RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 IQGAP2Q13576 1575 aa8.37□□□□□ -1.07
LRIT3-201ENST00000327908 RUSC2Q8N2Y8 1516 aa8.35□□□□□ -1.07
LRIT3-201ENST00000327908 UGGT2Q9NYU1 1516 aa8.35□□□□□ -1.07
LRIT3-201ENST00000327908 TNIKQ9UKE5 1360 aa8.35□□□□□ -1.07
LRIT3-201ENST00000327908 SHROOM2Q13796 1616 aa8.34□□□□□ -1.07
LRIT3-201ENST00000327908 CEP170Q5SW79 1584 aa8.32□□□□□ -1.08
LRIT3-201ENST00000327908 FBLN2P98095 1184 aa8.32□□□□□ -1.08
LRIT3-201ENST00000327908 UBTFP17480 764 aaKnown RBP8.28□□□□□ -1.08
LRIT3-201ENST00000327908 SAMD9Q5K651 1589 aa8.27□□□□□ -1.09
LRIT3-201ENST00000327908 FMN1Q68DA7 1419 aa8.27□□□□□ -1.09
LRIT3-201ENST00000327908 JPH4Q96JJ6 628 aa8.26□□□□□ -1.09
LRIT3-201ENST00000327908 KIAA0556O60303 1618 aa8.26□□□□□ -1.09
LRIT3-201ENST00000327908 PRG4Q92954 1404 aaPredicted RBP8.24□□□□□ -1.09
LRIT3-201ENST00000327908 UHRF1BP1LA0JNW5 1464 aa8.24□□□□□ -1.09
LRIT3-201ENST00000327908 CLIP1P30622 1438 aa8.23□□□□□ -1.09
LRIT3-201ENST00000327908 ARHGEF11O15085 1522 aa8.21□□□□□ -1.09
LRIT3-201ENST00000327908 PTPRGP23470 1445 aa8.21□□□□□ -1.1
LRIT3-201ENST00000327908 CCDC18Q5T9S5 1454 aa8.2□□□□□ -1.1
LRIT3-201ENST00000327908 HECW1Q76N89 1606 aa8.2□□□□□ -1.1
LRIT3-201ENST00000327908 CEP162Q5TB80 1403 aa8.2□□□□□ -1.1
LRIT3-201ENST00000327908 DISP1Q96F81 1524 aa8.2□□□□□ -1.1
LRIT3-201ENST00000327908 DNAJC5Q9H3Z4 198 aa8.19□□□□□ -1.1
LRIT3-201ENST00000327908 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
LRIT3-201ENST00000327908 RIMBP3CA6NJZ7 1639 aa8.19□□□□□ -1.1
LRIT3-201ENST00000327908 RIMBP3BA6NNM3 1639 aa8.19□□□□□ -1.1
LRIT3-201ENST00000327908 RIMBP3Q9UFD9 1639 aa8.19□□□□□ -1.1
LRIT3-201ENST00000327908 MAP3K1Q13233 1512 aa8.18□□□□□ -1.1
LRIT3-201ENST00000327908 ABCC2Q92887 1545 aa8.18□□□□□ -1.1
LRIT3-201ENST00000327908 UACAQ9BZF9 1416 aa8.18□□□□□ -1.1
LRIT3-201ENST00000327908 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
LRIT3-201ENST00000327908 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
LRIT3-201ENST00000327908 ARHGAP35Q9NRY4 1499 aa8.17□□□□□ -1.1
LRIT3-201ENST00000327908 CASKIN1Q8WXD9 1431 aa8.17□□□□□ -1.1
LRIT3-201ENST00000327908 RAPGEF6Q8TEU7 1601 aa8.16□□□□□ -1.1
LRIT3-201ENST00000327908 ABCA8O94911 1581 aa8.16□□□□□ -1.1
LRIT3-201ENST00000327908 VPS8Q8N3P4 1428 aa8.16□□□□□ -1.1
LRIT3-201ENST00000327908 APLP2Q06481 763 aa8.14□□□□□ -1.11
LRIT3-201ENST00000327908 PLB1Q6P1J6 1458 aa8.14□□□□□ -1.11
LRIT3-201ENST00000327908 ARAP1Q96P48 1450 aa8.13□□□□□ -1.11
LRIT3-201ENST00000327908 KDM5BQ9UGL1 1544 aa8.12□□□□□ -1.11
LRIT3-201ENST00000327908 MAPKBP1O60336 1514 aa8.12□□□□□ -1.11
LRIT3-201ENST00000327908 FHOD3Q2V2M9 1422 aa8.11□□□□□ -1.11
LRIT3-201ENST00000327908 CFAP43Q8NDM7 1665 aa8.09□□□□□ -1.11
LRIT3-201ENST00000327908 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.11
LRIT3-201ENST00000327908 PHLDB1Q86UU1 1377 aa8.08□□□□□ -1.12
LRIT3-201ENST00000327908 PCF11O94913 1555 aaKnown RBP8.08□□□□□ -1.12
LRIT3-201ENST00000327908 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
LRIT3-201ENST00000327908 GLI2P10070 1586 aa8.07□□□□□ -1.12
LRIT3-201ENST00000327908 EPRSP07814 1512 aaKnown RBP8.07□□□□□ -1.12
LRIT3-201ENST00000327908 ERCC6L2Q5T890 1561 aa8.07□□□□□ -1.12
LRIT3-201ENST00000327908 CFAP74Q9C0B2 1584 aa8.07□□□□□ -1.12
LRIT3-201ENST00000327908 PLEKHD1A6NEE1 506 aa8.06□□□□□ -1.12
LRIT3-201ENST00000327908 ARAP3Q8WWN8 1544 aa8.06□□□□□ -1.12
LRIT3-201ENST00000327908 ZCCHC11Q5TAX3 1644 aaKnown RBP8.06□□□□□ -1.12
LRIT3-201ENST00000327908 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
LRIT3-201ENST00000327908 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
LRIT3-201ENST00000327908 WDR7Q9Y4E6 1490 aa8.05□□□□□ -1.12
LRIT3-201ENST00000327908 KIF14Q15058 1648 aa8.05□□□□□ -1.12
LRIT3-201ENST00000327908 TIAM1Q13009 1591 aa8.05□□□□□ -1.12
LRIT3-201ENST00000327908 ATP10BO94823 1461 aa8.04□□□□□ -1.12
LRIT3-201ENST00000327908 TEX14Q8IWB6 1497 aa8.04□□□□□ -1.12
LRIT3-201ENST00000327908 LOC105371045A0A1W2PR82 267 aa8.04□□□□□ -1.12
LRIT3-201ENST00000327908 MTUS2Q5JR59 1369 aa8.03□□□□□ -1.12
LRIT3-201ENST00000327908 PLEKHH2Q8IVE3 1493 aa8.03□□□□□ -1.12
LRIT3-201ENST00000327908 SUPT6HQ7KZ85 1726 aaKnown RBP8.03□□□□□ -1.12
LRIT3-201ENST00000327908 CYB5RLQ6IPT4 315 aa8.02□□□□□ -1.13
LRIT3-201ENST00000327908 ITSN2Q9NZM3 1697 aa8.02□□□□□ -1.13
LRIT3-201ENST00000327908 ACIN1Q9UKV3 1341 aaKnown RBP8.02□□□□□ -1.13
LRIT3-201ENST00000327908 P3H3Q8IVL6 736 aa8.01□□□□□ -1.13
LRIT3-201ENST00000327908 ASXL2Q76L83 1435 aa8.01□□□□□ -1.13
LRIT3-201ENST00000327908 ABCC10Q5T3U5 1492 aa8.01□□□□□ -1.13
LRIT3-201ENST00000327908 ABCA9Q8IUA7 1624 aa8□□□□□ -1.13
LRIT3-201ENST00000327908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.99□□□□□ -1.13
LRIT3-201ENST00000327908 HNRNPUL2Q1KMD3 747 aaKnown RBP7.99□□□□□ -1.13
LRIT3-201ENST00000327908 LRRC9Q6ZRR7 1453 aa7.99□□□□□ -1.13
LRIT3-201ENST00000327908 MAGI3Q5TCQ9 1506 aa7.99□□□□□ -1.13
LRIT3-201ENST00000327908 RANGAP1P46060 587 aaPredicted RBP7.99□□□□□ -1.13
LRIT3-201ENST00000327908 NEO1Q92859 1461 aa7.98□□□□□ -1.13
LRIT3-201ENST00000327908 MIA2Q96PC5 1412 aa7.98□□□□□ -1.13
LRIT3-201ENST00000327908 EHMT2Q96KQ7 1210 aa7.98□□□□□ -1.13
LRIT3-201ENST00000327908 ATP1B4Q9UN42 357 aaPredicted RBP7.98□□□□□ -1.13
LRIT3-201ENST00000327908 RSPH4AQ5TD94 716 aa7.97□□□□□ -1.13
LRIT3-201ENST00000327908 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
LRIT3-201ENST00000327908 MYO5CQ9NQX4 1742 aa7.97□□□□□ -1.13
LRIT3-201ENST00000327908 CCNB3Q8WWL7 1395 aa7.96□□□□□ -1.13
LRIT3-201ENST00000327908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.96□□□□□ -1.13
LRIT3-201ENST00000327908 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
LRIT3-201ENST00000327908 MAP3K4Q9Y6R4 1608 aa7.95□□□□□ -1.14
LRIT3-201ENST00000327908 PREX2Q70Z35 1606 aa7.94□□□□□ -1.14
LRIT3-201ENST00000327908 PLCH2O75038 1416 aa7.94□□□□□ -1.14
LRIT3-201ENST00000327908 EFCAB2Q5VUJ9 269 aa7.94□□□□□ -1.14
LRIT3-201ENST00000327908 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
LRIT3-201ENST00000327908 CD109Q6YHK3 1445 aa7.93□□□□□ -1.14
LRIT3-201ENST00000327908 KIAA1107Q9UPP5 1409 aa7.93□□□□□ -1.14
LRIT3-201ENST00000327908 MYOM3Q5VTT5 1437 aa7.93□□□□□ -1.14
LRIT3-201ENST00000327908 NCOA2Q15596 1464 aa7.93□□□□□ -1.14
LRIT3-201ENST00000327908 LRRIQ1Q96JM4 1722 aa7.92□□□□□ -1.14
LRIT3-201ENST00000327908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.92□□□□□ -1.14
LRIT3-201ENST00000327908 ARHGAP5Q13017 1502 aa7.91□□□□□ -1.14
LRIT3-201ENST00000327908 ARHGEF5Q12774 1597 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms