RNA–Protein interactions for RNA: ENST00000338402.6

SNRPEP3-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 3, humanhuman

BASIC

Gene SNRPEP3, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP3-201ENST00000338402 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
SNRPEP3-201ENST00000338402 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
SNRPEP3-201ENST00000338402 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
SNRPEP3-201ENST00000338402 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
SNRPEP3-201ENST00000338402 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
SNRPEP3-201ENST00000338402 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
SNRPEP3-201ENST00000338402 VSIG10Q8N0Z9 540 aa9.45□□□□□ -0.9
SNRPEP3-201ENST00000338402 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
SNRPEP3-201ENST00000338402 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
SNRPEP3-201ENST00000338402 CHRM1P11229 460 aaPredicted RBP9.41□□□□□ -0.9
SNRPEP3-201ENST00000338402 PYGBP11216 843 aa9.39□□□□□ -0.91
SNRPEP3-201ENST00000338402 VGFO15240 615 aaPredicted RBP9.38□□□□□ -0.91
SNRPEP3-201ENST00000338402 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
SNRPEP3-201ENST00000338402 TSPYL2Q9H2G4 693 aaPredicted RBP9.37□□□□□ -0.91
SNRPEP3-201ENST00000338402 STK25O00506 426 aa9.36□□□□□ -0.91
SNRPEP3-201ENST00000338402 PRKAR2AP13861 404 aaKnown RBP9.36□□□□□ -0.91
SNRPEP3-201ENST00000338402 DNAJC5Q9H3Z4 198 aa9.33□□□□□ -0.92
SNRPEP3-201ENST00000338402 TSHZ2Q9NRE2 1034 aa9.33□□□□□ -0.92
SNRPEP3-201ENST00000338402 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
SNRPEP3-201ENST00000338402 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
SNRPEP3-201ENST00000338402 STK24Q9Y6E0 443 aa9.31□□□□□ -0.92
SNRPEP3-201ENST00000338402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.3□□□□□ -0.92
SNRPEP3-201ENST00000338402 BCANQ96GW7 911 aa9.3□□□□□ -0.92
SNRPEP3-201ENST00000338402 ZFP91Q96JP5 570 aaPredicted RBP9.3□□□□□ -0.92
SNRPEP3-201ENST00000338402 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
SNRPEP3-201ENST00000338402 BCL11BQ9C0K0 894 aaPredicted RBP9.3□□□□□ -0.92
SNRPEP3-201ENST00000338402 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
SNRPEP3-201ENST00000338402 CHRDL2Q6WN34 429 aa9.28□□□□□ -0.92
SNRPEP3-201ENST00000338402 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
SNRPEP3-201ENST00000338402 ZNF467Q7Z7K2 595 aaPredicted RBP9.27□□□□□ -0.93
SNRPEP3-201ENST00000338402 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
SNRPEP3-201ENST00000338402 CCDC61Q9Y6R9 512 aa9.24□□□□□ -0.93
SNRPEP3-201ENST00000338402 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
SNRPEP3-201ENST00000338402 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
SNRPEP3-201ENST00000338402 PDAP1Q13442 181 aaKnown RBP9.21□□□□□ -0.94
SNRPEP3-201ENST00000338402 PCDHB8Q9UN66 801 aa9.21□□□□□ -0.94
SNRPEP3-201ENST00000338402 PCDHB13Q9Y5F0 798 aa9.21□□□□□ -0.94
SNRPEP3-201ENST00000338402 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
SNRPEP3-201ENST00000338402 PSEN1P49768 467 aa9.16□□□□□ -0.94
SNRPEP3-201ENST00000338402 MAP3K13O43283 966 aa9.13□□□□□ -0.95
SNRPEP3-201ENST00000338402 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
SNRPEP3-201ENST00000338402 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
SNRPEP3-201ENST00000338402 IFNL1Q8IU54 200 aa9.12□□□□□ -0.95
SNRPEP3-201ENST00000338402 KIF12Q96FN5 646 aa9.12□□□□□ -0.95
SNRPEP3-201ENST00000338402 NBR1Q14596 966 aa9.08□□□□□ -0.96
SNRPEP3-201ENST00000338402 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
SNRPEP3-201ENST00000338402 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
SNRPEP3-201ENST00000338402 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
SNRPEP3-201ENST00000338402 EFCAB3Q8N7B9 438 aa9.03□□□□□ -0.96
SNRPEP3-201ENST00000338402 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
SNRPEP3-201ENST00000338402 SOX12O15370 315 aa9.01□□□□□ -0.97
SNRPEP3-201ENST00000338402 NLRP6P59044 892 aa9.01□□□□□ -0.97
SNRPEP3-201ENST00000338402 WDR70Q9NW82 654 aa9□□□□□ -0.97
SNRPEP3-201ENST00000338402 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
SNRPEP3-201ENST00000338402 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
SNRPEP3-201ENST00000338402 C19orf67A6NJJ6 358 aa8.98□□□□□ -0.97
SNRPEP3-201ENST00000338402 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
SNRPEP3-201ENST00000338402 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
SNRPEP3-201ENST00000338402 FBXO22Q8NEZ5 403 aa8.96□□□□□ -0.98
SNRPEP3-201ENST00000338402 TMEM106CQ9BVX2 250 aa8.96□□□□□ -0.98
SNRPEP3-201ENST00000338402 P3H3Q8IVL6 736 aa8.95□□□□□ -0.98
SNRPEP3-201ENST00000338402 MS4A3Q96HJ5 214 aa8.95□□□□□ -0.98
SNRPEP3-201ENST00000338402 PPP1R37O75864 691 aa8.94□□□□□ -0.98
SNRPEP3-201ENST00000338402 MKRN3Q13064 507 aaKnown RBP8.92□□□□□ -0.98
SNRPEP3-201ENST00000338402 TRPC6Q9Y210 931 aa8.91□□□□□ -0.98
SNRPEP3-201ENST00000338402 HAX1O00165 279 aa8.88□□□□□ -0.99
SNRPEP3-201ENST00000338402 TIE1P35590 1138 aa8.88□□□□□ -0.99
SNRPEP3-201ENST00000338402 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
SNRPEP3-201ENST00000338402 MS4A4AQ96JQ5 239 aa8.86□□□□□ -0.99
SNRPEP3-201ENST00000338402 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
SNRPEP3-201ENST00000338402 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
SNRPEP3-201ENST00000338402 PDE4AP27815 886 aa8.83□□□□□ -1
SNRPEP3-201ENST00000338402 CLCN6P51797 869 aa8.82□□□□□ -1
SNRPEP3-201ENST00000338402 E2F4Q16254 413 aa8.82□□□□□ -1
SNRPEP3-201ENST00000338402 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
SNRPEP3-201ENST00000338402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -1
SNRPEP3-201ENST00000338402 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
SNRPEP3-201ENST00000338402 TRIM35Q9UPQ4 493 aa8.81□□□□□ -1
SNRPEP3-201ENST00000338402 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
SNRPEP3-201ENST00000338402 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
SNRPEP3-201ENST00000338402 EVX2Q03828 476 aa8.77□□□□□ -1.01
SNRPEP3-201ENST00000338402 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
SNRPEP3-201ENST00000338402 POTEHQ6S545 545 aa8.76□□□□□ -1.01
SNRPEP3-201ENST00000338402 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
SNRPEP3-201ENST00000338402 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
SNRPEP3-201ENST00000338402 MFSD10Q14728 455 aa8.74□□□□□ -1.01
SNRPEP3-201ENST00000338402 ILDR1Q86SU0 546 aaPredicted RBP8.74□□□□□ -1.01
SNRPEP3-201ENST00000338402 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
SNRPEP3-201ENST00000338402 ATMINO43313 823 aaPredicted RBP8.71□□□□□ -1.02
SNRPEP3-201ENST00000338402 DPY19L2Q6NUT2 758 aa8.71□□□□□ -1.02
SNRPEP3-201ENST00000338402 LMOD2Q6P5Q4 547 aa8.71□□□□□ -1.02
SNRPEP3-201ENST00000338402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNRPEP3-201ENST00000338402 G3V3G9 751 aa8.69□□□□□ -1.02
SNRPEP3-201ENST00000338402 ASTLQ6HA08 431 aaPredicted RBP8.69□□□□□ -1.02
SNRPEP3-201ENST00000338402 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
SNRPEP3-201ENST00000338402 SEMA3EO15041 775 aa8.68□□□□□ -1.02
SNRPEP3-201ENST00000338402 PPP1R15BQ5SWA1 713 aa8.68□□□□□ -1.02
SNRPEP3-201ENST00000338402 IER5LQ5T953 404 aa8.68□□□□□ -1.02
SNRPEP3-201ENST00000338402 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
SNRPEP3-201ENST00000338402 OCEL1Q9H607 264 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms