RNA–Protein interactions for RNA: ENST00000342628.6

FOXM1-201, Transcript of forkhead box M1, humanhuman

TSL 1 (best) BASIC

Gene FOXM1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-201ENST00000342628 NUP160Q12769 1436 aa13.19□□□□□ -0.3
FOXM1-201ENST00000342628 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
FOXM1-201ENST00000342628 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
FOXM1-201ENST00000342628 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
FOXM1-201ENST00000342628 KIAA0586Q9BVV6 1533 aa13.18□□□□□ -0.3
FOXM1-201ENST00000342628 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
FOXM1-201ENST00000342628 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
FOXM1-201ENST00000342628 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
FOXM1-201ENST00000342628 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
FOXM1-201ENST00000342628 CARMIL2Q6F5E8 1435 aa13.08□□□□□ -0.32
FOXM1-201ENST00000342628 CLIP1P30622 1438 aa13.08□□□□□ -0.32
FOXM1-201ENST00000342628 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
FOXM1-201ENST00000342628 UGGT2Q9NYU1 1516 aa13.06□□□□□ -0.32
FOXM1-201ENST00000342628 PRG4Q92954 1404 aaPredicted RBP13.06□□□□□ -0.32
FOXM1-201ENST00000342628 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
FOXM1-201ENST00000342628 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
FOXM1-201ENST00000342628 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
FOXM1-201ENST00000342628 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.33
FOXM1-201ENST00000342628 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
FOXM1-201ENST00000342628 KIAA0556O60303 1618 aa13□□□□□ -0.33
FOXM1-201ENST00000342628 SAMD9Q5K651 1589 aa13□□□□□ -0.33
FOXM1-201ENST00000342628 DISP1Q96F81 1524 aa12.99□□□□□ -0.33
FOXM1-201ENST00000342628 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
FOXM1-201ENST00000342628 PTPRGP23470 1445 aa12.96□□□□□ -0.33
FOXM1-201ENST00000342628 FMN1Q68DA7 1419 aa12.95□□□□□ -0.34
FOXM1-201ENST00000342628 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
FOXM1-201ENST00000342628 ARHGEF11O15085 1522 aa12.95□□□□□ -0.34
FOXM1-201ENST00000342628 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
FOXM1-201ENST00000342628 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
FOXM1-201ENST00000342628 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
FOXM1-201ENST00000342628 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
FOXM1-201ENST00000342628 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
FOXM1-201ENST00000342628 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
FOXM1-201ENST00000342628 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.35
FOXM1-201ENST00000342628 APLP2Q06481 763 aa12.89□□□□□ -0.35
FOXM1-201ENST00000342628 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
FOXM1-201ENST00000342628 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
FOXM1-201ENST00000342628 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
FOXM1-201ENST00000342628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
FOXM1-201ENST00000342628 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
FOXM1-201ENST00000342628 CASKIN1Q8WXD9 1431 aa12.85□□□□□ -0.35
FOXM1-201ENST00000342628 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
FOXM1-201ENST00000342628 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
FOXM1-201ENST00000342628 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
FOXM1-201ENST00000342628 HECW1Q76N89 1606 aa12.83□□□□□ -0.35
FOXM1-201ENST00000342628 ABCA8O94911 1581 aa12.83□□□□□ -0.36
FOXM1-201ENST00000342628 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
FOXM1-201ENST00000342628 ARID3CA6NKF2 412 aa12.82□□□□□ -0.36
FOXM1-201ENST00000342628 ABCC2Q92887 1545 aa12.82□□□□□ -0.36
FOXM1-201ENST00000342628 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
FOXM1-201ENST00000342628 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
FOXM1-201ENST00000342628 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
FOXM1-201ENST00000342628 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
FOXM1-201ENST00000342628 EPRSP07814 1512 aaKnown RBP12.77□□□□□ -0.37
FOXM1-201ENST00000342628 ADCY10Q96PN6 1610 aa12.77□□□□□ -0.37
FOXM1-201ENST00000342628 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
FOXM1-201ENST00000342628 ATP10BO94823 1461 aa12.75□□□□□ -0.37
FOXM1-201ENST00000342628 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
FOXM1-201ENST00000342628 KDM5BQ9UGL1 1544 aa12.74□□□□□ -0.37
FOXM1-201ENST00000342628 MTUS2Q5JR59 1369 aa12.73□□□□□ -0.37
FOXM1-201ENST00000342628 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
FOXM1-201ENST00000342628 ZCCHC11Q5TAX3 1644 aaKnown RBP12.72□□□□□ -0.37
FOXM1-201ENST00000342628 TIAM1Q13009 1591 aa12.72□□□□□ -0.37
FOXM1-201ENST00000342628 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
FOXM1-201ENST00000342628 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
FOXM1-201ENST00000342628 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
FOXM1-201ENST00000342628 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
FOXM1-201ENST00000342628 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
FOXM1-201ENST00000342628 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
FOXM1-201ENST00000342628 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
FOXM1-201ENST00000342628 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
FOXM1-201ENST00000342628 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
FOXM1-201ENST00000342628 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
FOXM1-201ENST00000342628 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
FOXM1-201ENST00000342628 SUPT6HQ7KZ85 1726 aaKnown RBP12.62□□□□□ -0.39
FOXM1-201ENST00000342628 KIF14Q15058 1648 aa12.62□□□□□ -0.39
FOXM1-201ENST00000342628 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
FOXM1-201ENST00000342628 CCNB3Q8WWL7 1395 aa12.59□□□□□ -0.39
FOXM1-201ENST00000342628 NCOA2Q15596 1464 aa12.58□□□□□ -0.39
FOXM1-201ENST00000342628 FAM69CQ0P6D2 419 aa12.58□□□□□ -0.4
FOXM1-201ENST00000342628 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
FOXM1-201ENST00000342628 ABCC10Q5T3U5 1492 aa12.56□□□□□ -0.4
FOXM1-201ENST00000342628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
FOXM1-201ENST00000342628 CFDP1Q9UEE9 299 aaPredicted RBP12.54□□□□□ -0.4
FOXM1-201ENST00000342628 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
FOXM1-201ENST00000342628 CD109Q6YHK3 1445 aa12.53□□□□□ -0.4
FOXM1-201ENST00000342628 GLI2P10070 1586 aa12.53□□□□□ -0.4
FOXM1-201ENST00000342628 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
FOXM1-201ENST00000342628 ITSN2Q9NZM3 1697 aa12.52□□□□□ -0.4
FOXM1-201ENST00000342628 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
FOXM1-201ENST00000342628 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
FOXM1-201ENST00000342628 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.41
FOXM1-201ENST00000342628 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.41
FOXM1-201ENST00000342628 PHLDB1Q86UU1 1377 aa12.52□□□□□ -0.41
FOXM1-201ENST00000342628 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.41
FOXM1-201ENST00000342628 GPATCH8Q9UKJ3 1502 aaKnown RBP12.51□□□□□ -0.41
FOXM1-201ENST00000342628 PLCH2O75038 1416 aa12.5□□□□□ -0.41
FOXM1-201ENST00000342628 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
FOXM1-201ENST00000342628 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
FOXM1-201ENST00000342628 FAM50AQ14320 339 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms