RNA–Protein interactions for RNA: ENST00000338017.8

SLITRK4-201, Transcript of SLIT and NTRK like family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK4, Length 3,357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK4-201ENST00000338017 SETD5Q9C0A6 1442 aa22.81■■□□□ 1.24
SLITRK4-201ENST00000338017 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
SLITRK4-201ENST00000338017 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
SLITRK4-201ENST00000338017 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
SLITRK4-201ENST00000338017 PRXQ9BXM0 1461 aa22.77■■□□□ 1.24
SLITRK4-201ENST00000338017 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.23
SLITRK4-201ENST00000338017 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
SLITRK4-201ENST00000338017 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
SLITRK4-201ENST00000338017 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
SLITRK4-201ENST00000338017 PHLDB1Q86UU1 1377 aa22.73■■□□□ 1.23
SLITRK4-201ENST00000338017 CDK11AQ9UQ88 783 aaPredicted RBP22.73■■□□□ 1.23
SLITRK4-201ENST00000338017 CUX2O14529 1486 aa22.73■■□□□ 1.23
SLITRK4-201ENST00000338017 PPP1R15AO75807 674 aaPredicted RBP22.73■■□□□ 1.23
SLITRK4-201ENST00000338017 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
SLITRK4-201ENST00000338017 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
SLITRK4-201ENST00000338017 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
SLITRK4-201ENST00000338017 CARMIL1Q5VZK9 1371 aa22.65■■□□□ 1.22
SLITRK4-201ENST00000338017 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
SLITRK4-201ENST00000338017 CUX1P39880 1505 aa22.62■■□□□ 1.21
SLITRK4-201ENST00000338017 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
SLITRK4-201ENST00000338017 CCER2I3L3R5 266 aa22.59■■□□□ 1.21
SLITRK4-201ENST00000338017 B4GALNT3Q6L9W6 998 aa22.58■■□□□ 1.21
SLITRK4-201ENST00000338017 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.21
SLITRK4-201ENST00000338017 MSH5O43196 834 aa22.57■■□□□ 1.2
SLITRK4-201ENST00000338017 IGF1RP08069 1367 aa22.57■■□□□ 1.2
SLITRK4-201ENST00000338017 FOXD1Q16676 465 aa22.55■■□□□ 1.2
SLITRK4-201ENST00000338017 ZNF326Q5BKZ1 582 aaKnown RBP22.54■■□□□ 1.2
SLITRK4-201ENST00000338017 MTUS2Q5JR59 1369 aa22.54■■□□□ 1.2
SLITRK4-201ENST00000338017 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
SLITRK4-201ENST00000338017 NBR1Q14596 966 aa22.52■■□□□ 1.2
SLITRK4-201ENST00000338017 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
SLITRK4-201ENST00000338017 MRS2Q9HD23 443 aa22.51■■□□□ 1.19
SLITRK4-201ENST00000338017 HSPA5P11021 654 aaKnown RBP22.49■■□□□ 1.19
SLITRK4-201ENST00000338017 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
SLITRK4-201ENST00000338017 TIAM1Q13009 1591 aa22.44■■□□□ 1.18
SLITRK4-201ENST00000338017 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
SLITRK4-201ENST00000338017 TIMELESSQ9UNS1 1208 aa22.41■■□□□ 1.18
SLITRK4-201ENST00000338017 EIF4G2P78344 907 aaKnown RBP eCLIP22.4■■□□□ 1.18
SLITRK4-201ENST00000338017 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.18
SLITRK4-201ENST00000338017 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
SLITRK4-201ENST00000338017 WASHC2AQ641Q2 1341 aa22.35■■□□□ 1.17
SLITRK4-201ENST00000338017 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.17
SLITRK4-201ENST00000338017 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.17
SLITRK4-201ENST00000338017 FGD5Q6ZNL6 1462 aa22.32■■□□□ 1.16
SLITRK4-201ENST00000338017 NPM2Q86SE8 214 aaKnown RBP22.3■■□□□ 1.16
SLITRK4-201ENST00000338017 L3MBTL2Q969R5 705 aa22.29■■□□□ 1.16
SLITRK4-201ENST00000338017 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
SLITRK4-201ENST00000338017 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
SLITRK4-201ENST00000338017 CFTRP13569 1480 aa22.26■■□□□ 1.15
SLITRK4-201ENST00000338017 C11orf95C9JLR9 678 aaPredicted RBP22.25■■□□□ 1.15
SLITRK4-201ENST00000338017 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
SLITRK4-201ENST00000338017 CCDC136Q96JN2 1154 aa22.24■■□□□ 1.15
SLITRK4-201ENST00000338017 DEKP35659 375 aaKnown RBP22.23■■□□□ 1.15
SLITRK4-201ENST00000338017 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
SLITRK4-201ENST00000338017 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
SLITRK4-201ENST00000338017 TDRD9Q8NDG6 1382 aaKnown RBP22.21■■□□□ 1.15
SLITRK4-201ENST00000338017 PRKRIP1Q9H875 184 aaPredicted RBP22.2■■□□□ 1.14
SLITRK4-201ENST00000338017 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
SLITRK4-201ENST00000338017 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
SLITRK4-201ENST00000338017 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
SLITRK4-201ENST00000338017 MPHOSPH9Q99550 1183 aa22.18■■□□□ 1.14
SLITRK4-201ENST00000338017 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.14
SLITRK4-201ENST00000338017 SLC4A1APQ9BWU0 796 aaKnown RBP22.17■■□□□ 1.14
SLITRK4-201ENST00000338017 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
SLITRK4-201ENST00000338017 RTL5Q5HYW3 569 aaPredicted RBP22.15■■□□□ 1.14
SLITRK4-201ENST00000338017 PAK3O75914 559 aaPredicted RBP22.14■■□□□ 1.14
SLITRK4-201ENST00000338017 NOP58Q9Y2X3 529 aaKnown RBP22.13■■□□□ 1.13
SLITRK4-201ENST00000338017 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
SLITRK4-201ENST00000338017 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
SLITRK4-201ENST00000338017 KDM2AQ9Y2K7 1162 aa22.1■■□□□ 1.13
SLITRK4-201ENST00000338017 NBPF8Q3BBV2 869 aa22.09■■□□□ 1.13
SLITRK4-201ENST00000338017 NAIPQ13075 1403 aa22.09■■□□□ 1.13
SLITRK4-201ENST00000338017 TMC1Q8TDI8 760 aa22.08■■□□□ 1.12
SLITRK4-201ENST00000338017 CASKIN1Q8WXD9 1431 aa22.08■■□□□ 1.12
SLITRK4-201ENST00000338017 HFM1A2PYH4 1435 aa22.05■■□□□ 1.12
SLITRK4-201ENST00000338017 NCOA2Q15596 1464 aa22.05■■□□□ 1.12
SLITRK4-201ENST00000338017 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
SLITRK4-201ENST00000338017 MAP3K1Q13233 1512 aa22.04■■□□□ 1.12
SLITRK4-201ENST00000338017 RTN4Q9NQC3 1192 aaKnown RBP22.04■■□□□ 1.12
SLITRK4-201ENST00000338017 ZBTB47Q9UFB7 747 aaPredicted RBP22.04■■□□□ 1.12
SLITRK4-201ENST00000338017 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
SLITRK4-201ENST00000338017 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
SLITRK4-201ENST00000338017 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
SLITRK4-201ENST00000338017 KIF7Q2M1P5 1343 aa22.02■■□□□ 1.12
SLITRK4-201ENST00000338017 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
SLITRK4-201ENST00000338017 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
SLITRK4-201ENST00000338017 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
SLITRK4-201ENST00000338017 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
SLITRK4-201ENST00000338017 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
SLITRK4-201ENST00000338017 ZBED9Q6R2W3 1325 aa22■■□□□ 1.11
SLITRK4-201ENST00000338017 NESP48681 1621 aa21.96■■□□□ 1.11
SLITRK4-201ENST00000338017 PTPN23Q9H3S7 1636 aa21.96■■□□□ 1.11
SLITRK4-201ENST00000338017 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
SLITRK4-201ENST00000338017 NUDCQ9Y266 331 aa21.91■■□□□ 1.1
SLITRK4-201ENST00000338017 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
SLITRK4-201ENST00000338017 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
SLITRK4-201ENST00000338017 FBLN2P98095 1184 aa21.88■■□□□ 1.09
SLITRK4-201ENST00000338017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.09
SLITRK4-201ENST00000338017 CARD11Q9BXL7 1154 aa21.86■■□□□ 1.09
SLITRK4-201ENST00000338017 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms