RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 CUL7Q14999 1698 aa35.04■■■■□ 3.2
SERF1A-201ENST00000317633 IGF1RP08069 1367 aa35.02■■■■□ 3.2
SERF1A-201ENST00000317633 KIAA0586Q9BVV6 1533 aa34.94■■■■□ 3.18
SERF1A-201ENST00000317633 NPM1P06748 294 aaKnown RBP eCLIP34.84■■■■□ 3.17
SERF1A-201ENST00000317633 CARMIL1Q5VZK9 1371 aa34.83■■■■□ 3.17
SERF1A-201ENST00000317633 KIF13AQ9H1H9 1805 aa34.83■■■■□ 3.17
SERF1A-201ENST00000317633 ADCY10Q96PN6 1610 aa34.72■■■■□ 3.15
SERF1A-201ENST00000317633 MAPKBP1O60336 1514 aa34.71■■■■□ 3.15
SERF1A-201ENST00000317633 ABCC10Q5T3U5 1492 aa34.66■■■■□ 3.14
SERF1A-201ENST00000317633 FAM69CQ0P6D2 419 aa34.65■■■■□ 3.14
SERF1A-201ENST00000317633 AEBP2Q6ZN18 517 aaPredicted RBP34.65■■■■□ 3.14
SERF1A-201ENST00000317633 CARMIL2Q6F5E8 1435 aa34.64■■■■□ 3.14
SERF1A-201ENST00000317633 PTPRGP23470 1445 aa34.62■■■■□ 3.13
SERF1A-201ENST00000317633 IQGAP2Q13576 1575 aa34.62■■■■□ 3.13
SERF1A-201ENST00000317633 DIP2BQ9P265 1576 aa34.57■■■■□ 3.13
SERF1A-201ENST00000317633 TNIKQ9UKE5 1360 aa34.56■■■■□ 3.12
SERF1A-201ENST00000317633 RAPGEF2Q9Y4G8 1499 aa34.52■■■■□ 3.12
SERF1A-201ENST00000317633 TTBK1Q5TCY1 1321 aaPredicted RBP34.52■■■■□ 3.12
SERF1A-201ENST00000317633 ABCC2Q92887 1545 aa34.42■■■■□ 3.1
SERF1A-201ENST00000317633 DISP1Q96F81 1524 aa34.4■■■■□ 3.1
SERF1A-201ENST00000317633 TSPOAP1O95153 1857 aa34.38■■■■□ 3.09
SERF1A-201ENST00000317633 UGGT2Q9NYU1 1516 aa34.38■■■■□ 3.09
SERF1A-201ENST00000317633 UHRF1BP1LA0JNW5 1464 aa34.38■■■■□ 3.09
SERF1A-201ENST00000317633 UACAQ9BZF9 1416 aa34.35■■■■□ 3.09
SERF1A-201ENST00000317633 PLB1Q6P1J6 1458 aa34.32■■■■□ 3.08
SERF1A-201ENST00000317633 KDM6BO15054 1643 aa34.3■■■■□ 3.08
SERF1A-201ENST00000317633 ASXL2Q76L83 1435 aa34.3■■■■□ 3.08
SERF1A-201ENST00000317633 KIAA0556O60303 1618 aa34.29■■■■□ 3.08
SERF1A-201ENST00000317633 CTTNBP2Q8WZ74 1663 aa34.28■■■■□ 3.08
SERF1A-201ENST00000317633 GLI2P10070 1586 aa34.22■■■■□ 3.07
SERF1A-201ENST00000317633 KDM5BQ9UGL1 1544 aa34.2■■■■□ 3.07
SERF1A-201ENST00000317633 GOLGA3Q08378 1498 aa34.15■■■■□ 3.06
SERF1A-201ENST00000317633 ZCCHC11Q5TAX3 1644 aaKnown RBP34.14■■■■□ 3.06
SERF1A-201ENST00000317633 PRXQ9BXM0 1461 aa34.14■■■■□ 3.06
SERF1A-201ENST00000317633 EPRSP07814 1512 aaKnown RBP34.09■■■■□ 3.05
SERF1A-201ENST00000317633 PPRC1Q5VV67 1664 aaKnown RBP34.09■■■■□ 3.05
SERF1A-201ENST00000317633 MAP3K4Q9Y6R4 1608 aa34.03■■■■□ 3.04
SERF1A-201ENST00000317633 WDR7Q9Y4E6 1490 aa33.98■■■■□ 3.03
SERF1A-201ENST00000317633 TEX14Q8IWB6 1497 aa33.97■■■■□ 3.03
SERF1A-201ENST00000317633 FAM9AQ8IZU1 332 aaPredicted RBP33.97■■■■□ 3.03
SERF1A-201ENST00000317633 ABCA8O94911 1581 aa33.95■■■■□ 3.03
SERF1A-201ENST00000317633 CSRNP3Q8WYN3 585 aa33.92■■■■□ 3.02
SERF1A-201ENST00000317633 KDM4FA0A1W2PPD8 638 aa33.89■■■■□ 3.02
SERF1A-201ENST00000317633 CFAP43Q8NDM7 1665 aa33.82■■■■□ 3
SERF1A-201ENST00000317633 COL17A1Q9UMD9 1497 aaPredicted RBP33.82■■■■□ 3
SERF1A-201ENST00000317633 EEA1Q15075 1411 aa33.81■■■■□ 3
SERF1A-201ENST00000317633 KCNH8Q96L42 1107 aa33.8■■■■□ 3
SERF1A-201ENST00000317633 P3H3Q8IVL6 736 aa33.78■■■■□ 3
SERF1A-201ENST00000317633 CD109Q6YHK3 1445 aa33.78■■■■□ 3
SERF1A-201ENST00000317633 MAGI3Q5TCQ9 1506 aa33.75■■■□□ 2.99
SERF1A-201ENST00000317633 SAMD9Q5K651 1589 aa33.74■■■□□ 2.99
SERF1A-201ENST00000317633 ATP10BO94823 1461 aa33.67■■■□□ 2.98
SERF1A-201ENST00000317633 ADGRL1O94910 1474 aa33.65■■■□□ 2.98
SERF1A-201ENST00000317633 ARID3CA6NKF2 412 aa33.65■■■□□ 2.98
SERF1A-201ENST00000317633 RAPGEF6Q8TEU7 1601 aa33.63■■■□□ 2.97
SERF1A-201ENST00000317633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.54■■■□□ 2.96
SERF1A-201ENST00000317633 RANGAP1P46060 587 aaPredicted RBP33.54■■■□□ 2.96
SERF1A-201ENST00000317633 HNRNPUL2Q1KMD3 747 aaKnown RBP33.54■■■□□ 2.96
SERF1A-201ENST00000317633 ABCA9Q8IUA7 1624 aa33.53■■■□□ 2.96
SERF1A-201ENST00000317633 KIF21BO75037 1637 aa33.51■■■□□ 2.96
SERF1A-201ENST00000317633 ARAP3Q8WWN8 1544 aa33.49■■■□□ 2.95
SERF1A-201ENST00000317633 FHOD3Q2V2M9 1422 aa33.48■■■□□ 2.95
SERF1A-201ENST00000317633 PHLDB1Q86UU1 1377 aa33.47■■■□□ 2.95
SERF1A-201ENST00000317633 NUP153P49790 1475 aaKnown RBP33.46■■■□□ 2.95
SERF1A-201ENST00000317633 EFCAB5A4FU69 1503 aa33.44■■■□□ 2.94
SERF1A-201ENST00000317633 NEO1Q92859 1461 aa33.37■■■□□ 2.93
SERF1A-201ENST00000317633 PLEKHD1A6NEE1 506 aa33.37■■■□□ 2.93
SERF1A-201ENST00000317633 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
SERF1A-201ENST00000317633 RAPGEF3O95398 923 aa33.25■■■□□ 2.91
SERF1A-201ENST00000317633 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
SERF1A-201ENST00000317633 EHMT2Q96KQ7 1210 aa33.2■■■□□ 2.91
SERF1A-201ENST00000317633 CFAP74Q9C0B2 1584 aa33.18■■■□□ 2.9
SERF1A-201ENST00000317633 HECW2Q9P2P5 1572 aa33.18■■■□□ 2.9
SERF1A-201ENST00000317633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.18■■■□□ 2.9
SERF1A-201ENST00000317633 FMN1Q68DA7 1419 aa33.16■■■□□ 2.9
SERF1A-201ENST00000317633 FRMPD1Q5SYB0 1578 aa33.15■■■□□ 2.9
SERF1A-201ENST00000317633 FANCAO15360 1455 aa33.13■■■□□ 2.89
SERF1A-201ENST00000317633 AKNAQ7Z591 1439 aa33.13■■■□□ 2.89
SERF1A-201ENST00000317633 CDK13Q14004 1512 aaKnown RBP33.12■■■□□ 2.89
SERF1A-201ENST00000317633 DENND4BO75064 1496 aaPredicted RBP33.12■■■□□ 2.89
SERF1A-201ENST00000317633 HECW1Q76N89 1606 aa33.11■■■□□ 2.89
SERF1A-201ENST00000317633 TTC37Q6PGP7 1564 aa33.11■■■□□ 2.89
SERF1A-201ENST00000317633 ATP1B4Q9UN42 357 aaPredicted RBP33.09■■■□□ 2.89
SERF1A-201ENST00000317633 ARHGAP35Q9NRY4 1499 aa33.09■■■□□ 2.89
SERF1A-201ENST00000317633 RICTORQ6R327 1708 aa33.08■■■□□ 2.89
SERF1A-201ENST00000317633 ADAMTSL3P82987 1691 aa33.08■■■□□ 2.89
SERF1A-201ENST00000317633 ARID4BQ4LE39 1312 aaPredicted RBP33.05■■■□□ 2.88
SERF1A-201ENST00000317633 CDK11AQ9UQ88 783 aaPredicted RBP33.05■■■□□ 2.88
SERF1A-201ENST00000317633 BCORL1Q5H9F3 1711 aa33.02■■■□□ 2.88
SERF1A-201ENST00000317633 ARHGEF40Q8TER5 1519 aa33.02■■■□□ 2.88
SERF1A-201ENST00000317633 PTPRMP28827 1452 aa32.99■■■□□ 2.87
SERF1A-201ENST00000317633 PLCH2O75038 1416 aa32.99■■■□□ 2.87
SERF1A-201ENST00000317633 ZMYM4Q5VZL5 1548 aa32.97■■■□□ 2.87
SERF1A-201ENST00000317633 MYO5CQ9NQX4 1742 aa32.94■■■□□ 2.86
SERF1A-201ENST00000317633 MAGI2Q86UL8 1455 aa32.93■■■□□ 2.86
SERF1A-201ENST00000317633 MADDQ8WXG6 1647 aa32.92■■■□□ 2.86
SERF1A-201ENST00000317633 ZFYVE16Q7Z3T8 1539 aa32.91■■■□□ 2.86
SERF1A-201ENST00000317633 SCAPERQ9BY12 1400 aa32.9■■■□□ 2.86
SERF1A-201ENST00000317633 KIF14Q15058 1648 aa32.89■■■□□ 2.86
SERF1A-201ENST00000317633 EFCAB2Q5VUJ9 269 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms