RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 ARHGAP35Q9NRY4 1499 aa28.44■■■□□ 2.14
UBC-201ENST00000339647 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
UBC-201ENST00000339647 CCER2I3L3R5 266 aa28.44■■■□□ 2.14
UBC-201ENST00000339647 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
UBC-201ENST00000339647 ANP32CO43423 234 aa28.41■■■□□ 2.14
UBC-201ENST00000339647 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
UBC-201ENST00000339647 FAM50AQ14320 339 aaKnown RBP28.29■■■□□ 2.12
UBC-201ENST00000339647 KIF27Q86VH2 1401 aa28.29■■■□□ 2.12
UBC-201ENST00000339647 IRX6P78412 446 aaPredicted RBP28.26■■■□□ 2.12
UBC-201ENST00000339647 FANCIQ9NVI1 1328 aa28.26■■■□□ 2.11
UBC-201ENST00000339647 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.11
UBC-201ENST00000339647 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
UBC-201ENST00000339647 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
UBC-201ENST00000339647 TIMELESSQ9UNS1 1208 aa28.24■■■□□ 2.11
UBC-201ENST00000339647 CUX1P39880 1505 aa28.23■■■□□ 2.11
UBC-201ENST00000339647 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
UBC-201ENST00000339647 CDK11AQ9UQ88 783 aaPredicted RBP28.2■■■□□ 2.11
UBC-201ENST00000339647 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.11
UBC-201ENST00000339647 ERICH6Q7L0X2 663 aa28.18■■■□□ 2.1
UBC-201ENST00000339647 LRRC9Q6ZRR7 1453 aa28.17■■■□□ 2.1
UBC-201ENST00000339647 HNRNPUQ00839 825 aaKnown RBP eCLIP28.15■■■□□ 2.1
UBC-201ENST00000339647 MAP3K1Q13233 1512 aa28.13■■■□□ 2.09
UBC-201ENST00000339647 TONSLQ96HA7 1378 aa28.03■■■□□ 2.08
UBC-201ENST00000339647 ATP1B4Q9UN42 357 aaPredicted RBP28.02■■■□□ 2.08
UBC-201ENST00000339647 CFTRP13569 1480 aa28.01■■■□□ 2.07
UBC-201ENST00000339647 IGF1RP08069 1367 aa27.98■■■□□ 2.07
UBC-201ENST00000339647 P3H3Q8IVL6 736 aa27.98■■■□□ 2.07
UBC-201ENST00000339647 PPP4R2Q9NY27 417 aa27.93■■■□□ 2.06
UBC-201ENST00000339647 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
UBC-201ENST00000339647 DEKP35659 375 aaKnown RBP27.91■■■□□ 2.06
UBC-201ENST00000339647 NESP48681 1621 aa27.9■■■□□ 2.06
UBC-201ENST00000339647 CFAP43Q8NDM7 1665 aa27.88■■■□□ 2.05
UBC-201ENST00000339647 PCF11O94913 1555 aaKnown RBP27.88■■■□□ 2.05
UBC-201ENST00000339647 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
UBC-201ENST00000339647 CARMIL1Q5VZK9 1371 aa27.87■■■□□ 2.05
UBC-201ENST00000339647 ERICH6BQ5W0A0 696 aa27.86■■■□□ 2.05
UBC-201ENST00000339647 B4GALNT3Q6L9W6 998 aa27.85■■■□□ 2.05
UBC-201ENST00000339647 CCDC184Q52MB2 194 aa27.85■■■□□ 2.05
UBC-201ENST00000339647 MYT1LQ9UL68 1186 aa27.83■■■□□ 2.05
UBC-201ENST00000339647 WASHC2AQ641Q2 1341 aa27.82■■■□□ 2.04
UBC-201ENST00000339647 CCDC18Q5T9S5 1454 aa27.81■■■□□ 2.04
UBC-201ENST00000339647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.041e-15■■■□□ 15.4
UBC-201ENST00000339647 HSPA5P11021 654 aaKnown RBP27.76■■■□□ 2.04
UBC-201ENST00000339647 UACAQ9BZF9 1416 aa27.76■■■□□ 2.03
UBC-201ENST00000339647 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
UBC-201ENST00000339647 KDM5BQ9UGL1 1544 aa27.74■■■□□ 2.03
UBC-201ENST00000339647 PTPRKQ15262 1439 aa27.74■■■□□ 2.03
UBC-201ENST00000339647 NBR1Q14596 966 aa27.72■■■□□ 2.03
UBC-201ENST00000339647 FAM9BQ8IZU0 186 aa27.72■■■□□ 2.03
UBC-201ENST00000339647 FGD6Q6ZV73 1430 aa27.71■■■□□ 2.03
UBC-201ENST00000339647 PAK3O75914 559 aaPredicted RBP27.7■■■□□ 2.03
UBC-201ENST00000339647 NOP58Q9Y2X3 529 aaKnown RBP27.7■■■□□ 2.03
UBC-201ENST00000339647 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.022e-11■■■■■ 51
UBC-201ENST00000339647 HFM1A2PYH4 1435 aa27.69■■■□□ 2.02
UBC-201ENST00000339647 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
UBC-201ENST00000339647 FANCD2Q9BXW9 1451 aa27.66■■■□□ 2.02
UBC-201ENST00000339647 FYCO1Q9BQS8 1478 aa27.65■■■□□ 2.02
UBC-201ENST00000339647 CASKIN1Q8WXD9 1431 aa27.62■■■□□ 2.01
UBC-201ENST00000339647 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
UBC-201ENST00000339647 NAIPQ13075 1403 aa27.62■■■□□ 2.01
UBC-201ENST00000339647 MRS2Q9HD23 443 aa27.61■■■□□ 2.01
UBC-201ENST00000339647 CNTLNQ9NXG0 1405 aa27.61■■■□□ 2.01
UBC-201ENST00000339647 PRKRIP1Q9H875 184 aaPredicted RBP27.61■■■□□ 2.01
UBC-201ENST00000339647 C11orf95C9JLR9 678 aaPredicted RBP27.6■■■□□ 2.01
UBC-201ENST00000339647 EIF4G2P78344 907 aaKnown RBP eCLIP27.6■■■□□ 2.01
UBC-201ENST00000339647 ZBED9Q6R2W3 1325 aa27.6■■■□□ 2.01
UBC-201ENST00000339647 NCOA2Q15596 1464 aa27.59■■■□□ 2.01
UBC-201ENST00000339647 PRKCSHP14314 528 aaPredicted RBP27.54■■■□□ 2
UBC-201ENST00000339647 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
UBC-201ENST00000339647 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
UBC-201ENST00000339647 PRDM2Q13029 1718 aa27.52■■■□□ 2
UBC-201ENST00000339647 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
UBC-201ENST00000339647 RRP7BPQ9NSQ0 103 aa27.49■■□□□ 1.99
UBC-201ENST00000339647 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
UBC-201ENST00000339647 EFCAB5A4FU69 1503 aa27.45■■□□□ 1.99
UBC-201ENST00000339647 AKNAQ7Z591 1439 aa27.45■■□□□ 1.98
UBC-201ENST00000339647 CHIC2Q9UKJ5 165 aa27.44■■□□□ 1.98
UBC-201ENST00000339647 DENND4BO75064 1496 aaPredicted RBP27.44■■□□□ 1.98
UBC-201ENST00000339647 NCOA1Q15788 1441 aa27.44■■□□□ 1.98
UBC-201ENST00000339647 L3MBTL2Q969R5 705 aa27.43■■□□□ 1.98
UBC-201ENST00000339647 IPO9Q96P70 1041 aaKnown RBP27.43■■□□□ 1.98
UBC-201ENST00000339647 MYOM3Q5VTT5 1437 aa27.41■■□□□ 1.98
UBC-201ENST00000339647 SNAPC4Q5SXM2 1469 aa27.4■■□□□ 1.98
UBC-201ENST00000339647 ANP32AP39687 249 aaKnown RBP27.4■■□□□ 1.98
UBC-201ENST00000339647 CCDC136Q96JN2 1154 aa27.39■■□□□ 1.98
UBC-201ENST00000339647 ANO8Q9HCE9 1232 aaPredicted RBP27.38■■□□□ 1.97
UBC-201ENST00000339647 TOPBP1Q92547 1522 aa27.37■■□□□ 1.97
UBC-201ENST00000339647 FOXD1Q16676 465 aa27.37■■□□□ 1.97
UBC-201ENST00000339647 ZBTB47Q9UFB7 747 aaPredicted RBP27.36■■□□□ 1.97
UBC-201ENST00000339647 RTL5Q5HYW3 569 aaPredicted RBP27.35■■□□□ 1.97
UBC-201ENST00000339647 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
UBC-201ENST00000339647 SMG6Q86US8 1419 aaKnown RBP27.34■■□□□ 1.97
UBC-201ENST00000339647 CNGB1Q14028 1251 aaPredicted RBP27.34■■□□□ 1.97
UBC-201ENST00000339647 SENP3-EIF4A1A0A087X0R7 540 aa27.33■■□□□ 1.97
UBC-201ENST00000339647 KIF7Q2M1P5 1343 aa27.33■■□□□ 1.97
UBC-201ENST00000339647 NBPF8Q3BBV2 869 aa27.33■■□□□ 1.96
UBC-201ENST00000339647 URB2Q14146 1524 aaKnown RBP27.33■■□□□ 1.96
UBC-201ENST00000339647 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
UBC-201ENST00000339647 MPHOSPH9Q99550 1183 aa27.32■■□□□ 1.96
UBC-201ENST00000339647 LRRIQ1Q96JM4 1722 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms