RNA–Protein interactions for RNA: ENST00000329410.3

C16orf54-201, Transcript of chromosome 16 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C16orf54, Length 2,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf54-201ENST00000329410 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
C16orf54-201ENST00000329410 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
C16orf54-201ENST00000329410 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
C16orf54-201ENST00000329410 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
C16orf54-201ENST00000329410 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
C16orf54-201ENST00000329410 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
C16orf54-201ENST00000329410 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
C16orf54-201ENST00000329410 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
C16orf54-201ENST00000329410 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
C16orf54-201ENST00000329410 ABCC9O60706 1549 aa26.37■■□□□ 1.81
C16orf54-201ENST00000329410 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
C16orf54-201ENST00000329410 NACADO15069 1562 aa26.03■■□□□ 1.76
C16orf54-201ENST00000329410 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
C16orf54-201ENST00000329410 CECR2Q9BXF3 1484 aa25.77■■□□□ 1.72
C16orf54-201ENST00000329410 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
C16orf54-201ENST00000329410 LOC105371045A0A1W2PR82 267 aa25.67■■□□□ 1.7
C16orf54-201ENST00000329410 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
C16orf54-201ENST00000329410 WIZO95785 1651 aa25.49■■□□□ 1.67
C16orf54-201ENST00000329410 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
C16orf54-201ENST00000329410 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
C16orf54-201ENST00000329410 PCGF6Q9BYE7 350 aa25.35■■□□□ 1.65
C16orf54-201ENST00000329410 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
C16orf54-201ENST00000329410 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
C16orf54-201ENST00000329410 HRCP23327 699 aa25.29■■□□□ 1.64
C16orf54-201ENST00000329410 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
C16orf54-201ENST00000329410 EHMT2Q96KQ7 1210 aa25.16■■□□□ 1.62
C16orf54-201ENST00000329410 SMARCA4P51532 1647 aa25.14■■□□□ 1.62
C16orf54-201ENST00000329410 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
C16orf54-201ENST00000329410 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
C16orf54-201ENST00000329410 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
C16orf54-201ENST00000329410 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
C16orf54-201ENST00000329410 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.58
C16orf54-201ENST00000329410 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
C16orf54-201ENST00000329410 TRIM26Q12899 539 aaPredicted RBP24.85■■□□□ 1.57
C16orf54-201ENST00000329410 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
C16orf54-201ENST00000329410 PPARGC1BQ86YN6 1023 aaKnown RBP24.71■■□□□ 1.55
C16orf54-201ENST00000329410 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
C16orf54-201ENST00000329410 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
C16orf54-201ENST00000329410 SOGA1O94964 1423 aa24.55■■□□□ 1.52
C16orf54-201ENST00000329410 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
C16orf54-201ENST00000329410 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
C16orf54-201ENST00000329410 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
C16orf54-201ENST00000329410 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
C16orf54-201ENST00000329410 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
C16orf54-201ENST00000329410 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
C16orf54-201ENST00000329410 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
C16orf54-201ENST00000329410 EEA1Q15075 1411 aa24.27■■□□□ 1.48
C16orf54-201ENST00000329410 MYT1Q01538 1121 aa24.26■■□□□ 1.47
C16orf54-201ENST00000329410 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
C16orf54-201ENST00000329410 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
C16orf54-201ENST00000329410 GOLGA3Q08378 1498 aa24.14■■□□□ 1.46
C16orf54-201ENST00000329410 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
C16orf54-201ENST00000329410 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
C16orf54-201ENST00000329410 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
C16orf54-201ENST00000329410 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
C16orf54-201ENST00000329410 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
C16orf54-201ENST00000329410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
C16orf54-201ENST00000329410 TOP2BQ02880 1626 aa24■■□□□ 1.43
C16orf54-201ENST00000329410 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
C16orf54-201ENST00000329410 KIF21BO75037 1637 aa23.97■■□□□ 1.43
C16orf54-201ENST00000329410 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
C16orf54-201ENST00000329410 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
C16orf54-201ENST00000329410 CLIP1P30622 1438 aa23.89■■□□□ 1.41
C16orf54-201ENST00000329410 CCER1Q8TC90 406 aaPredicted RBP23.89■■□□□ 1.41
C16orf54-201ENST00000329410 CUX1P39880 1505 aa23.87■■□□□ 1.41
C16orf54-201ENST00000329410 CFTRP13569 1480 aa23.86■■□□□ 1.41
C16orf54-201ENST00000329410 VPS8Q8N3P4 1428 aa23.72■■□□□ 1.39
C16orf54-201ENST00000329410 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
C16orf54-201ENST00000329410 PRXQ9BXM0 1461 aa23.7■■□□□ 1.38
C16orf54-201ENST00000329410 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
C16orf54-201ENST00000329410 CADPSQ9ULU8 1353 aa23.66■■□□□ 1.38
C16orf54-201ENST00000329410 APLP2Q06481 763 aa23.65■■□□□ 1.38
C16orf54-201ENST00000329410 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
C16orf54-201ENST00000329410 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
C16orf54-201ENST00000329410 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
C16orf54-201ENST00000329410 CUX2O14529 1486 aa23.54■■□□□ 1.36
C16orf54-201ENST00000329410 ARAP1Q96P48 1450 aa23.53■■□□□ 1.36
C16orf54-201ENST00000329410 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
C16orf54-201ENST00000329410 IGF1RP08069 1367 aa23.46■■□□□ 1.35
C16orf54-201ENST00000329410 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
C16orf54-201ENST00000329410 KANK4Q5T7N3 995 aaPredicted RBP23.44■■□□□ 1.34
C16orf54-201ENST00000329410 ACIN1Q9UKV3 1341 aaKnown RBP23.43■■□□□ 1.34
C16orf54-201ENST00000329410 NESP48681 1621 aa23.43■■□□□ 1.34
C16orf54-201ENST00000329410 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
C16orf54-201ENST00000329410 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
C16orf54-201ENST00000329410 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
C16orf54-201ENST00000329410 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
C16orf54-201ENST00000329410 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
C16orf54-201ENST00000329410 TOPBP1Q92547 1522 aa23.26■■□□□ 1.31
C16orf54-201ENST00000329410 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
C16orf54-201ENST00000329410 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
C16orf54-201ENST00000329410 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
C16orf54-201ENST00000329410 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
C16orf54-201ENST00000329410 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
C16orf54-201ENST00000329410 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
C16orf54-201ENST00000329410 ITGAEP38570 1179 aa23.13■■□□□ 1.29
C16orf54-201ENST00000329410 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
C16orf54-201ENST00000329410 ZNF316A6NFI3 1004 aaPredicted RBP23.12■■□□□ 1.29
C16orf54-201ENST00000329410 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
C16orf54-201ENST00000329410 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 317.8 ms