RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 TOPBP1Q92547 1522 aa15.21■□□□□ 0.03
HNF4A-201ENST00000316099 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.02
HNF4A-201ENST00000316099 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
HNF4A-201ENST00000316099 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
HNF4A-201ENST00000316099 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
HNF4A-201ENST00000316099 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
HNF4A-201ENST00000316099 KANK4Q5T7N3 995 aaPredicted RBP15.18■□□□□ 0.02
HNF4A-201ENST00000316099 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
HNF4A-201ENST00000316099 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
HNF4A-201ENST00000316099 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
HNF4A-201ENST00000316099 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
HNF4A-201ENST00000316099 POLA1P09884 1462 aaPredicted RBP15.16■□□□□ 0.02
HNF4A-201ENST00000316099 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
HNF4A-201ENST00000316099 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
HNF4A-201ENST00000316099 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
HNF4A-201ENST00000316099 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
HNF4A-201ENST00000316099 ZNF777Q9ULD5 760 aaPredicted RBP15.11■□□□□ 0.01
HNF4A-201ENST00000316099 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
HNF4A-201ENST00000316099 MRC2Q9UBG0 1479 aa15.08■□□□□ 0.01
HNF4A-201ENST00000316099 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 02e-7■■■■□ 26.1
HNF4A-201ENST00000316099 CCNB3Q8WWL7 1395 aa15.06■□□□□ 0
HNF4A-201ENST00000316099 CHIC2Q9UKJ5 165 aa15.05■□□□□ 0
HNF4A-201ENST00000316099 FMN1Q68DA7 1419 aa15.05■□□□□ -0
HNF4A-201ENST00000316099 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
HNF4A-201ENST00000316099 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
HNF4A-201ENST00000316099 ABCA10Q8WWZ4 1543 aa15.04■□□□□ -0
HNF4A-201ENST00000316099 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
HNF4A-201ENST00000316099 ARAP1Q96P48 1450 aa15.03■□□□□ -0
HNF4A-201ENST00000316099 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
HNF4A-201ENST00000316099 BCANQ96GW7 911 aa15□□□□□ -0.01
HNF4A-201ENST00000316099 ANP32CO43423 234 aa14.97□□□□□ -0.01
HNF4A-201ENST00000316099 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.02
HNF4A-201ENST00000316099 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
HNF4A-201ENST00000316099 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
HNF4A-201ENST00000316099 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
HNF4A-201ENST00000316099 CUL7Q14999 1698 aa14.95□□□□□ -0.02
HNF4A-201ENST00000316099 PLEKHD1A6NEE1 506 aa14.93□□□□□ -0.02
HNF4A-201ENST00000316099 CARMIL2Q6F5E8 1435 aa14.91□□□□□ -0.02
HNF4A-201ENST00000316099 ZNF326Q5BKZ1 582 aaKnown RBP14.88□□□□□ -0.03
HNF4A-201ENST00000316099 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
HNF4A-201ENST00000316099 CFDP1Q9UEE9 299 aaPredicted RBP14.87□□□□□ -0.03
HNF4A-201ENST00000316099 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
HNF4A-201ENST00000316099 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
HNF4A-201ENST00000316099 SNAPC4Q5SXM2 1469 aa14.86□□□□□ -0.03
HNF4A-201ENST00000316099 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
HNF4A-201ENST00000316099 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
HNF4A-201ENST00000316099 SETD5Q9C0A6 1442 aa14.85□□□□□ -0.03
HNF4A-201ENST00000316099 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
HNF4A-201ENST00000316099 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
HNF4A-201ENST00000316099 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
HNF4A-201ENST00000316099 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
HNF4A-201ENST00000316099 TSPY4P0CV99 314 aa14.81□□□□□ -0.04
HNF4A-201ENST00000316099 TSPY10P0CW01 314 aa14.81□□□□□ -0.04
HNF4A-201ENST00000316099 ANP32AP39687 249 aaKnown RBP14.81□□□□□ -0.04
HNF4A-201ENST00000316099 TIAM1Q13009 1591 aa14.8□□□□□ -0.04
HNF4A-201ENST00000316099 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
HNF4A-201ENST00000316099 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
HNF4A-201ENST00000316099 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
HNF4A-201ENST00000316099 PHLDB1Q86UU1 1377 aa14.78□□□□□ -0.04
HNF4A-201ENST00000316099 SIN3AQ96ST3 1273 aa14.78□□□□□ -0.04
HNF4A-201ENST00000316099 CTTNBP2Q8WZ74 1663 aa14.77□□□□□ -0.05
HNF4A-201ENST00000316099 CCDC18Q5T9S5 1454 aa14.76□□□□□ -0.05
HNF4A-201ENST00000316099 IQGAP2Q13576 1575 aa14.75□□□□□ -0.05
HNF4A-201ENST00000316099 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
HNF4A-201ENST00000316099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.051e-8■□□□□ 10
HNF4A-201ENST00000316099 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
HNF4A-201ENST00000316099 DHX57Q6P158 1386 aaKnown RBP14.71□□□□□ -0.05
HNF4A-201ENST00000316099 PBRM1Q86U86 1689 aa14.7□□□□□ -0.06
HNF4A-201ENST00000316099 FGD6Q6ZV73 1430 aa14.69□□□□□ -0.06
HNF4A-201ENST00000316099 NCOA2Q15596 1464 aa14.69□□□□□ -0.06
HNF4A-201ENST00000316099 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
HNF4A-201ENST00000316099 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
HNF4A-201ENST00000316099 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
HNF4A-201ENST00000316099 GRIN2AQ12879 1464 aa14.68□□□□□ -0.06
HNF4A-201ENST00000316099 KIAA0586Q9BVV6 1533 aa14.68□□□□□ -0.06
HNF4A-201ENST00000316099 FKBP8Q14318 412 aa14.68□□□□□ -0.06
HNF4A-201ENST00000316099 PTPRGP23470 1445 aa14.68□□□□□ -0.06
HNF4A-201ENST00000316099 WDR62O43379 1518 aa14.67□□□□□ -0.06
HNF4A-201ENST00000316099 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
HNF4A-201ENST00000316099 MYOM3Q5VTT5 1437 aa14.67□□□□□ -0.06
HNF4A-201ENST00000316099 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
HNF4A-201ENST00000316099 DDX10Q13206 875 aaKnown RBP14.65□□□□□ -0.06
HNF4A-201ENST00000316099 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
HNF4A-201ENST00000316099 EHBP1L1Q8N3D4 1523 aa14.65□□□□□ -0.06
HNF4A-201ENST00000316099 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
HNF4A-201ENST00000316099 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
HNF4A-201ENST00000316099 MIER1Q8N108 512 aa14.63□□□□□ -0.07
HNF4A-201ENST00000316099 SENP3Q9H4L4 574 aaPredicted RBP14.63□□□□□ -0.07
HNF4A-201ENST00000316099 SUPT6HQ7KZ85 1726 aaKnown RBP14.63□□□□□ -0.07
HNF4A-201ENST00000316099 CDK13Q14004 1512 aaKnown RBP14.62□□□□□ -0.07
HNF4A-201ENST00000316099 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
HNF4A-201ENST00000316099 PRG4Q92954 1404 aaPredicted RBP14.62□□□□□ -0.07
HNF4A-201ENST00000316099 EPRSP07814 1512 aaKnown RBP14.6□□□□□ -0.07
HNF4A-201ENST00000316099 FOXD1Q16676 465 aa14.6□□□□□ -0.07
HNF4A-201ENST00000316099 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
HNF4A-201ENST00000316099 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.07
HNF4A-201ENST00000316099 GLIPR1L2Q4G1C9 344 aa14.58□□□□□ -0.08
HNF4A-201ENST00000316099 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
HNF4A-201ENST00000316099 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
HNF4A-201ENST00000316099 MPHOSPH9Q99550 1183 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms