RNA–Protein interactions for RNA: ENST00000331238.6

RTN4RL1-201, Transcript of reticulon 4 receptor like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4RL1, Length 3,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1-201ENST00000331238 CCNB3Q8WWL7 1395 aa22.46■■□□□ 1.19
RTN4RL1-201ENST00000331238 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
RTN4RL1-201ENST00000331238 CFTRP13569 1480 aa22.4■■□□□ 1.18
RTN4RL1-201ENST00000331238 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
RTN4RL1-201ENST00000331238 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
RTN4RL1-201ENST00000331238 KIF21BO75037 1637 aa22.37■■□□□ 1.17
RTN4RL1-201ENST00000331238 HMGXB3Q12766 1538 aa22.37■■□□□ 1.17
RTN4RL1-201ENST00000331238 POLR3GLQ9BT43 218 aa22.36■■□□□ 1.17
RTN4RL1-201ENST00000331238 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
RTN4RL1-201ENST00000331238 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
RTN4RL1-201ENST00000331238 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.17
RTN4RL1-201ENST00000331238 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
RTN4RL1-201ENST00000331238 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
RTN4RL1-201ENST00000331238 FGD5Q6ZNL6 1462 aa22.31■■□□□ 1.16
RTN4RL1-201ENST00000331238 TONSLQ96HA7 1378 aa22.28■■□□□ 1.16
RTN4RL1-201ENST00000331238 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
RTN4RL1-201ENST00000331238 CUX1P39880 1505 aa22.28■■□□□ 1.16
RTN4RL1-201ENST00000331238 CHIC2Q9UKJ5 165 aa22.22■■□□□ 1.15
RTN4RL1-201ENST00000331238 AQRO60306 1485 aaKnown RBP eCLIP22.21■■□□□ 1.15
RTN4RL1-201ENST00000331238 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
RTN4RL1-201ENST00000331238 ANP32EQ9BTT0 268 aa22.2■■□□□ 1.14
RTN4RL1-201ENST00000331238 IGF1RP08069 1367 aa22.16■■□□□ 1.14
RTN4RL1-201ENST00000331238 SETD5Q9C0A6 1442 aa22.16■■□□□ 1.14
RTN4RL1-201ENST00000331238 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
RTN4RL1-201ENST00000331238 RRP7BPQ9NSQ0 103 aa22.11■■□□□ 1.13
RTN4RL1-201ENST00000331238 FAM9BQ8IZU0 186 aa22.1■■□□□ 1.13
RTN4RL1-201ENST00000331238 ZNF777Q9ULD5 760 aaPredicted RBP22.08■■□□□ 1.13
RTN4RL1-201ENST00000331238 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.13
RTN4RL1-201ENST00000331238 ZNF326Q5BKZ1 582 aaKnown RBP22.08■■□□□ 1.12
RTN4RL1-201ENST00000331238 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
RTN4RL1-201ENST00000331238 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
RTN4RL1-201ENST00000331238 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
RTN4RL1-201ENST00000331238 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
RTN4RL1-201ENST00000331238 PRXQ9BXM0 1461 aa22.05■■□□□ 1.12
RTN4RL1-201ENST00000331238 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
RTN4RL1-201ENST00000331238 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
RTN4RL1-201ENST00000331238 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
RTN4RL1-201ENST00000331238 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
RTN4RL1-201ENST00000331238 ARHGAP35Q9NRY4 1499 aa22■■□□□ 1.11
RTN4RL1-201ENST00000331238 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
RTN4RL1-201ENST00000331238 URB2Q14146 1524 aaKnown RBP21.99■■□□□ 1.11
RTN4RL1-201ENST00000331238 FHOD3Q2V2M9 1422 aa21.97■■□□□ 1.11
RTN4RL1-201ENST00000331238 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
RTN4RL1-201ENST00000331238 MRS2Q9HD23 443 aa21.93■■□□□ 1.1
RTN4RL1-201ENST00000331238 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
RTN4RL1-201ENST00000331238 CCER2I3L3R5 266 aa21.92■■□□□ 1.1
RTN4RL1-201ENST00000331238 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
RTN4RL1-201ENST00000331238 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
RTN4RL1-201ENST00000331238 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
RTN4RL1-201ENST00000331238 TIMELESSQ9UNS1 1208 aa21.88■■□□□ 1.09
RTN4RL1-201ENST00000331238 FOXD1Q16676 465 aa21.88■■□□□ 1.09
RTN4RL1-201ENST00000331238 WDR97A6NE52 1622 aa21.83■■□□□ 1.09
RTN4RL1-201ENST00000331238 HSPA5P11021 654 aaKnown RBP21.83■■□□□ 1.09
RTN4RL1-201ENST00000331238 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
RTN4RL1-201ENST00000331238 LAMC3Q9Y6N6 1575 aa21.81■■□□□ 1.08
RTN4RL1-201ENST00000331238 LRRC9Q6ZRR7 1453 aa21.81■■□□□ 1.08
RTN4RL1-201ENST00000331238 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
RTN4RL1-201ENST00000331238 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
RTN4RL1-201ENST00000331238 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
RTN4RL1-201ENST00000331238 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
RTN4RL1-201ENST00000331238 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
RTN4RL1-201ENST00000331238 KIF21AQ7Z4S6 1674 aa21.74■■□□□ 1.07
RTN4RL1-201ENST00000331238 NBR1Q14596 966 aa21.73■■□□□ 1.07
RTN4RL1-201ENST00000331238 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
RTN4RL1-201ENST00000331238 MAPKBP1O60336 1514 aa21.68■■□□□ 1.06
RTN4RL1-201ENST00000331238 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
RTN4RL1-201ENST00000331238 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
RTN4RL1-201ENST00000331238 PPP4R2Q9NY27 417 aa21.66■■□□□ 1.06
RTN4RL1-201ENST00000331238 CCDC136Q96JN2 1154 aa21.65■■□□□ 1.06
RTN4RL1-201ENST00000331238 CCDC18Q5T9S5 1454 aa21.65■■□□□ 1.06
RTN4RL1-201ENST00000331238 NPM2Q86SE8 214 aaKnown RBP21.65■■□□□ 1.06
RTN4RL1-201ENST00000331238 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
RTN4RL1-201ENST00000331238 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
RTN4RL1-201ENST00000331238 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
RTN4RL1-201ENST00000331238 RTL5Q5HYW3 569 aaPredicted RBP21.61■■□□□ 1.05
RTN4RL1-201ENST00000331238 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
RTN4RL1-201ENST00000331238 KDM2AQ9Y2K7 1162 aa21.61■■□□□ 1.05
RTN4RL1-201ENST00000331238 CCDC184Q52MB2 194 aa21.6■■□□□ 1.05
RTN4RL1-201ENST00000331238 FGD6Q6ZV73 1430 aa21.6■■□□□ 1.05
RTN4RL1-201ENST00000331238 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
RTN4RL1-201ENST00000331238 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
RTN4RL1-201ENST00000331238 WASHC2AQ641Q2 1341 aa21.58■■□□□ 1.05
RTN4RL1-201ENST00000331238 PLEKHD1A6NEE1 506 aa21.58■■□□□ 1.04
RTN4RL1-201ENST00000331238 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
RTN4RL1-201ENST00000331238 ANP32AP39687 249 aaKnown RBP21.55■■□□□ 1.04
RTN4RL1-201ENST00000331238 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
RTN4RL1-201ENST00000331238 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
RTN4RL1-201ENST00000331238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.03
RTN4RL1-201ENST00000331238 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
RTN4RL1-201ENST00000331238 CFDP1Q9UEE9 299 aaPredicted RBP21.51■■□□□ 1.03
RTN4RL1-201ENST00000331238 UACAQ9BZF9 1416 aa21.5■■□□□ 1.03
RTN4RL1-201ENST00000331238 MSH5O43196 834 aa21.49■■□□□ 1.03
RTN4RL1-201ENST00000331238 ZNF644Q9H582 1327 aaPredicted RBP21.47■■□□□ 1.03
RTN4RL1-201ENST00000331238 PCF11O94913 1555 aaKnown RBP21.47■■□□□ 1.03
RTN4RL1-201ENST00000331238 NPM1P06748 294 aaKnown RBP eCLIP21.47■■□□□ 1.03
RTN4RL1-201ENST00000331238 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
RTN4RL1-201ENST00000331238 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
RTN4RL1-201ENST00000331238 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
RTN4RL1-201ENST00000331238 C11orf95C9JLR9 678 aaPredicted RBP21.42■■□□□ 1.02
RTN4RL1-201ENST00000331238 ZBTB47Q9UFB7 747 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms