENST00000344523 PRG4Q92954 1404 aaPredicted RBP37.74■■■■□ 3.63
NR6A1-201ENST00000344523 P3H3Q8IVL6 736 aa37.73■■■■□ 3.63
NR6A1-201ENST00000344523 UGGT2Q9NYU1 1516 aa37.69■■■■□ 3.62
NR6A1-201ENST00000344523 SHROOM2Q13796 1616 aa37.69■■■■□ 3.62
NR6A1-201ENST00000344523 CEP162Q5TB80 1403 aa37.66■■■■□ 3.62
NR6A1-201ENST00000344523 ERCC6L2Q5T890 1561 aa37.65■■■■□ 3.62
NR6A1-201ENST00000344523 DISP1Q96F81 1524 aa37.63■■■■□ 3.61
NR6A1-201ENST00000344523 CLIP1P30622 1438 aa37.62■■■■□ 3.61
NR6A1-201ENST00000344523 TTBK1Q5TCY1 1321 aaPredicted RBP37.62■■■■□ 3.61
NR6A1-201ENST00000344523 CARMIL2Q6F5E8 1435 aa37.58■■■■□ 3.61
NR6A1-201ENST00000344523 ARHGAP35Q9NRY4 1499 aa37.56■■■■□ 3.6
NR6A1-201ENST00000344523 KIAA0556O60303 1618 aa37.52■■■■□ 3.6
NR6A1-201ENST00000344523 SAMD9Q5K651 1589 aa37.51■■■■□ 3.6
NR6A1-201ENST00000344523 FHOD3Q2V2M9 1422 aa37.51■■■■□ 3.6
NR6A1-201ENST00000344523 ARHGEF11O15085 1522 aa37.51■■■■□ 3.6
NR6A1-201ENST00000344523 DNAJC5Q9H3Z4 198 aa37.5■■■■□ 3.59
NR6A1-201ENST00000344523 EFCAB5A4FU69 1503 aa37.47■■■■□ 3.59
NR6A1-201ENST00000344523 ARAP1Q96P48 1450 aa37.42■■■■□ 3.58
NR6A1-201ENST00000344523 RIMBP3CA6NJZ7 1639 aa37.41■■■■□ 3.58
NR6A1-201ENST00000344523 RIMBP3BA6NNM3 1639 aa37.41■■■■□ 3.58
NR6A1-201ENST00000344523 RIMBP3Q9UFD9 1639 aa37.41■■■■□ 3.58
NR6A1-201ENST00000344523 PTPRGP23470 1445 aa37.38■■■■□ 3.57
NR6A1-201ENST00000344523 CYB5RLQ6IPT4 315 aa37.31■■■■□ 3.56
NR6A1-201ENST00000344523 PLB1Q6P1J6 1458 aa37.2■■■■□ 3.55
NR6A1-201ENST00000344523 FMN1Q68DA7 1419 aa37.19■■■■□ 3.54
NR6A1-201ENST00000344523 ATP1B4Q9UN42 357 aaPredicted RBP37.19■■■■□ 3.54
NR6A1-201ENST00000344523 ARID3CA6NKF2 412 aa37.13■■■■□ 3.53
NR6A1-201ENST00000344523 UACAQ9BZF9 1416 aa37.11■■■■□ 3.53
NR6A1-201ENST00000344523 VPS8Q8N3P4 1428 aa37.1■■■■□ 3.53
NR6A1-201ENST00000344523 ABCA8O94911 1581 aa37.06■■■■□ 3.52
NR6A1-201ENST00000344523 PCF11O94913 1555 aaKnown RBP37.02■■■■□ 3.52
NR6A1-201ENST00000344523 RAPGEF6Q8TEU7 1601 aa37.02■■■■□ 3.52
NR6A1-201ENST00000344523 CASKIN1Q8WXD9 1431 aa37.01■■■■□ 3.52
NR6A1-201ENST00000344523 ABCC2Q92887 1545 aa36.98■■■■□ 3.51
NR6A1-201ENST00000344523 ADCY10Q96PN6 1610 aa36.97■■■■□ 3.51
NR6A1-201ENST00000344523 NUP153P49790 1475 aaKnown RBP36.96■■■■□ 3.51
NR6A1-201ENST00000344523 UHRF1BP1LA0JNW5 1464 aa36.94■■■■□ 3.5
NR6A1-201ENST00000344523 FYCO1Q9BQS8 1478 aa36.93■■■■□ 3.5
NR6A1-201ENST00000344523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.92■■■■□ 3.5
NR6A1-201ENST00000344523 HNRNPUL2Q1KMD3 747 aaKnown RBP36.92■■■■□ 3.5
NR6A1-201ENST00000344523 HECW1Q76N89 1606 aa36.87■■■■□ 3.49
NR6A1-201ENST00000344523 ATP10BO94823 1461 aa36.86■■■■□ 3.49
NR6A1-201ENST00000344523 NPM1P06748 294 aaKnown RBP eCLIP36.85■■■■□ 3.49
NR6A1-201ENST00000344523 CDK13Q14004 1512 aaKnown RBP36.85■■■■□ 3.49
NR6A1-201ENST00000344523 EPRSP07814 1512 aaKnown RBP36.84■■■■□ 3.49
NR6A1-201ENST00000344523 KDM5BQ9UGL1 1544 aa36.8■■■■□ 3.48
NR6A1-201ENST00000344523 LRRIQ1Q96JM4 1722 aa36.78■■■■□ 3.48
NR6A1-201ENST00000344523 APLP2Q06481 763 aa36.77■■■■□ 3.48
NR6A1-201ENST00000344523 ZCCHC11Q5TAX3 1644 aaKnown RBP36.74■■■■□ 3.47
NR6A1-201ENST00000344523 CCDC18Q5T9S5 1454 aa36.71■■■■□ 3.47
NR6A1-201ENST00000344523 PPARGC1BQ86YN6 1023 aaKnown RBP36.69■■■■□ 3.46
NR6A1-201ENST00000344523 KANK4Q5T7N3 995 aaPredicted RBP36.66■■■■□ 3.46
NR6A1-201ENST00000344523 PLEKHD1A6NEE1 506 aa36.65■■■■□ 3.46
NR6A1-201ENST00000344523 CDK11AQ9UQ88 783 aaPredicted RBP36.63■■■■□ 3.45
NR6A1-201ENST00000344523 TIAM1Q13009 1591 aa36.63■■■■□ 3.45
NR6A1-201ENST00000344523 ASXL2Q76L83 1435 aa36.62■■■■□ 3.45
NR6A1-201ENST00000344523 KCNH8Q96L42 1107 aa36.6■■■■□ 3.45
NR6A1-201ENST00000344523 MAGI3Q5TCQ9 1506 aa36.58■■■■□ 3.45
NR6A1-201ENST00000344523 MTUS2Q5JR59 1369 aa36.56■■■■□ 3.44
NR6A1-201ENST00000344523 CFAP43Q8NDM7 1665 aa36.55■■■■□ 3.44
NR6A1-201ENST00000344523 MAP3K1Q13233 1512 aa36.55■■■■□ 3.44
NR6A1-201ENST00000344523 LRRC9Q6ZRR7 1453 aa36.51■■■■□ 3.43
NR6A1-201ENST00000344523 WDR7Q9Y4E6 1490 aa36.51■■■■□ 3.43
NR6A1-201ENST00000344523 MAPKBP1O60336 1514 aa36.49■■■■□ 3.43
NR6A1-201ENST00000344523 TROQ12816 1431 aaPredicted RBP36.49■■■■□ 3.43
NR6A1-201ENST00000344523 EHBP1L1Q8N3D4 1523 aa36.38■■■■□ 3.41
NR6A1-201ENST00000344523 KIF14Q15058 1648 aa36.35■■■■□ 3.41
NR6A1-201ENST00000344523 FAM69CQ0P6D2 419 aa36.35■■■■□ 3.41
NR6A1-201ENST00000344523 ABCC10Q5T3U5 1492 aa36.3■■■■□ 3.4
NR6A1-201ENST00000344523 TRHP20396 242 aaPredicted RBP36.29■■■■□ 3.4
NR6A1-201ENST00000344523 NCOA2Q15596 1464 aa36.28■■■■□ 3.4
NR6A1-201ENST00000344523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.26■■■■□ 3.39
NR6A1-201ENST00000344523 DIP2BQ9P265 1576 aa36.24■■■■□ 3.39
NR6A1-201ENST00000344523 SUPT6HQ7KZ85 1726 aaKnown RBP36.23■■■■□ 3.39
NR6A1-201ENST00000344523 TTC37Q6PGP7 1564 aa36.21■■■■□ 3.39
NR6A1-201ENST00000344523 CCNB3Q8WWL7 1395 aa36.19■■■■□ 3.38
NR6A1-201ENST00000344523 PHLDB1Q86UU1 1377 aa36.18■■■■□ 3.38
NR6A1-201ENST00000344523 CD109Q6YHK3 1445 aa36.14■■■■□ 3.38
NR6A1-201ENST00000344523 ABCA9Q8IUA7 1624 aa36.14■■■■□ 3.38
NR6A1-201ENST00000344523 GLI2P10070 1586 aa36.13■■■■□ 3.37
NR6A1-201ENST00000344523 GPATCH8Q9UKJ3 1502 aaKnown RBP36.11■■■■□ 3.37
NR6A1-201ENST00000344523 KIF13AQ9H1H9 1805 aa36.1■■■■□ 3.37
NR6A1-201ENST00000344523 CFDP1Q9UEE9 299 aaPredicted RBP36.07■■■■□ 3.36
NR6A1-201ENST00000344523 PLCH2O75038 1416 aa36.06■■■■□ 3.36
NR6A1-201ENST00000344523 ZNF777Q9ULD5 760 aaPredicted RBP36.05■■■■□ 3.36
NR6A1-201ENST00000344523 MYOM3Q5VTT5 1437 aa36.04■■■■□ 3.36
NR6A1-201ENST00000344523 MAP3K4Q9Y6R4 1608 aa36.03■■■■□ 3.36
NR6A1-201ENST00000344523 CDC42BPAQ5VT25 1732 aa36.01■■■■□ 3.35
NR6A1-201ENST00000344523 ARHGAP5Q13017 1502 aa35.99■■■■□ 3.35
NR6A1-201ENST00000344523 ZNF644Q9H582 1327 aaPredicted RBP35.99■■■■□ 3.35
NR6A1-201ENST00000344523 MYO5CQ9NQX4 1742 aa35.99■■■■□ 3.35
NR6A1-201ENST00000344523 TSPOAP1O95153 1857 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms