RNA–Protein interactions for RNA: ENST00000327283.7

PTPN2-202, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-202ENST00000327283 KIF21AQ7Z4S6 1674 aa34.69■■■■□ 3.14
PTPN2-202ENST00000327283 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.144e-6■■■■■ 31
PTPN2-202ENST00000327283 CCNB3Q8WWL7 1395 aa34.61■■■■□ 3.13
PTPN2-202ENST00000327283 FYCO1Q9BQS8 1478 aa34.61■■■■□ 3.13
PTPN2-202ENST00000327283 LRRC9Q6ZRR7 1453 aa34.59■■■■□ 3.13
PTPN2-202ENST00000327283 PCF11O94913 1555 aaKnown RBP34.58■■■■□ 3.13
PTPN2-202ENST00000327283 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
PTPN2-202ENST00000327283 TARBP1Q13395 1621 aaKnown RBP34.56■■■■□ 3.12
PTPN2-202ENST00000327283 CASKIN1Q8WXD9 1431 aa34.52■■■■□ 3.12
PTPN2-202ENST00000327283 SAMD9Q5K651 1589 aa34.49■■■■□ 3.11
PTPN2-202ENST00000327283 FMN1Q68DA7 1419 aa34.47■■■■□ 3.11
PTPN2-202ENST00000327283 DHX57Q6P158 1386 aaKnown RBP34.42■■■■□ 3.1
PTPN2-202ENST00000327283 ZNF316A6NFI3 1004 aaPredicted RBP34.41■■■■□ 3.1
PTPN2-202ENST00000327283 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
PTPN2-202ENST00000327283 FHOD3Q2V2M9 1422 aa34.4■■■■□ 3.1
PTPN2-202ENST00000327283 PBRM1Q86U86 1689 aa34.39■■■■□ 3.1
PTPN2-202ENST00000327283 THOC2Q8NI27 1593 aaKnown RBP34.39■■■■□ 3.1
PTPN2-202ENST00000327283 TDRD9Q8NDG6 1382 aaKnown RBP34.39■■■■□ 3.1
PTPN2-202ENST00000327283 DIEXFQ68CQ4 756 aaKnown RBP34.38■■■■□ 3.09
PTPN2-202ENST00000327283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.34■■■■□ 3.09
PTPN2-202ENST00000327283 SNAPC4Q5SXM2 1469 aa34.32■■■■□ 3.08
PTPN2-202ENST00000327283 DNAJC5BQ9UF47 199 aa34.29■■■■□ 3.08
PTPN2-202ENST00000327283 ADAMTS12P58397 1594 aa34.25■■■■□ 3.07
PTPN2-202ENST00000327283 PHLDB1Q86UU1 1377 aa34.25■■■■□ 3.07
PTPN2-202ENST00000327283 WDR62O43379 1518 aa34.22■■■■□ 3.07
PTPN2-202ENST00000327283 IFT140Q96RY7 1462 aa34.19■■■■□ 3.06
PTPN2-202ENST00000327283 GRIN2BQ13224 1484 aa34.18■■■■□ 3.06
PTPN2-202ENST00000327283 P3H3Q8IVL6 736 aa34.16■■■■□ 3.06
PTPN2-202ENST00000327283 SETD5Q9C0A6 1442 aa34.14■■■■□ 3.06
PTPN2-202ENST00000327283 IQGAP2Q13576 1575 aa34.12■■■■□ 3.05
PTPN2-202ENST00000327283 RAB3GAP2Q9H2M9 1393 aa34.1■■■■□ 3.05
PTPN2-202ENST00000327283 LRRIQ1Q96JM4 1722 aa34.09■■■■□ 3.05
PTPN2-202ENST00000327283 CCDC18Q5T9S5 1454 aa34.08■■■■□ 3.05
PTPN2-202ENST00000327283 EHBP1L1Q8N3D4 1523 aa34.07■■■■□ 3.05
PTPN2-202ENST00000327283 SUPT6HQ7KZ85 1726 aaKnown RBP34.03■■■■□ 3.04
PTPN2-202ENST00000327283 HECW1Q76N89 1606 aa34.01■■■■□ 3.04
PTPN2-202ENST00000327283 FGD6Q6ZV73 1430 aa34.01■■■■□ 3.04
PTPN2-202ENST00000327283 UGGT2Q9NYU1 1516 aa34.01■■■■□ 3.03
PTPN2-202ENST00000327283 MTUS2Q5JR59 1369 aa33.99■■■■□ 3.03
PTPN2-202ENST00000327283 ATP1B4Q9UN42 357 aaPredicted RBP33.97■■■■□ 3.03
PTPN2-202ENST00000327283 MAPKBP1O60336 1514 aa33.96■■■■□ 3.03
PTPN2-202ENST00000327283 ARHGEF11O15085 1522 aa33.93■■■■□ 3.02
PTPN2-202ENST00000327283 FAM50AQ14320 339 aaKnown RBP33.91■■■■□ 3.02
PTPN2-202ENST00000327283 ITGAEP38570 1179 aa33.9■■■■□ 3.02
PTPN2-202ENST00000327283 NCOA2Q15596 1464 aa33.89■■■■□ 3.02
PTPN2-202ENST00000327283 MYOM3Q5VTT5 1437 aa33.89■■■■□ 3.02
PTPN2-202ENST00000327283 CENPBP07199 599 aaPredicted RBP33.87■■■■□ 3.01
PTPN2-202ENST00000327283 KIAA0586Q9BVV6 1533 aa33.86■■■■□ 3.01
PTPN2-202ENST00000327283 EIF4G3O43432 1585 aaKnown RBP33.84■■■■□ 3.01
PTPN2-202ENST00000327283 ZNF608Q9ULD9 1512 aaPredicted RBP33.83■■■■□ 3.01
PTPN2-202ENST00000327283 TIMELESSQ9UNS1 1208 aa33.8■■■■□ 3
PTPN2-202ENST00000327283 MAGI1Q96QZ7 1491 aaPredicted RBP33.79■■■■□ 3
PTPN2-202ENST00000327283 ACIN1Q9UKV3 1341 aaKnown RBP33.79■■■■□ 3
PTPN2-202ENST00000327283 EPRSP07814 1512 aaKnown RBP33.77■■■■□ 3
PTPN2-202ENST00000327283 HFM1A2PYH4 1435 aa33.77■■■■□ 3
PTPN2-202ENST00000327283 TCOF1Q13428 1488 aaKnown RBP33.77■■■■□ 3
PTPN2-202ENST00000327283 GRIN2AQ12879 1464 aa33.76■■■□□ 2.99
PTPN2-202ENST00000327283 PTPN23Q9H3S7 1636 aa33.76■■■□□ 2.99
PTPN2-202ENST00000327283 KIAA0556O60303 1618 aa33.75■■■□□ 2.99
PTPN2-202ENST00000327283 ERCC6Q03468 1493 aa33.73■■■□□ 2.99
PTPN2-202ENST00000327283 MAGI3Q5TCQ9 1506 aa33.73■■■□□ 2.99
PTPN2-202ENST00000327283 MIA2Q96PC5 1412 aa33.67■■■□□ 2.98
PTPN2-202ENST00000327283 SCAF1Q9H7N4 1312 aaKnown RBP33.66■■■□□ 2.98
PTPN2-202ENST00000327283 AKNAQ7Z591 1439 aa33.66■■■□□ 2.98
PTPN2-202ENST00000327283 DISP1Q96F81 1524 aa33.66■■■□□ 2.98
PTPN2-202ENST00000327283 UACAQ9BZF9 1416 aa33.62■■■□□ 2.97
PTPN2-202ENST00000327283 SYNJ2O15056 1496 aa33.62■■■□□ 2.97
PTPN2-202ENST00000327283 GCC2Q8IWJ2 1684 aa33.61■■■□□ 2.97
PTPN2-202ENST00000327283 RAPGEF6Q8TEU7 1601 aa33.58■■■□□ 2.97
PTPN2-202ENST00000327283 PTPRKQ15262 1439 aa33.58■■■□□ 2.97
PTPN2-202ENST00000327283 MIER1Q8N108 512 aa33.58■■■□□ 2.97
PTPN2-202ENST00000327283 NAIPQ13075 1403 aa33.58■■■□□ 2.97
PTPN2-202ENST00000327283 NEUROD1Q13562 356 aa33.57■■■□□ 2.96
PTPN2-202ENST00000327283 CDK13Q14004 1512 aaKnown RBP33.54■■■□□ 2.96
PTPN2-202ENST00000327283 CEP170Q5SW79 1584 aa33.49■■■□□ 2.95
PTPN2-202ENST00000327283 NUP160Q12769 1436 aa33.48■■■□□ 2.95
PTPN2-202ENST00000327283 NUP153P49790 1475 aaKnown RBP33.47■■■□□ 2.95
PTPN2-202ENST00000327283 CDK11AQ9UQ88 783 aaPredicted RBP33.38■■■□□ 2.93
PTPN2-202ENST00000327283 CARMIL2Q6F5E8 1435 aa33.38■■■□□ 2.93
PTPN2-202ENST00000327283 ADCY10Q96PN6 1610 aa33.37■■■□□ 2.93
PTPN2-202ENST00000327283 CHMP7Q8WUX9 453 aaPredicted RBP33.35■■■□□ 2.93
PTPN2-202ENST00000327283 ROCK1Q13464 1354 aa33.34■■■□□ 2.93
PTPN2-202ENST00000327283 SIN3AQ96ST3 1273 aa33.34■■■□□ 2.93
PTPN2-202ENST00000327283 DNMT1P26358 1616 aaKnown RBP33.34■■■□□ 2.93
PTPN2-202ENST00000327283 ITSN2Q9NZM3 1697 aa33.34■■■□□ 2.93
PTPN2-202ENST00000327283 PPP1R15AO75807 674 aaPredicted RBP33.31■■■□□ 2.92
PTPN2-202ENST00000327283 TROQ12816 1431 aaPredicted RBP33.3■■■□□ 2.92
PTPN2-202ENST00000327283 TONSLQ96HA7 1378 aa33.25■■■□□ 2.91
PTPN2-202ENST00000327283 DAPK1P53355 1430 aa33.23■■■□□ 2.91
PTPN2-202ENST00000327283 ABCA8O94911 1581 aa33.2■■■□□ 2.9
PTPN2-202ENST00000327283 GTF3C3Q9Y5Q9 886 aa33.17■■■□□ 2.9
PTPN2-202ENST00000327283 JPH4Q96JJ6 628 aa33.16■■■□□ 2.9
PTPN2-202ENST00000327283 ABCC5O15440 1437 aa33.15■■■□□ 2.9
PTPN2-202ENST00000327283 ADGBQ8N7X0 1667 aa33.14■■■□□ 2.9
PTPN2-202ENST00000327283 PLB1Q6P1J6 1458 aa33.14■■■□□ 2.9
PTPN2-202ENST00000327283 KDM6BO15054 1643 aa33.11■■■□□ 2.89
PTPN2-202ENST00000327283 YTHDC1Q96MU7 727 aaKnown RBP33.11■■■□□ 2.89
PTPN2-202ENST00000327283 RRP7BPQ9NSQ0 103 aa33.1■■■□□ 2.89
PTPN2-202ENST00000327283 KDM5BQ9UGL1 1544 aa33.1■■■□□ 2.89
PTPN2-202ENST00000327283 DENND4BO75064 1496 aaPredicted RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms