RNA–Protein interactions for RNA: ENST00000320211.8

ATRIP-201, Transcript of ATR interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATRIP, Length 2,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-201ENST00000320211 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
ATRIP-201ENST00000320211 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
ATRIP-201ENST00000320211 ITGAEP38570 1179 aa27.66■■■□□ 2.02
ATRIP-201ENST00000320211 ATP1B4Q9UN42 357 aaPredicted RBP27.66■■■□□ 2.02
ATRIP-201ENST00000320211 FHOD3Q2V2M9 1422 aa27.65■■■□□ 2.02
ATRIP-201ENST00000320211 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
ATRIP-201ENST00000320211 LRRC9Q6ZRR7 1453 aa27.64■■■□□ 2.01
ATRIP-201ENST00000320211 PCF11O94913 1555 aaKnown RBP27.63■■■□□ 2.01
ATRIP-201ENST00000320211 CTTNBP2Q8WZ74 1663 aa27.63■■■□□ 2.01
ATRIP-201ENST00000320211 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
ATRIP-201ENST00000320211 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
ATRIP-201ENST00000320211 EFCAB5A4FU69 1503 aa27.57■■■□□ 2
ATRIP-201ENST00000320211 CLSPNQ9HAW4 1339 aa27.57■■■□□ 2
ATRIP-201ENST00000320211 CFAP43Q8NDM7 1665 aa27.55■■■□□ 2
ATRIP-201ENST00000320211 PHLDB1Q86UU1 1377 aa27.53■■■□□ 2
ATRIP-201ENST00000320211 FYCO1Q9BQS8 1478 aa27.5■■□□□ 1.99
ATRIP-201ENST00000320211 CASKIN1Q8WXD9 1431 aa27.48■■□□□ 1.99
ATRIP-201ENST00000320211 TARBP1Q13395 1621 aaKnown RBP27.46■■□□□ 1.99
ATRIP-201ENST00000320211 FAM50AQ14320 339 aaKnown RBP27.45■■□□□ 1.98
ATRIP-201ENST00000320211 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
ATRIP-201ENST00000320211 FMN1Q68DA7 1419 aa27.43■■□□□ 1.98
ATRIP-201ENST00000320211 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
ATRIP-201ENST00000320211 RAB3GAP2Q9H2M9 1393 aa27.42■■□□□ 1.98
ATRIP-201ENST00000320211 SAMD9Q5K651 1589 aa27.36■■□□□ 1.97
ATRIP-201ENST00000320211 SNAPC4Q5SXM2 1469 aa27.36■■□□□ 1.97
ATRIP-201ENST00000320211 ACIN1Q9UKV3 1341 aaKnown RBP27.33■■□□□ 1.97
ATRIP-201ENST00000320211 NEUROD1Q13562 356 aa27.33■■□□□ 1.97
ATRIP-201ENST00000320211 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.96
ATRIP-201ENST00000320211 PBRM1Q86U86 1689 aa27.31■■□□□ 1.96
ATRIP-201ENST00000320211 MRC2Q9UBG0 1479 aa27.31■■□□□ 1.96
ATRIP-201ENST00000320211 MIER1Q8N108 512 aa27.28■■□□□ 1.96
ATRIP-201ENST00000320211 MTUS2Q5JR59 1369 aa27.26■■□□□ 1.95
ATRIP-201ENST00000320211 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.95
ATRIP-201ENST00000320211 CENPBP07199 599 aaPredicted RBP27.25■■□□□ 1.95
ATRIP-201ENST00000320211 MAPKBP1O60336 1514 aa27.23■■□□□ 1.95
ATRIP-201ENST00000320211 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
ATRIP-201ENST00000320211 FGD6Q6ZV73 1430 aa27.18■■□□□ 1.94
ATRIP-201ENST00000320211 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
ATRIP-201ENST00000320211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.94
ATRIP-201ENST00000320211 YTHDC1Q96MU7 727 aaKnown RBP27.15■■□□□ 1.94
ATRIP-201ENST00000320211 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
ATRIP-201ENST00000320211 IQGAP2Q13576 1575 aa27.14■■□□□ 1.94
ATRIP-201ENST00000320211 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
ATRIP-201ENST00000320211 NCOA2Q15596 1464 aa27.11■■□□□ 1.93
ATRIP-201ENST00000320211 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
ATRIP-201ENST00000320211 WDR62O43379 1518 aa27.09■■□□□ 1.93
ATRIP-201ENST00000320211 SIN3AQ96ST3 1273 aa27.07■■□□□ 1.92
ATRIP-201ENST00000320211 SUPT6HQ7KZ85 1726 aaKnown RBP27.07■■□□□ 1.92
ATRIP-201ENST00000320211 EHBP1L1Q8N3D4 1523 aa27.06■■□□□ 1.92
ATRIP-201ENST00000320211 MYOM3Q5VTT5 1437 aa27.05■■□□□ 1.92
ATRIP-201ENST00000320211 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
ATRIP-201ENST00000320211 PTPRKQ15262 1439 aa27.02■■□□□ 1.92
ATRIP-201ENST00000320211 CCDC18Q5T9S5 1454 aa27.02■■□□□ 1.92
ATRIP-201ENST00000320211 GTF3C3Q9Y5Q9 886 aa27.01■■□□□ 1.91
ATRIP-201ENST00000320211 HECW1Q76N89 1606 aa27■■□□□ 1.91
ATRIP-201ENST00000320211 ERCC6Q03468 1493 aa26.98■■□□□ 1.91
ATRIP-201ENST00000320211 ARID3CA6NKF2 412 aa26.98■■□□□ 1.91
ATRIP-201ENST00000320211 UGGT2Q9NYU1 1516 aa26.98■■□□□ 1.91
ATRIP-201ENST00000320211 EPRSP07814 1512 aaKnown RBP26.96■■□□□ 1.91
ATRIP-201ENST00000320211 EIF4G3O43432 1585 aaKnown RBP26.94■■□□□ 1.9
ATRIP-201ENST00000320211 PTPN23Q9H3S7 1636 aa26.94■■□□□ 1.9
ATRIP-201ENST00000320211 ARHGEF11O15085 1522 aa26.94■■□□□ 1.9
ATRIP-201ENST00000320211 CDK13Q14004 1512 aaKnown RBP26.94■■□□□ 1.9
ATRIP-201ENST00000320211 HFM1A2PYH4 1435 aa26.94■■□□□ 1.9
ATRIP-201ENST00000320211 KIAA0586Q9BVV6 1533 aa26.9■■□□□ 1.9
ATRIP-201ENST00000320211 GRIN2AQ12879 1464 aa26.88■■□□□ 1.89
ATRIP-201ENST00000320211 NAIPQ13075 1403 aa26.88■■□□□ 1.89
ATRIP-201ENST00000320211 DISP1Q96F81 1524 aa26.86■■□□□ 1.89
ATRIP-201ENST00000320211 KIAA0556O60303 1618 aa26.85■■□□□ 1.89
ATRIP-201ENST00000320211 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
ATRIP-201ENST00000320211 UACAQ9BZF9 1416 aa26.84■■□□□ 1.89
ATRIP-201ENST00000320211 CHIC2Q9UKJ5 165 aa26.83■■□□□ 1.89
ATRIP-201ENST00000320211 RRP7BPQ9NSQ0 103 aa26.81■■□□□ 1.88
ATRIP-201ENST00000320211 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
ATRIP-201ENST00000320211 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
ATRIP-201ENST00000320211 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
ATRIP-201ENST00000320211 FBLN2P98095 1184 aa26.78■■□□□ 1.88
ATRIP-201ENST00000320211 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
ATRIP-201ENST00000320211 MIA2Q96PC5 1412 aa26.74■■□□□ 1.87
ATRIP-201ENST00000320211 NUP153P49790 1475 aaKnown RBP26.73■■□□□ 1.87
ATRIP-201ENST00000320211 TONSLQ96HA7 1378 aa26.72■■□□□ 1.87
ATRIP-201ENST00000320211 RAPGEF6Q8TEU7 1601 aa26.72■■□□□ 1.87
ATRIP-201ENST00000320211 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
ATRIP-201ENST00000320211 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
ATRIP-201ENST00000320211 HIRIP3Q9BW71 556 aaPredicted RBP26.68■■□□□ 1.86
ATRIP-201ENST00000320211 GCC2Q8IWJ2 1684 aa26.67■■□□□ 1.86
ATRIP-201ENST00000320211 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
ATRIP-201ENST00000320211 DDX10Q13206 875 aaKnown RBP26.64■■□□□ 1.86
ATRIP-201ENST00000320211 CDK11AQ9UQ88 783 aaPredicted RBP26.64■■□□□ 1.86
ATRIP-201ENST00000320211 KDM6BO15054 1643 aa26.64■■□□□ 1.85
ATRIP-201ENST00000320211 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
ATRIP-201ENST00000320211 PLB1Q6P1J6 1458 aa26.61■■□□□ 1.85
ATRIP-201ENST00000320211 JPH4Q96JJ6 628 aa26.6■■□□□ 1.85
ATRIP-201ENST00000320211 ZNF644Q9H582 1327 aaPredicted RBP26.6■■□□□ 1.85
ATRIP-201ENST00000320211 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
ATRIP-201ENST00000320211 DAPK1P53355 1430 aa26.57■■□□□ 1.84
ATRIP-201ENST00000320211 NUP160Q12769 1436 aa26.56■■□□□ 1.84
ATRIP-201ENST00000320211 DENND4BO75064 1496 aaPredicted RBP26.56■■□□□ 1.84
ATRIP-201ENST00000320211 CARMIL2Q6F5E8 1435 aa26.55■■□□□ 1.84
ATRIP-201ENST00000320211 KCNH8Q96L42 1107 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms