RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 EFCAB5A4FU69 1503 aa23.57■■□□□ 1.36
SMARCD2-202ENST00000323347 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
SMARCD2-202ENST00000323347 ZNF316A6NFI3 1004 aaPredicted RBP23.54■■□□□ 1.36
SMARCD2-202ENST00000323347 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
SMARCD2-202ENST00000323347 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
SMARCD2-202ENST00000323347 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
SMARCD2-202ENST00000323347 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.353e-8■■■■□ 23.4
SMARCD2-202ENST00000323347 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
SMARCD2-202ENST00000323347 CFAP43Q8NDM7 1665 aa23.49■■□□□ 1.35
SMARCD2-202ENST00000323347 CTTNBP2Q8WZ74 1663 aa23.49■■□□□ 1.35
SMARCD2-202ENST00000323347 PCF11O94913 1555 aaKnown RBP23.45■■□□□ 1.34
SMARCD2-202ENST00000323347 FYCO1Q9BQS8 1478 aa23.45■■□□□ 1.34
SMARCD2-202ENST00000323347 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
SMARCD2-202ENST00000323347 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
SMARCD2-202ENST00000323347 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
SMARCD2-202ENST00000323347 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.33
SMARCD2-202ENST00000323347 FHOD3Q2V2M9 1422 aa23.38■■□□□ 1.33
SMARCD2-202ENST00000323347 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
SMARCD2-202ENST00000323347 SAMD9Q5K651 1589 aa23.36■■□□□ 1.33
SMARCD2-202ENST00000323347 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
SMARCD2-202ENST00000323347 PHLDB1Q86UU1 1377 aa23.34■■□□□ 1.33
SMARCD2-202ENST00000323347 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-202ENST00000323347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.33■■□□□ 1.32
SMARCD2-202ENST00000323347 SNAPC4Q5SXM2 1469 aa23.31■■□□□ 1.32
SMARCD2-202ENST00000323347 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
SMARCD2-202ENST00000323347 SETD5Q9C0A6 1442 aa23.24■■□□□ 1.31
SMARCD2-202ENST00000323347 RAB3GAP2Q9H2M9 1393 aa23.24■■□□□ 1.31
SMARCD2-202ENST00000323347 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
SMARCD2-202ENST00000323347 ACIN1Q9UKV3 1341 aaKnown RBP23.21■■□□□ 1.31
SMARCD2-202ENST00000323347 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
SMARCD2-202ENST00000323347 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
SMARCD2-202ENST00000323347 PBRM1Q86U86 1689 aa23.19■■□□□ 1.3
SMARCD2-202ENST00000323347 MAPKBP1O60336 1514 aa23.16■■□□□ 1.3
SMARCD2-202ENST00000323347 ADAMTS12P58397 1594 aa23.14■■□□□ 1.3
SMARCD2-202ENST00000323347 ITGAEP38570 1179 aa23.14■■□□□ 1.29
SMARCD2-202ENST00000323347 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
SMARCD2-202ENST00000323347 LRRIQ1Q96JM4 1722 aa23.12■■□□□ 1.29
SMARCD2-202ENST00000323347 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
SMARCD2-202ENST00000323347 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
SMARCD2-202ENST00000323347 WDR62O43379 1518 aa23.1■■□□□ 1.29
SMARCD2-202ENST00000323347 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
SMARCD2-202ENST00000323347 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
SMARCD2-202ENST00000323347 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
SMARCD2-202ENST00000323347 MTUS2Q5JR59 1369 aa23.07■■□□□ 1.28
SMARCD2-202ENST00000323347 IQGAP2Q13576 1575 aa23.07■■□□□ 1.28
SMARCD2-202ENST00000323347 EHBP1L1Q8N3D4 1523 aa23.06■■□□□ 1.28
SMARCD2-202ENST00000323347 CCDC18Q5T9S5 1454 aa23.06■■□□□ 1.28
SMARCD2-202ENST00000323347 MYT1Q01538 1121 aa23.05■■□□□ 1.28
SMARCD2-202ENST00000323347 ARHGEF11O15085 1522 aa23.05■■□□□ 1.28
SMARCD2-202ENST00000323347 MIER1Q8N108 512 aa23.04■■□□□ 1.28
SMARCD2-202ENST00000323347 NCOA2Q15596 1464 aa23.02■■□□□ 1.28
SMARCD2-202ENST00000323347 UGGT2Q9NYU1 1516 aa23.02■■□□□ 1.28
SMARCD2-202ENST00000323347 SUPT6HQ7KZ85 1726 aaKnown RBP23.01■■□□□ 1.27
SMARCD2-202ENST00000323347 MYOM3Q5VTT5 1437 aa23.01■■□□□ 1.27
SMARCD2-202ENST00000323347 TIMELESSQ9UNS1 1208 aa23.01■■□□□ 1.27
SMARCD2-202ENST00000323347 HECW1Q76N89 1606 aa22.99■■□□□ 1.27
SMARCD2-202ENST00000323347 HFM1A2PYH4 1435 aa22.96■■□□□ 1.27
SMARCD2-202ENST00000323347 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
SMARCD2-202ENST00000323347 ZNF608Q9ULD9 1512 aaPredicted RBP22.94■■□□□ 1.26
SMARCD2-202ENST00000323347 PTPRKQ15262 1439 aa22.93■■□□□ 1.26
SMARCD2-202ENST00000323347 KIAA0586Q9BVV6 1533 aa22.93■■□□□ 1.26
SMARCD2-202ENST00000323347 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
SMARCD2-202ENST00000323347 EPRSP07814 1512 aaKnown RBP22.91■■□□□ 1.26
SMARCD2-202ENST00000323347 PTPN23Q9H3S7 1636 aa22.89■■□□□ 1.25
SMARCD2-202ENST00000323347 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
SMARCD2-202ENST00000323347 NAIPQ13075 1403 aa22.86■■□□□ 1.25
SMARCD2-202ENST00000323347 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
SMARCD2-202ENST00000323347 MIA2Q96PC5 1412 aa22.85■■□□□ 1.25
SMARCD2-202ENST00000323347 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
SMARCD2-202ENST00000323347 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
SMARCD2-202ENST00000323347 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
SMARCD2-202ENST00000323347 KIAA0556O60303 1618 aa22.83■■□□□ 1.25
SMARCD2-202ENST00000323347 AKNAQ7Z591 1439 aa22.83■■□□□ 1.24
SMARCD2-202ENST00000323347 SIN3AQ96ST3 1273 aa22.82■■□□□ 1.24
SMARCD2-202ENST00000323347 MAGI1Q96QZ7 1491 aaPredicted RBP22.82■■□□□ 1.24
SMARCD2-202ENST00000323347 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
SMARCD2-202ENST00000323347 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
SMARCD2-202ENST00000323347 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
SMARCD2-202ENST00000323347 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
SMARCD2-202ENST00000323347 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
SMARCD2-202ENST00000323347 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
SMARCD2-202ENST00000323347 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
SMARCD2-202ENST00000323347 YTHDC1Q96MU7 727 aaKnown RBP22.7■■□□□ 1.23
SMARCD2-202ENST00000323347 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
SMARCD2-202ENST00000323347 NUP160Q12769 1436 aa22.66■■□□□ 1.22
SMARCD2-202ENST00000323347 ROCK1Q13464 1354 aa22.64■■□□□ 1.21
SMARCD2-202ENST00000323347 TONSLQ96HA7 1378 aa22.61■■□□□ 1.21
SMARCD2-202ENST00000323347 RIMBP3CA6NJZ7 1639 aa22.61■■□□□ 1.21
SMARCD2-202ENST00000323347 RIMBP3BA6NNM3 1639 aa22.61■■□□□ 1.21
SMARCD2-202ENST00000323347 RIMBP3Q9UFD9 1639 aa22.61■■□□□ 1.21
SMARCD2-202ENST00000323347 CDK11AQ9UQ88 783 aaPredicted RBP22.61■■□□□ 1.21
SMARCD2-202ENST00000323347 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
SMARCD2-202ENST00000323347 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
SMARCD2-202ENST00000323347 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
SMARCD2-202ENST00000323347 DNMT1P26358 1616 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-202ENST00000323347 DAPK1P53355 1430 aa22.57■■□□□ 1.2
SMARCD2-202ENST00000323347 TROQ12816 1431 aaPredicted RBP22.57■■□□□ 1.2
SMARCD2-202ENST00000323347 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
SMARCD2-202ENST00000323347 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
SMARCD2-202ENST00000323347 KDM6BO15054 1643 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms