RNA–Protein interactions for RNA: ENST00000329410.3

C16orf54-201, Transcript of chromosome 16 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C16orf54, Length 2,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf54-201ENST00000329410 ATP1B4Q9UN42 357 aaPredicted RBP23.1■■□□□ 1.29
C16orf54-201ENST00000329410 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
C16orf54-201ENST00000329410 CCNB3Q8WWL7 1395 aa23.07■■□□□ 1.28
C16orf54-201ENST00000329410 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
C16orf54-201ENST00000329410 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
C16orf54-201ENST00000329410 FHOD3Q2V2M9 1422 aa23.04■■□□□ 1.28
C16orf54-201ENST00000329410 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
C16orf54-201ENST00000329410 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
C16orf54-201ENST00000329410 PCF11O94913 1555 aaKnown RBP22.98■■□□□ 1.27
C16orf54-201ENST00000329410 FHAD1B1AJZ9 1412 aa22.98■■□□□ 1.27
C16orf54-201ENST00000329410 CUL7Q14999 1698 aa22.98■■□□□ 1.27
C16orf54-201ENST00000329410 KIF21AQ7Z4S6 1674 aa22.98■■□□□ 1.27
C16orf54-201ENST00000329410 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
C16orf54-201ENST00000329410 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
C16orf54-201ENST00000329410 MAP3K1Q13233 1512 aa22.95■■□□□ 1.26
C16orf54-201ENST00000329410 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
C16orf54-201ENST00000329410 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
C16orf54-201ENST00000329410 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
C16orf54-201ENST00000329410 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
C16orf54-201ENST00000329410 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
C16orf54-201ENST00000329410 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
C16orf54-201ENST00000329410 EFCAB5A4FU69 1503 aa22.86■■□□□ 1.25
C16orf54-201ENST00000329410 CFAP43Q8NDM7 1665 aa22.86■■□□□ 1.25
C16orf54-201ENST00000329410 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
C16orf54-201ENST00000329410 FYCO1Q9BQS8 1478 aa22.83■■□□□ 1.24
C16orf54-201ENST00000329410 CASKIN1Q8WXD9 1431 aa22.82■■□□□ 1.24
C16orf54-201ENST00000329410 MIER1Q8N108 512 aa22.8■■□□□ 1.24
C16orf54-201ENST00000329410 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
C16orf54-201ENST00000329410 FMN1Q68DA7 1419 aa22.77■■□□□ 1.24
C16orf54-201ENST00000329410 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.23
C16orf54-201ENST00000329410 YTHDC1Q96MU7 727 aaKnown RBP22.74■■□□□ 1.23
C16orf54-201ENST00000329410 SNAPC4Q5SXM2 1469 aa22.74■■□□□ 1.23
C16orf54-201ENST00000329410 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
C16orf54-201ENST00000329410 SAMD9Q5K651 1589 aa22.71■■□□□ 1.23
C16orf54-201ENST00000329410 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
C16orf54-201ENST00000329410 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
C16orf54-201ENST00000329410 LRRIQ1Q96JM4 1722 aa22.67■■□□□ 1.22
C16orf54-201ENST00000329410 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
C16orf54-201ENST00000329410 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
C16orf54-201ENST00000329410 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
C16orf54-201ENST00000329410 FGD6Q6ZV73 1430 aa22.61■■□□□ 1.21
C16orf54-201ENST00000329410 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
C16orf54-201ENST00000329410 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
C16orf54-201ENST00000329410 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
C16orf54-201ENST00000329410 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
C16orf54-201ENST00000329410 NCOA2Q15596 1464 aa22.55■■□□□ 1.2
C16orf54-201ENST00000329410 IQGAP2Q13576 1575 aa22.53■■□□□ 1.2
C16orf54-201ENST00000329410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.53■■□□□ 1.2
C16orf54-201ENST00000329410 PTPRKQ15262 1439 aa22.52■■□□□ 1.2
C16orf54-201ENST00000329410 BCL11AQ9H165 835 aa22.51■■□□□ 1.19
C16orf54-201ENST00000329410 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
C16orf54-201ENST00000329410 MYOM3Q5VTT5 1437 aa22.49■■□□□ 1.19
C16orf54-201ENST00000329410 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
C16orf54-201ENST00000329410 SUPT6HQ7KZ85 1726 aaKnown RBP22.47■■□□□ 1.19
C16orf54-201ENST00000329410 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
C16orf54-201ENST00000329410 WDR62O43379 1518 aa22.46■■□□□ 1.19
C16orf54-201ENST00000329410 EHBP1L1Q8N3D4 1523 aa22.46■■□□□ 1.19
C16orf54-201ENST00000329410 CDK13Q14004 1512 aaKnown RBP22.43■■□□□ 1.18
C16orf54-201ENST00000329410 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
C16orf54-201ENST00000329410 CCDC18Q5T9S5 1454 aa22.42■■□□□ 1.18
C16orf54-201ENST00000329410 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
C16orf54-201ENST00000329410 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
C16orf54-201ENST00000329410 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
C16orf54-201ENST00000329410 HECW1Q76N89 1606 aa22.41■■□□□ 1.18
C16orf54-201ENST00000329410 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
C16orf54-201ENST00000329410 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
C16orf54-201ENST00000329410 RRP7BPQ9NSQ0 103 aa22.38■■□□□ 1.17
C16orf54-201ENST00000329410 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
C16orf54-201ENST00000329410 NAIPQ13075 1403 aa22.36■■□□□ 1.17
C16orf54-201ENST00000329410 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
C16orf54-201ENST00000329410 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
C16orf54-201ENST00000329410 FBLN2P98095 1184 aa22.34■■□□□ 1.17
C16orf54-201ENST00000329410 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.17
C16orf54-201ENST00000329410 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
C16orf54-201ENST00000329410 DISP1Q96F81 1524 aa22.32■■□□□ 1.16
C16orf54-201ENST00000329410 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
C16orf54-201ENST00000329410 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
C16orf54-201ENST00000329410 PPP1R15AO75807 674 aaPredicted RBP22.31■■□□□ 1.16
C16orf54-201ENST00000329410 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
C16orf54-201ENST00000329410 KIAA0556O60303 1618 aa22.29■■□□□ 1.16
C16orf54-201ENST00000329410 TIMELESSQ9UNS1 1208 aa22.27■■□□□ 1.16
C16orf54-201ENST00000329410 DDX10Q13206 875 aaKnown RBP22.26■■□□□ 1.15
C16orf54-201ENST00000329410 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
C16orf54-201ENST00000329410 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
C16orf54-201ENST00000329410 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
C16orf54-201ENST00000329410 NUP153P49790 1475 aaKnown RBP22.23■■□□□ 1.15
C16orf54-201ENST00000329410 KCNH8Q96L42 1107 aa22.22■■□□□ 1.15
C16orf54-201ENST00000329410 ZNF644Q9H582 1327 aaPredicted RBP22.2■■□□□ 1.14
C16orf54-201ENST00000329410 KDM6BO15054 1643 aa22.2■■□□□ 1.14
C16orf54-201ENST00000329410 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
C16orf54-201ENST00000329410 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
C16orf54-201ENST00000329410 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
C16orf54-201ENST00000329410 RAPGEF6Q8TEU7 1601 aa22.18■■□□□ 1.14
C16orf54-201ENST00000329410 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
C16orf54-201ENST00000329410 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
C16orf54-201ENST00000329410 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.13
C16orf54-201ENST00000329410 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
C16orf54-201ENST00000329410 JPH4Q96JJ6 628 aa22.13■■□□□ 1.13
C16orf54-201ENST00000329410 FOXD1Q16676 465 aa22.13■■□□□ 1.13
C16orf54-201ENST00000329410 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms