RNA–Protein interactions for RNA: ENST00000321949.12

CRTC1-201, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC1, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-201ENST00000321949 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.45
CRTC1-201ENST00000321949 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
CRTC1-201ENST00000321949 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
CRTC1-201ENST00000321949 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
CRTC1-201ENST00000321949 SUPT5HO00267 1087 aaKnown RBP30.78■■■□□ 2.52
CRTC1-201ENST00000321949 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
CRTC1-201ENST00000321949 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
CRTC1-201ENST00000321949 MYO15BQ96JP2 1530 aa29.97■■■□□ 2.39
CRTC1-201ENST00000321949 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
CRTC1-201ENST00000321949 HRCP23327 699 aa29.62■■■□□ 2.33
CRTC1-201ENST00000321949 ABCC9O60706 1549 aa29.52■■■□□ 2.32
CRTC1-201ENST00000321949 PCGF6Q9BYE7 350 aa29.51■■■□□ 2.31
CRTC1-201ENST00000321949 NACADO15069 1562 aa29.36■■■□□ 2.29
CRTC1-201ENST00000321949 LOC105371045A0A1W2PR82 267 aa29.24■■■□□ 2.27
CRTC1-201ENST00000321949 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
CRTC1-201ENST00000321949 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.26
CRTC1-201ENST00000321949 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
CRTC1-201ENST00000321949 TRIM26Q12899 539 aaPredicted RBP28.72■■■□□ 2.19
CRTC1-201ENST00000321949 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
CRTC1-201ENST00000321949 TRIM41Q8WV44 630 aa28.54■■■□□ 2.16
CRTC1-201ENST00000321949 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
CRTC1-201ENST00000321949 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.15
CRTC1-201ENST00000321949 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
CRTC1-201ENST00000321949 EHMT2Q96KQ7 1210 aa28.36■■■□□ 2.13
CRTC1-201ENST00000321949 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
CRTC1-201ENST00000321949 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
CRTC1-201ENST00000321949 ZEB1P37275 1124 aaPredicted RBP28.14■■■□□ 2.1
CRTC1-201ENST00000321949 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
CRTC1-201ENST00000321949 WIZO95785 1651 aa28.09■■■□□ 2.09
CRTC1-201ENST00000321949 SMARCA4P51532 1647 aa28.01■■■□□ 2.08
CRTC1-201ENST00000321949 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.07
CRTC1-201ENST00000321949 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
CRTC1-201ENST00000321949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
CRTC1-201ENST00000321949 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
CRTC1-201ENST00000321949 SCAF1Q9H7N4 1312 aaKnown RBP27.58■■■□□ 2.01
CRTC1-201ENST00000321949 SMARCA2P51531 1590 aa27.56■■■□□ 2
CRTC1-201ENST00000321949 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
CRTC1-201ENST00000321949 CCER1Q8TC90 406 aaPredicted RBP27.55■■■□□ 2
CRTC1-201ENST00000321949 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
CRTC1-201ENST00000321949 TTBK1Q5TCY1 1321 aaPredicted RBP27.51■■□□□ 1.99
CRTC1-201ENST00000321949 ABCC8Q09428 1581 aa27.48■■□□□ 1.99
CRTC1-201ENST00000321949 ATAD2BQ9ULI0 1458 aa27.43■■□□□ 1.98
CRTC1-201ENST00000321949 SOGA1O94964 1423 aa27.31■■□□□ 1.96
CRTC1-201ENST00000321949 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
CRTC1-201ENST00000321949 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
CRTC1-201ENST00000321949 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
CRTC1-201ENST00000321949 RUSC2Q8N2Y8 1516 aa27.18■■□□□ 1.94
CRTC1-201ENST00000321949 UBTFP17480 764 aaKnown RBP27.18■■□□□ 1.94
CRTC1-201ENST00000321949 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
CRTC1-201ENST00000321949 DIEXFQ68CQ4 756 aaKnown RBP27.17■■□□□ 1.94
CRTC1-201ENST00000321949 TNIKQ9UKE5 1360 aa27.16■■□□□ 1.94
CRTC1-201ENST00000321949 NEUROD1Q13562 356 aa27.15■■□□□ 1.94
CRTC1-201ENST00000321949 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
CRTC1-201ENST00000321949 ACIN1Q9UKV3 1341 aaKnown RBP27.14■■□□□ 1.94
CRTC1-201ENST00000321949 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
CRTC1-201ENST00000321949 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
CRTC1-201ENST00000321949 EEA1Q15075 1411 aa27■■□□□ 1.91
CRTC1-201ENST00000321949 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
CRTC1-201ENST00000321949 GTF3C3Q9Y5Q9 886 aa26.91■■□□□ 1.9
CRTC1-201ENST00000321949 CENPBP07199 599 aaPredicted RBP26.89■■□□□ 1.89
CRTC1-201ENST00000321949 HNRNPUL2Q1KMD3 747 aaKnown RBP26.83■■□□□ 1.89
CRTC1-201ENST00000321949 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
CRTC1-201ENST00000321949 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
CRTC1-201ENST00000321949 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
CRTC1-201ENST00000321949 RANGAP1P46060 587 aaPredicted RBP26.72■■□□□ 1.87
CRTC1-201ENST00000321949 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
CRTC1-201ENST00000321949 CLIP1P30622 1438 aa26.71■■□□□ 1.87
CRTC1-201ENST00000321949 YTHDC1Q96MU7 727 aaKnown RBP26.69■■□□□ 1.86
CRTC1-201ENST00000321949 CFTRP13569 1480 aa26.64■■□□□ 1.86
CRTC1-201ENST00000321949 KIF21BO75037 1637 aa26.63■■□□□ 1.85
CRTC1-201ENST00000321949 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
CRTC1-201ENST00000321949 RAPGEF2Q9Y4G8 1499 aa26.59■■□□□ 1.85
CRTC1-201ENST00000321949 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
CRTC1-201ENST00000321949 APLP2Q06481 763 aa26.58■■□□□ 1.85
CRTC1-201ENST00000321949 MIER1Q8N108 512 aa26.58■■□□□ 1.85
CRTC1-201ENST00000321949 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
CRTC1-201ENST00000321949 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
CRTC1-201ENST00000321949 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
CRTC1-201ENST00000321949 CUX1P39880 1505 aa26.42■■□□□ 1.82
CRTC1-201ENST00000321949 KANK4Q5T7N3 995 aaPredicted RBP26.26■■□□□ 1.79
CRTC1-201ENST00000321949 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
CRTC1-201ENST00000321949 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
CRTC1-201ENST00000321949 PRXQ9BXM0 1461 aa26.19■■□□□ 1.78
CRTC1-201ENST00000321949 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
CRTC1-201ENST00000321949 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
CRTC1-201ENST00000321949 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
CRTC1-201ENST00000321949 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
CRTC1-201ENST00000321949 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
CRTC1-201ENST00000321949 NESP48681 1621 aa26.08■■□□□ 1.77
CRTC1-201ENST00000321949 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
CRTC1-201ENST00000321949 ITGAEP38570 1179 aa26.04■■□□□ 1.76
CRTC1-201ENST00000321949 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
CRTC1-201ENST00000321949 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
CRTC1-201ENST00000321949 CUX2O14529 1486 aa25.99■■□□□ 1.75
CRTC1-201ENST00000321949 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
CRTC1-201ENST00000321949 CCNB3Q8WWL7 1395 aa25.94■■□□□ 1.74
CRTC1-201ENST00000321949 ARHGAP35Q9NRY4 1499 aa25.93■■□□□ 1.74
CRTC1-201ENST00000321949 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
CRTC1-201ENST00000321949 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
CRTC1-201ENST00000321949 IGF1RP08069 1367 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms