RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
SHISA2-201ENST00000319420 FBLN2P98095 1184 aa23.89■■□□□ 1.41
SHISA2-201ENST00000319420 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
SHISA2-201ENST00000319420 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
SHISA2-201ENST00000319420 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
SHISA2-201ENST00000319420 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
SHISA2-201ENST00000319420 CUL7Q14999 1698 aa23.83■■□□□ 1.41
SHISA2-201ENST00000319420 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
SHISA2-201ENST00000319420 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
SHISA2-201ENST00000319420 PCF11O94913 1555 aaKnown RBP23.76■■□□□ 1.39
SHISA2-201ENST00000319420 CCNB3Q8WWL7 1395 aa23.75■■□□□ 1.39
SHISA2-201ENST00000319420 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
SHISA2-201ENST00000319420 TIAM1Q13009 1591 aa23.71■■□□□ 1.39
SHISA2-201ENST00000319420 PHLDB1Q86UU1 1377 aa23.71■■□□□ 1.39
SHISA2-201ENST00000319420 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
SHISA2-201ENST00000319420 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
SHISA2-201ENST00000319420 CTTNBP2Q8WZ74 1663 aa23.69■■□□□ 1.38
SHISA2-201ENST00000319420 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
SHISA2-201ENST00000319420 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
SHISA2-201ENST00000319420 WDR62O43379 1518 aa23.65■■□□□ 1.38
SHISA2-201ENST00000319420 RRBP1Q9P2E9 1410 aaKnown RBP23.64■■□□□ 1.38
SHISA2-201ENST00000319420 FMN1Q68DA7 1419 aa23.64■■□□□ 1.37
SHISA2-201ENST00000319420 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
SHISA2-201ENST00000319420 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
SHISA2-201ENST00000319420 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
SHISA2-201ENST00000319420 EFCAB5A4FU69 1503 aa23.63■■□□□ 1.37
SHISA2-201ENST00000319420 CASKIN1Q8WXD9 1431 aa23.61■■□□□ 1.37
SHISA2-201ENST00000319420 FYCO1Q9BQS8 1478 aa23.58■■□□□ 1.36
SHISA2-201ENST00000319420 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
SHISA2-201ENST00000319420 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
SHISA2-201ENST00000319420 DHX57Q6P158 1386 aaKnown RBP23.51■■□□□ 1.35
SHISA2-201ENST00000319420 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
SHISA2-201ENST00000319420 THOC2Q8NI27 1593 aaKnown RBP23.49■■□□□ 1.35
SHISA2-201ENST00000319420 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
SHISA2-201ENST00000319420 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
SHISA2-201ENST00000319420 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
SHISA2-201ENST00000319420 RAB3GAP2Q9H2M9 1393 aa23.47■■□□□ 1.35
SHISA2-201ENST00000319420 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
SHISA2-201ENST00000319420 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
SHISA2-201ENST00000319420 CHIC2Q9UKJ5 165 aa23.42■■□□□ 1.34
SHISA2-201ENST00000319420 ZNF316A6NFI3 1004 aaPredicted RBP23.41■■□□□ 1.34
SHISA2-201ENST00000319420 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.34
SHISA2-201ENST00000319420 NEUROD1Q13562 356 aa23.39■■□□□ 1.33
SHISA2-201ENST00000319420 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
SHISA2-201ENST00000319420 KIAA0586Q9BVV6 1533 aa23.37■■□□□ 1.33
SHISA2-201ENST00000319420 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
SHISA2-201ENST00000319420 FGD6Q6ZV73 1430 aa23.35■■□□□ 1.33
SHISA2-201ENST00000319420 LRRIQ1Q96JM4 1722 aa23.35■■□□□ 1.33
SHISA2-201ENST00000319420 SETD5Q9C0A6 1442 aa23.34■■□□□ 1.33
SHISA2-201ENST00000319420 SYNJ2O15056 1496 aa23.33■■□□□ 1.32
SHISA2-201ENST00000319420 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
SHISA2-201ENST00000319420 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
SHISA2-201ENST00000319420 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
SHISA2-201ENST00000319420 RRP7BPQ9NSQ0 103 aa23.31■■□□□ 1.32
SHISA2-201ENST00000319420 DISP1Q96F81 1524 aa23.31■■□□□ 1.32
SHISA2-201ENST00000319420 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
SHISA2-201ENST00000319420 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
SHISA2-201ENST00000319420 UGGT2Q9NYU1 1516 aa23.27■■□□□ 1.32
SHISA2-201ENST00000319420 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
SHISA2-201ENST00000319420 PTPRKQ15262 1439 aa23.25■■□□□ 1.31
SHISA2-201ENST00000319420 PLB1Q6P1J6 1458 aa23.24■■□□□ 1.31
SHISA2-201ENST00000319420 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
SHISA2-201ENST00000319420 ZNF777Q9ULD5 760 aaPredicted RBP23.23■■□□□ 1.31
SHISA2-201ENST00000319420 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
SHISA2-201ENST00000319420 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
SHISA2-201ENST00000319420 ZNF644Q9H582 1327 aaPredicted RBP23.22■■□□□ 1.31
SHISA2-201ENST00000319420 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
SHISA2-201ENST00000319420 EHBP1L1Q8N3D4 1523 aa23.2■■□□□ 1.3
SHISA2-201ENST00000319420 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
SHISA2-201ENST00000319420 SUPT6HQ7KZ85 1726 aaKnown RBP23.17■■□□□ 1.3
SHISA2-201ENST00000319420 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
SHISA2-201ENST00000319420 TRIM52Q96A61 297 aa23.16■■□□□ 1.3
SHISA2-201ENST00000319420 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
SHISA2-201ENST00000319420 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
SHISA2-201ENST00000319420 NUP160Q12769 1436 aa23.13■■□□□ 1.29
SHISA2-201ENST00000319420 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
SHISA2-201ENST00000319420 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
SHISA2-201ENST00000319420 PTPN23Q9H3S7 1636 aa23.08■■□□□ 1.29
SHISA2-201ENST00000319420 MIER1Q8N108 512 aa23.08■■□□□ 1.29
SHISA2-201ENST00000319420 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
SHISA2-201ENST00000319420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.07■■□□□ 1.28
SHISA2-201ENST00000319420 RAPGEF6Q8TEU7 1601 aa23.07■■□□□ 1.28
SHISA2-201ENST00000319420 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
SHISA2-201ENST00000319420 HIRIP3Q9BW71 556 aaPredicted RBP23.07■■□□□ 1.28
SHISA2-201ENST00000319420 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
SHISA2-201ENST00000319420 FOXD1Q16676 465 aa23.04■■□□□ 1.28
SHISA2-201ENST00000319420 NAIPQ13075 1403 aa23.03■■□□□ 1.28
SHISA2-201ENST00000319420 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
SHISA2-201ENST00000319420 PTPRGP23470 1445 aa23.01■■□□□ 1.27
SHISA2-201ENST00000319420 MYT1Q01538 1121 aa23■■□□□ 1.27
SHISA2-201ENST00000319420 ARHGEF11O15085 1522 aa23■■□□□ 1.27
SHISA2-201ENST00000319420 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
SHISA2-201ENST00000319420 TROQ12816 1431 aaPredicted RBP22.95■■□□□ 1.27
SHISA2-201ENST00000319420 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
SHISA2-201ENST00000319420 CHD1O14646 1710 aa22.92■■□□□ 1.26
SHISA2-201ENST00000319420 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
SHISA2-201ENST00000319420 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
SHISA2-201ENST00000319420 ATP10BO94823 1461 aa22.9■■□□□ 1.26
SHISA2-201ENST00000319420 UACAQ9BZF9 1416 aa22.9■■□□□ 1.26
SHISA2-201ENST00000319420 KIF14Q15058 1648 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms