RNA–Protein interactions for RNA: ENST00000338402.6

SNRPEP3-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 3, humanhuman

BASIC

Gene SNRPEP3, Length 276 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP3-201ENST00000338402 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
SNRPEP3-201ENST00000338402 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
SNRPEP3-201ENST00000338402 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
SNRPEP3-201ENST00000338402 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
SNRPEP3-201ENST00000338402 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
SNRPEP3-201ENST00000338402 FOXD1Q16676 465 aa13.65□□□□□ -0.22
SNRPEP3-201ENST00000338402 ADRA2BP18089 450 aa13.44□□□□□ -0.26
SNRPEP3-201ENST00000338402 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
SNRPEP3-201ENST00000338402 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
SNRPEP3-201ENST00000338402 KCNA4P22459 653 aa12.77□□□□□ -0.37
SNRPEP3-201ENST00000338402 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
SNRPEP3-201ENST00000338402 MSH5O43196 834 aa12.48□□□□□ -0.41
SNRPEP3-201ENST00000338402 NCBP3Q53F19 620 aaKnown RBP12.46□□□□□ -0.41
SNRPEP3-201ENST00000338402 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
SNRPEP3-201ENST00000338402 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
SNRPEP3-201ENST00000338402 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
SNRPEP3-201ENST00000338402 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
SNRPEP3-201ENST00000338402 CNKSR2Q8WXI2 1034 aa12.23□□□□□ -0.45
SNRPEP3-201ENST00000338402 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
SNRPEP3-201ENST00000338402 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
SNRPEP3-201ENST00000338402 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
SNRPEP3-201ENST00000338402 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
SNRPEP3-201ENST00000338402 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
SNRPEP3-201ENST00000338402 HOXD11P31277 338 aaPredicted RBP11.73□□□□□ -0.53
SNRPEP3-201ENST00000338402 ZBTB22O15209 634 aa11.72□□□□□ -0.53
SNRPEP3-201ENST00000338402 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
SNRPEP3-201ENST00000338402 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
SNRPEP3-201ENST00000338402 DCAF8L1A6NGE4 600 aa11.39□□□□□ -0.59
SNRPEP3-201ENST00000338402 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
SNRPEP3-201ENST00000338402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNRPEP3-201ENST00000338402 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
SNRPEP3-201ENST00000338402 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
SNRPEP3-201ENST00000338402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
SNRPEP3-201ENST00000338402 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
SNRPEP3-201ENST00000338402 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
SNRPEP3-201ENST00000338402 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
SNRPEP3-201ENST00000338402 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
SNRPEP3-201ENST00000338402 APLP2Q06481 763 aa10.89□□□□□ -0.67
SNRPEP3-201ENST00000338402 FKBP8Q14318 412 aa10.85□□□□□ -0.67
SNRPEP3-201ENST00000338402 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
SNRPEP3-201ENST00000338402 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
SNRPEP3-201ENST00000338402 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
SNRPEP3-201ENST00000338402 SPINK5Q9NQ38 1064 aaPredicted RBP10.64□□□□□ -0.71
SNRPEP3-201ENST00000338402 CAPN15O75808 1086 aa10.63□□□□□ -0.71
SNRPEP3-201ENST00000338402 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
SNRPEP3-201ENST00000338402 POLA2Q14181 598 aa10.55□□□□□ -0.72
SNRPEP3-201ENST00000338402 FBLN2P98095 1184 aa10.54□□□□□ -0.72
SNRPEP3-201ENST00000338402 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
SNRPEP3-201ENST00000338402 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
SNRPEP3-201ENST00000338402 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
SNRPEP3-201ENST00000338402 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
SNRPEP3-201ENST00000338402 ABCB7O75027 752 aa10.44□□□□□ -0.74
SNRPEP3-201ENST00000338402 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
SNRPEP3-201ENST00000338402 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
SNRPEP3-201ENST00000338402 DSG3P32926 999 aa10.32□□□□□ -0.76
SNRPEP3-201ENST00000338402 PROM2Q8N271 834 aa10.3□□□□□ -0.76
SNRPEP3-201ENST00000338402 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
SNRPEP3-201ENST00000338402 VASPP50552 380 aaPredicted RBP10.19□□□□□ -0.78
SNRPEP3-201ENST00000338402 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
SNRPEP3-201ENST00000338402 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
SNRPEP3-201ENST00000338402 SPDYE2BA6NHP3 402 aa10.15□□□□□ -0.78
SNRPEP3-201ENST00000338402 SPDYE6P0CI01 402 aa10.15□□□□□ -0.78
SNRPEP3-201ENST00000338402 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
SNRPEP3-201ENST00000338402 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
SNRPEP3-201ENST00000338402 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
SNRPEP3-201ENST00000338402 SSUH2Q9Y2M2 353 aa10.07□□□□□ -0.8
SNRPEP3-201ENST00000338402 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNRPEP3-201ENST00000338402 STAG3Q9UJ98 1225 aa10.04□□□□□ -0.8
SNRPEP3-201ENST00000338402 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
SNRPEP3-201ENST00000338402 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
SNRPEP3-201ENST00000338402 MIER1Q8N108 512 aa9.93□□□□□ -0.82
SNRPEP3-201ENST00000338402 SPOCK2Q92563 424 aa9.92□□□□□ -0.82
SNRPEP3-201ENST00000338402 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
SNRPEP3-201ENST00000338402 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
SNRPEP3-201ENST00000338402 PKD2Q13563 968 aa9.87□□□□□ -0.83
SNRPEP3-201ENST00000338402 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
SNRPEP3-201ENST00000338402 ZBTB47Q9UFB7 747 aaPredicted RBP9.82□□□□□ -0.84
SNRPEP3-201ENST00000338402 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
SNRPEP3-201ENST00000338402 ECM2O94769 699 aaPredicted RBP9.78□□□□□ -0.84
SNRPEP3-201ENST00000338402 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
SNRPEP3-201ENST00000338402 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
SNRPEP3-201ENST00000338402 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
SNRPEP3-201ENST00000338402 PLCB2Q00722 1185 aa9.71□□□□□ -0.86
SNRPEP3-201ENST00000338402 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
SNRPEP3-201ENST00000338402 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
SNRPEP3-201ENST00000338402 RGL2O15211 777 aa9.65□□□□□ -0.86
SNRPEP3-201ENST00000338402 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
SNRPEP3-201ENST00000338402 GSE1Q14687 1217 aa9.62□□□□□ -0.87
SNRPEP3-201ENST00000338402 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
SNRPEP3-201ENST00000338402 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
SNRPEP3-201ENST00000338402 CREBZFQ9NS37 354 aa9.61□□□□□ -0.87
SNRPEP3-201ENST00000338402 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
SNRPEP3-201ENST00000338402 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
SNRPEP3-201ENST00000338402 NUBP1P53384 320 aa9.58□□□□□ -0.88
SNRPEP3-201ENST00000338402 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
SNRPEP3-201ENST00000338402 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNRPEP3-201ENST00000338402 FAM212AQ96EL1 285 aa9.55□□□□□ -0.88
SNRPEP3-201ENST00000338402 CHGAP10645 457 aaKnown RBP9.54□□□□□ -0.88
SNRPEP3-201ENST00000338402 MNX1P50219 401 aaPredicted RBP9.53□□□□□ -0.88
SNRPEP3-201ENST00000338402 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms