RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 IGF1RP08069 1367 aa15.94■□□□□ 0.14
KARS-202ENST00000319410 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
KARS-202ENST00000319410 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
KARS-202ENST00000319410 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
KARS-202ENST00000319410 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
KARS-202ENST00000319410 CUL7Q14999 1698 aa15.86■□□□□ 0.13
KARS-202ENST00000319410 CARMIL1Q5VZK9 1371 aa15.84■□□□□ 0.13
KARS-202ENST00000319410 KIAA0586Q9BVV6 1533 aa15.8■□□□□ 0.12
KARS-202ENST00000319410 CHIC1Q5VXU3 224 aa15.78■□□□□ 0.12
KARS-202ENST00000319410 RAPGEF2Q9Y4G8 1499 aa15.7■□□□□ 0.1
KARS-202ENST00000319410 EEA1Q15075 1411 aa15.69■□□□□ 0.1
KARS-202ENST00000319410 IQGAP2Q13576 1575 aa15.69■□□□□ 0.1
KARS-202ENST00000319410 ADCY10Q96PN6 1610 aa15.68■□□□□ 0.1
KARS-202ENST00000319410 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
KARS-202ENST00000319410 PTPRGP23470 1445 aa15.66■□□□□ 0.1
KARS-202ENST00000319410 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
KARS-202ENST00000319410 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
KARS-202ENST00000319410 KIF13AQ9H1H9 1805 aa15.63■□□□□ 0.09
KARS-202ENST00000319410 DISP1Q96F81 1524 aa15.62■□□□□ 0.09
KARS-202ENST00000319410 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
KARS-202ENST00000319410 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
KARS-202ENST00000319410 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
KARS-202ENST00000319410 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
KARS-202ENST00000319410 PRXQ9BXM0 1461 aa15.58■□□□□ 0.08
KARS-202ENST00000319410 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
KARS-202ENST00000319410 UGGT2Q9NYU1 1516 aa15.57■□□□□ 0.08
KARS-202ENST00000319410 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
KARS-202ENST00000319410 ABCC10Q5T3U5 1492 aa15.57■□□□□ 0.08
KARS-202ENST00000319410 CTTNBP2Q8WZ74 1663 aa15.56■□□□□ 0.08
KARS-202ENST00000319410 KIAA0556O60303 1618 aa15.55■□□□□ 0.08
KARS-202ENST00000319410 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
KARS-202ENST00000319410 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
KARS-202ENST00000319410 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
KARS-202ENST00000319410 UACAQ9BZF9 1416 aa15.52■□□□□ 0.08
KARS-202ENST00000319410 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
KARS-202ENST00000319410 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
KARS-202ENST00000319410 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
KARS-202ENST00000319410 UHRF1BP1LA0JNW5 1464 aa15.48■□□□□ 0.07
KARS-202ENST00000319410 PLB1Q6P1J6 1458 aa15.48■□□□□ 0.07
KARS-202ENST00000319410 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
KARS-202ENST00000319410 KIF21BO75037 1637 aa15.47■□□□□ 0.07
KARS-202ENST00000319410 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
KARS-202ENST00000319410 GOLGA3Q08378 1498 aa15.45■□□□□ 0.06
KARS-202ENST00000319410 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
KARS-202ENST00000319410 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
KARS-202ENST00000319410 ARID3CA6NKF2 412 aa15.43■□□□□ 0.06
KARS-202ENST00000319410 APLP2Q06481 763 aa15.41■□□□□ 0.06
KARS-202ENST00000319410 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
KARS-202ENST00000319410 ABCA8O94911 1581 aa15.39■□□□□ 0.05
KARS-202ENST00000319410 KDM6BO15054 1643 aa15.38■□□□□ 0.05
KARS-202ENST00000319410 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
KARS-202ENST00000319410 AEBP2Q6ZN18 517 aaPredicted RBP15.36■□□□□ 0.05
KARS-202ENST00000319410 GLI2P10070 1586 aa15.36■□□□□ 0.05
KARS-202ENST00000319410 PPRC1Q5VV67 1664 aaKnown RBP15.36■□□□□ 0.05
KARS-202ENST00000319410 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
KARS-202ENST00000319410 SAMD9Q5K651 1589 aa15.34■□□□□ 0.05
KARS-202ENST00000319410 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
KARS-202ENST00000319410 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
KARS-202ENST00000319410 FHOD3Q2V2M9 1422 aa15.32■□□□□ 0.04
KARS-202ENST00000319410 PPARGC1BQ86YN6 1023 aaKnown RBP15.31■□□□□ 0.04
KARS-202ENST00000319410 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
KARS-202ENST00000319410 ATP10BO94823 1461 aa15.29■□□□□ 0.04
KARS-202ENST00000319410 COL17A1Q9UMD9 1497 aaPredicted RBP15.28■□□□□ 0.04
KARS-202ENST00000319410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
KARS-202ENST00000319410 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
KARS-202ENST00000319410 RAPGEF6Q8TEU7 1601 aa15.27■□□□□ 0.03
KARS-202ENST00000319410 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
KARS-202ENST00000319410 TEX14Q8IWB6 1497 aa15.23■□□□□ 0.03
KARS-202ENST00000319410 NUP153P49790 1475 aaKnown RBP15.23■□□□□ 0.03
KARS-202ENST00000319410 EFCAB5A4FU69 1503 aa15.23■□□□□ 0.03
KARS-202ENST00000319410 CFAP43Q8NDM7 1665 aa15.21■□□□□ 0.03
KARS-202ENST00000319410 SLC24A1O60721 1099 aa15.21■□□□□ 0.02
KARS-202ENST00000319410 KDM4FA0A1W2PPD8 638 aa15.19■□□□□ 0.02
KARS-202ENST00000319410 MAGI3Q5TCQ9 1506 aa15.18■□□□□ 0.02
KARS-202ENST00000319410 CENPBP07199 599 aaPredicted RBP15.17■□□□□ 0.02
KARS-202ENST00000319410 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
KARS-202ENST00000319410 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
KARS-202ENST00000319410 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
KARS-202ENST00000319410 ABCA9Q8IUA7 1624 aa15.14■□□□□ 0.01
KARS-202ENST00000319410 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
KARS-202ENST00000319410 ADGRL1O94910 1474 aa15.09■□□□□ 0.01
KARS-202ENST00000319410 RAPGEF3O95398 923 aa15.08■□□□□ 0.01
KARS-202ENST00000319410 CLIP1P30622 1438 aa15.08■□□□□ 0
KARS-202ENST00000319410 FMN1Q68DA7 1419 aa15.08■□□□□ 0
KARS-202ENST00000319410 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
KARS-202ENST00000319410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.06■□□□□ 0
KARS-202ENST00000319410 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
KARS-202ENST00000319410 TTC37Q6PGP7 1564 aa15.05■□□□□ 0
KARS-202ENST00000319410 HECW1Q76N89 1606 aa15.05■□□□□ -0
KARS-202ENST00000319410 CEP162Q5TB80 1403 aa15.04■□□□□ -0
KARS-202ENST00000319410 NEO1Q92859 1461 aa15.02■□□□□ -0
KARS-202ENST00000319410 LRRIQ1Q96JM4 1722 aa15.02□□□□□ -0.01
KARS-202ENST00000319410 FANCAO15360 1455 aa15.01□□□□□ -0.01
KARS-202ENST00000319410 FRMPD1Q5SYB0 1578 aa15□□□□□ -0.01
KARS-202ENST00000319410 ACIN1Q9UKV3 1341 aaKnown RBP15□□□□□ -0.01
KARS-202ENST00000319410 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
KARS-202ENST00000319410 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
KARS-202ENST00000319410 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
KARS-202ENST00000319410 KIF14Q15058 1648 aa14.98□□□□□ -0.01
KARS-202ENST00000319410 PCGF6Q9BYE7 350 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms