RNA–Protein interactions for RNA: ENST00000338017.8

SLITRK4-201, Transcript of SLIT and NTRK like family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK4, Length 3,357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK4-201ENST00000338017 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
SLITRK4-201ENST00000338017 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
SLITRK4-201ENST00000338017 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
SLITRK4-201ENST00000338017 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
SLITRK4-201ENST00000338017 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.94
SLITRK4-201ENST00000338017 HRCP23327 699 aa26.97■■□□□ 1.91
SLITRK4-201ENST00000338017 PPARGC1BQ86YN6 1023 aaKnown RBP26.95■■□□□ 1.9
SLITRK4-201ENST00000338017 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.89
SLITRK4-201ENST00000338017 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
SLITRK4-201ENST00000338017 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.85
SLITRK4-201ENST00000338017 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
SLITRK4-201ENST00000338017 FAM9AQ8IZU1 332 aaPredicted RBP26.23■■□□□ 1.79
SLITRK4-201ENST00000338017 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
SLITRK4-201ENST00000338017 TRIM26Q12899 539 aaPredicted RBP25.99■■□□□ 1.75
SLITRK4-201ENST00000338017 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
SLITRK4-201ENST00000338017 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.71
SLITRK4-201ENST00000338017 TTBK1Q5TCY1 1321 aaPredicted RBP25.69■■□□□ 1.7
SLITRK4-201ENST00000338017 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
SLITRK4-201ENST00000338017 ZEB1P37275 1124 aaPredicted RBP25.51■■□□□ 1.67
SLITRK4-201ENST00000338017 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
SLITRK4-201ENST00000338017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.38■■□□□ 1.65
SLITRK4-201ENST00000338017 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
SLITRK4-201ENST00000338017 PELP1Q8IZL8 1130 aaKnown RBP25.14■■□□□ 1.61
SLITRK4-201ENST00000338017 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
SLITRK4-201ENST00000338017 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
SLITRK4-201ENST00000338017 YTHDC1Q96MU7 727 aaKnown RBP25.01■■□□□ 1.59
SLITRK4-201ENST00000338017 NEUROD1Q13562 356 aa24.98■■□□□ 1.59
SLITRK4-201ENST00000338017 GTF3C3Q9Y5Q9 886 aa24.92■■□□□ 1.58
SLITRK4-201ENST00000338017 DIEXFQ68CQ4 756 aaKnown RBP24.91■■□□□ 1.58
SLITRK4-201ENST00000338017 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
SLITRK4-201ENST00000338017 ACIN1Q9UKV3 1341 aaKnown RBP24.88■■□□□ 1.57
SLITRK4-201ENST00000338017 CENPBP07199 599 aaPredicted RBP24.84■■□□□ 1.57
SLITRK4-201ENST00000338017 ABCC9O60706 1549 aa24.79■■□□□ 1.56
SLITRK4-201ENST00000338017 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
SLITRK4-201ENST00000338017 UBTFP17480 764 aaKnown RBP24.75■■□□□ 1.55
SLITRK4-201ENST00000338017 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
SLITRK4-201ENST00000338017 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.53
SLITRK4-201ENST00000338017 MROH2BQ7Z745 1585 aa24.43■■□□□ 1.5
SLITRK4-201ENST00000338017 ZNF316A6NFI3 1004 aaPredicted RBP24.39■■□□□ 1.5
SLITRK4-201ENST00000338017 MIER1Q8N108 512 aa24.32■■□□□ 1.48
SLITRK4-201ENST00000338017 APLP2Q06481 763 aa24.31■■□□□ 1.48
SLITRK4-201ENST00000338017 WIZO95785 1651 aa24.3■■□□□ 1.48
SLITRK4-201ENST00000338017 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
SLITRK4-201ENST00000338017 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
SLITRK4-201ENST00000338017 CSRNP3Q8WYN3 585 aa24.23■■□□□ 1.47
SLITRK4-201ENST00000338017 SOGA1O94964 1423 aa24.21■■□□□ 1.47
SLITRK4-201ENST00000338017 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
SLITRK4-201ENST00000338017 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
SLITRK4-201ENST00000338017 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
SLITRK4-201ENST00000338017 ITGAEP38570 1179 aa24.05■■□□□ 1.44
SLITRK4-201ENST00000338017 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
SLITRK4-201ENST00000338017 MYT1Q01538 1121 aa23.89■■□□□ 1.42
SLITRK4-201ENST00000338017 NACADO15069 1562 aa23.83■■□□□ 1.41
SLITRK4-201ENST00000338017 BCANQ96GW7 911 aa23.83■■□□□ 1.41
SLITRK4-201ENST00000338017 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
SLITRK4-201ENST00000338017 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
SLITRK4-201ENST00000338017 CLIP1P30622 1438 aa23.76■■□□□ 1.39
SLITRK4-201ENST00000338017 GOLGA3Q08378 1498 aa23.75■■□□□ 1.39
SLITRK4-201ENST00000338017 ATP1B4Q9UN42 357 aaPredicted RBP23.65■■□□□ 1.38
SLITRK4-201ENST00000338017 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
SLITRK4-201ENST00000338017 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
SLITRK4-201ENST00000338017 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
SLITRK4-201ENST00000338017 EEA1Q15075 1411 aa23.58■■□□□ 1.37
SLITRK4-201ENST00000338017 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
SLITRK4-201ENST00000338017 KANK4Q5T7N3 995 aaPredicted RBP23.54■■□□□ 1.36
SLITRK4-201ENST00000338017 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
SLITRK4-201ENST00000338017 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
SLITRK4-201ENST00000338017 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
SLITRK4-201ENST00000338017 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
SLITRK4-201ENST00000338017 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
SLITRK4-201ENST00000338017 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
SLITRK4-201ENST00000338017 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
SLITRK4-201ENST00000338017 FKBP8Q14318 412 aa23.41■■□□□ 1.34
SLITRK4-201ENST00000338017 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
SLITRK4-201ENST00000338017 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
SLITRK4-201ENST00000338017 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
SLITRK4-201ENST00000338017 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
SLITRK4-201ENST00000338017 TSHZ2Q9NRE2 1034 aa23.35■■□□□ 1.33
SLITRK4-201ENST00000338017 NEFLP07196 543 aa23.32■■□□□ 1.32
SLITRK4-201ENST00000338017 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
SLITRK4-201ENST00000338017 SYNJ1O43426 1573 aa23.29■■□□□ 1.32
SLITRK4-201ENST00000338017 KIF21BO75037 1637 aa23.19■■□□□ 1.3
SLITRK4-201ENST00000338017 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
SLITRK4-201ENST00000338017 ANP32EQ9BTT0 268 aa23.15■■□□□ 1.3
SLITRK4-201ENST00000338017 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
SLITRK4-201ENST00000338017 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
SLITRK4-201ENST00000338017 CLSPNQ9HAW4 1339 aa23.11■■□□□ 1.29
SLITRK4-201ENST00000338017 CCNB3Q8WWL7 1395 aa23.1■■□□□ 1.29
SLITRK4-201ENST00000338017 ANP32CO43423 234 aa23.06■■□□□ 1.28
SLITRK4-201ENST00000338017 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
SLITRK4-201ENST00000338017 ARAP1Q96P48 1450 aa23■■□□□ 1.27
SLITRK4-201ENST00000338017 ERICH6Q7L0X2 663 aa22.98■■□□□ 1.27
SLITRK4-201ENST00000338017 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
SLITRK4-201ENST00000338017 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
SLITRK4-201ENST00000338017 RBM19Q9Y4C8 960 aaKnown RBP22.93■■□□□ 1.26
SLITRK4-201ENST00000338017 HNRNPUQ00839 825 aaKnown RBP eCLIP22.92■■□□□ 1.26
SLITRK4-201ENST00000338017 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
SLITRK4-201ENST00000338017 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
SLITRK4-201ENST00000338017 SENP3-EIF4A1A0A087X0R7 540 aa22.84■■□□□ 1.25
SLITRK4-201ENST00000338017 TONSLQ96HA7 1378 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms