RNA–Protein interactions for RNA: ENST00000321949.12

CRTC1-201, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC1, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-201ENST00000321949 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
CRTC1-201ENST00000321949 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
CRTC1-201ENST00000321949 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
CRTC1-201ENST00000321949 SUPT16HQ9Y5B9 1047 aaKnown RBP25.81■■□□□ 1.72
CRTC1-201ENST00000321949 MYT1Q01538 1121 aa25.8■■□□□ 1.72
CRTC1-201ENST00000321949 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
CRTC1-201ENST00000321949 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
CRTC1-201ENST00000321949 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
CRTC1-201ENST00000321949 CARMIL1Q5VZK9 1371 aa25.76■■□□□ 1.71
CRTC1-201ENST00000321949 KCNH8Q96L42 1107 aa25.74■■□□□ 1.71
CRTC1-201ENST00000321949 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
CRTC1-201ENST00000321949 MAPKBP1O60336 1514 aa25.69■■□□□ 1.7
CRTC1-201ENST00000321949 TIAM1Q13009 1591 aa25.66■■□□□ 1.7
CRTC1-201ENST00000321949 FAM50AQ14320 339 aaKnown RBP25.65■■□□□ 1.7
CRTC1-201ENST00000321949 P3H3Q8IVL6 736 aa25.65■■□□□ 1.7
CRTC1-201ENST00000321949 SIN3AQ96ST3 1273 aa25.64■■□□□ 1.69
CRTC1-201ENST00000321949 PHLDB1Q86UU1 1377 aa25.64■■□□□ 1.69
CRTC1-201ENST00000321949 CUL7Q14999 1698 aa25.63■■□□□ 1.69
CRTC1-201ENST00000321949 ATP1B4Q9UN42 357 aaPredicted RBP25.62■■□□□ 1.69
CRTC1-201ENST00000321949 SETD5Q9C0A6 1442 aa25.62■■□□□ 1.69
CRTC1-201ENST00000321949 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
CRTC1-201ENST00000321949 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
CRTC1-201ENST00000321949 DDX10Q13206 875 aaKnown RBP25.57■■□□□ 1.68
CRTC1-201ENST00000321949 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
CRTC1-201ENST00000321949 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
CRTC1-201ENST00000321949 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
CRTC1-201ENST00000321949 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.67
CRTC1-201ENST00000321949 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
CRTC1-201ENST00000321949 TDRD9Q8NDG6 1382 aaKnown RBP25.49■■□□□ 1.67
CRTC1-201ENST00000321949 TSHZ2Q9NRE2 1034 aa25.46■■□□□ 1.67
CRTC1-201ENST00000321949 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
CRTC1-201ENST00000321949 PCF11O94913 1555 aaKnown RBP25.44■■□□□ 1.66
CRTC1-201ENST00000321949 BCANQ96GW7 911 aa25.43■■□□□ 1.66
CRTC1-201ENST00000321949 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
CRTC1-201ENST00000321949 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
CRTC1-201ENST00000321949 PPP1R15AO75807 674 aaPredicted RBP25.38■■□□□ 1.65
CRTC1-201ENST00000321949 WDR62O43379 1518 aa25.37■■□□□ 1.65
CRTC1-201ENST00000321949 CFAP43Q8NDM7 1665 aa25.36■■□□□ 1.65
CRTC1-201ENST00000321949 EFCAB5A4FU69 1503 aa25.36■■□□□ 1.65
CRTC1-201ENST00000321949 FKBP8Q14318 412 aa25.33■■□□□ 1.65
CRTC1-201ENST00000321949 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
CRTC1-201ENST00000321949 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
CRTC1-201ENST00000321949 TIMELESSQ9UNS1 1208 aa25.29■■□□□ 1.64
CRTC1-201ENST00000321949 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
CRTC1-201ENST00000321949 FYCO1Q9BQS8 1478 aa25.26■■□□□ 1.63
CRTC1-201ENST00000321949 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
CRTC1-201ENST00000321949 CASKIN1Q8WXD9 1431 aa25.25■■□□□ 1.63
CRTC1-201ENST00000321949 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
CRTC1-201ENST00000321949 ANP32CO43423 234 aa25.23■■□□□ 1.63
CRTC1-201ENST00000321949 GRIN2BQ13224 1484 aa25.22■■□□□ 1.63
CRTC1-201ENST00000321949 ADAMTS12P58397 1594 aa25.21■■□□□ 1.63
CRTC1-201ENST00000321949 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.62
CRTC1-201ENST00000321949 TONSLQ96HA7 1378 aa25.2■■□□□ 1.62
CRTC1-201ENST00000321949 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
CRTC1-201ENST00000321949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.18■■□□□ 1.623e-6■■■■□ 26.4
CRTC1-201ENST00000321949 SAMD9Q5K651 1589 aa25.18■■□□□ 1.62
CRTC1-201ENST00000321949 CCER2I3L3R5 266 aa25.16■■□□□ 1.62
CRTC1-201ENST00000321949 PTPRKQ15262 1439 aa25.16■■□□□ 1.62
CRTC1-201ENST00000321949 ZNF608Q9ULD9 1512 aaPredicted RBP25.16■■□□□ 1.62
CRTC1-201ENST00000321949 MTUS2Q5JR59 1369 aa25.15■■□□□ 1.62
CRTC1-201ENST00000321949 CCDC18Q5T9S5 1454 aa25.15■■□□□ 1.62
CRTC1-201ENST00000321949 FMN1Q68DA7 1419 aa25.13■■□□□ 1.61
CRTC1-201ENST00000321949 NEFLP07196 543 aa25.12■■□□□ 1.61
CRTC1-201ENST00000321949 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
CRTC1-201ENST00000321949 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
CRTC1-201ENST00000321949 HFM1A2PYH4 1435 aa25.07■■□□□ 1.6
CRTC1-201ENST00000321949 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
CRTC1-201ENST00000321949 ANP32EQ9BTT0 268 aa25.07■■□□□ 1.6
CRTC1-201ENST00000321949 IQGAP2Q13576 1575 aa25.04■■□□□ 1.6
CRTC1-201ENST00000321949 PTPN23Q9H3S7 1636 aa25.03■■□□□ 1.6
CRTC1-201ENST00000321949 NAIPQ13075 1403 aa25.02■■□□□ 1.6
CRTC1-201ENST00000321949 NCOA2Q15596 1464 aa25.01■■□□□ 1.59
CRTC1-201ENST00000321949 MYOM3Q5VTT5 1437 aa24.98■■□□□ 1.59
CRTC1-201ENST00000321949 RRP7BPQ9NSQ0 103 aa24.98■■□□□ 1.59
CRTC1-201ENST00000321949 CHIC2Q9UKJ5 165 aa24.97■■□□□ 1.59
CRTC1-201ENST00000321949 LRRIQ1Q96JM4 1722 aa24.96■■□□□ 1.59
CRTC1-201ENST00000321949 RBM19Q9Y4C8 960 aaKnown RBP24.95■■□□□ 1.58
CRTC1-201ENST00000321949 MAGI1Q96QZ7 1491 aaPredicted RBP24.95■■□□□ 1.58
CRTC1-201ENST00000321949 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
CRTC1-201ENST00000321949 GRIN2AQ12879 1464 aa24.93■■□□□ 1.58
CRTC1-201ENST00000321949 HNRNPUQ00839 825 aaKnown RBP eCLIP24.92■■□□□ 1.58
CRTC1-201ENST00000321949 KDM5BQ9UGL1 1544 aa24.91■■□□□ 1.58
CRTC1-201ENST00000321949 KIAA0586Q9BVV6 1533 aa24.9■■□□□ 1.58
CRTC1-201ENST00000321949 HSPA5P11021 654 aaKnown RBP24.88■■□□□ 1.57
CRTC1-201ENST00000321949 WASHC2AQ641Q2 1341 aa24.88■■□□□ 1.57
CRTC1-201ENST00000321949 IRX6P78412 446 aaPredicted RBP24.87■■□□□ 1.57
CRTC1-201ENST00000321949 SUPT6HQ7KZ85 1726 aaKnown RBP24.86■■□□□ 1.57
CRTC1-201ENST00000321949 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
CRTC1-201ENST00000321949 MAGI3Q5TCQ9 1506 aa24.84■■□□□ 1.57
CRTC1-201ENST00000321949 ARID3CA6NKF2 412 aa24.83■■□□□ 1.57
CRTC1-201ENST00000321949 EHBP1L1Q8N3D4 1523 aa24.83■■□□□ 1.57
CRTC1-201ENST00000321949 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
CRTC1-201ENST00000321949 DENND4BO75064 1496 aaPredicted RBP24.81■■□□□ 1.56
CRTC1-201ENST00000321949 FOXD1Q16676 465 aa24.8■■□□□ 1.56
CRTC1-201ENST00000321949 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
CRTC1-201ENST00000321949 CHMP7Q8WUX9 453 aaPredicted RBP24.78■■□□□ 1.56
CRTC1-201ENST00000321949 CCDC184Q52MB2 194 aa24.77■■□□□ 1.56
CRTC1-201ENST00000321949 DISP1Q96F81 1524 aa24.77■■□□□ 1.56
CRTC1-201ENST00000321949 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
CRTC1-201ENST00000321949 EIF4G2P78344 907 aaKnown RBP eCLIP24.76■■□□□ 1.558e-8■■■■■ 50.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms