RNA–Protein interactions for RNA: ENST00000314124.11

TMEM40-202, Transcript of transmembrane protein 40, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TMEM40, Length 2,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-202ENST00000314124 DDX10Q13206 875 aaKnown RBP22.36■■□□□ 1.17
TMEM40-202ENST00000314124 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
TMEM40-202ENST00000314124 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
TMEM40-202ENST00000314124 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
TMEM40-202ENST00000314124 RBM19Q9Y4C8 960 aaKnown RBP22.3■■□□□ 1.16
TMEM40-202ENST00000314124 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
TMEM40-202ENST00000314124 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
TMEM40-202ENST00000314124 ANP32CO43423 234 aa22.26■■□□□ 1.15
TMEM40-202ENST00000314124 CFAP43Q8NDM7 1665 aa22.24■■□□□ 1.15
TMEM40-202ENST00000314124 SIN3AQ96ST3 1273 aa22.23■■□□□ 1.15
TMEM40-202ENST00000314124 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
TMEM40-202ENST00000314124 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
TMEM40-202ENST00000314124 PHLDB1Q86UU1 1377 aa22.21■■□□□ 1.15
TMEM40-202ENST00000314124 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
TMEM40-202ENST00000314124 CFTRP13569 1480 aa22.19■■□□□ 1.14
TMEM40-202ENST00000314124 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
TMEM40-202ENST00000314124 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
TMEM40-202ENST00000314124 IGF1RP08069 1367 aa22.15■■□□□ 1.14
TMEM40-202ENST00000314124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.15■■□□□ 1.14
TMEM40-202ENST00000314124 PCF11O94913 1555 aaKnown RBP22.09■■□□□ 1.13
TMEM40-202ENST00000314124 CARMIL1Q5VZK9 1371 aa22.09■■□□□ 1.13
TMEM40-202ENST00000314124 FANCIQ9NVI1 1328 aa22.06■■□□□ 1.12
TMEM40-202ENST00000314124 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
TMEM40-202ENST00000314124 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
TMEM40-202ENST00000314124 FYCO1Q9BQS8 1478 aa22.02■■□□□ 1.12
TMEM40-202ENST00000314124 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
TMEM40-202ENST00000314124 ERICH6BQ5W0A0 696 aa21.98■■□□□ 1.11
TMEM40-202ENST00000314124 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.11
TMEM40-202ENST00000314124 EFCAB5A4FU69 1503 aa21.98■■□□□ 1.11
TMEM40-202ENST00000314124 MSH5O43196 834 aa21.97■■□□□ 1.11
TMEM40-202ENST00000314124 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
TMEM40-202ENST00000314124 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
TMEM40-202ENST00000314124 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
TMEM40-202ENST00000314124 CASKIN1Q8WXD9 1431 aa21.95■■□□□ 1.1
TMEM40-202ENST00000314124 ERICH6Q7L0X2 663 aa21.93■■□□□ 1.1
TMEM40-202ENST00000314124 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
TMEM40-202ENST00000314124 HFM1A2PYH4 1435 aa21.92■■□□□ 1.1
TMEM40-202ENST00000314124 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
TMEM40-202ENST00000314124 MYT1LQ9UL68 1186 aa21.9■■□□□ 1.1
TMEM40-202ENST00000314124 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
TMEM40-202ENST00000314124 PTPN23Q9H3S7 1636 aa21.9■■□□□ 1.1
TMEM40-202ENST00000314124 FHOD3Q2V2M9 1422 aa21.87■■□□□ 1.09
TMEM40-202ENST00000314124 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
TMEM40-202ENST00000314124 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
TMEM40-202ENST00000314124 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.09
TMEM40-202ENST00000314124 FMN1Q68DA7 1419 aa21.83■■□□□ 1.09
TMEM40-202ENST00000314124 KDM5BQ9UGL1 1544 aa21.81■■□□□ 1.08
TMEM40-202ENST00000314124 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
TMEM40-202ENST00000314124 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
TMEM40-202ENST00000314124 CUL7Q14999 1698 aa21.79■■□□□ 1.08
TMEM40-202ENST00000314124 NAIPQ13075 1403 aa21.79■■□□□ 1.08
TMEM40-202ENST00000314124 IRX6P78412 446 aaPredicted RBP21.77■■□□□ 1.08
TMEM40-202ENST00000314124 MTUS2Q5JR59 1369 aa21.77■■□□□ 1.08
TMEM40-202ENST00000314124 PTPRKQ15262 1439 aa21.77■■□□□ 1.07
TMEM40-202ENST00000314124 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
TMEM40-202ENST00000314124 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
TMEM40-202ENST00000314124 WASHC2AQ641Q2 1341 aa21.74■■□□□ 1.07
TMEM40-202ENST00000314124 CNTLNQ9NXG0 1405 aa21.73■■□□□ 1.07
TMEM40-202ENST00000314124 SUPT6HQ7KZ85 1726 aaKnown RBP21.73■■□□□ 1.07
TMEM40-202ENST00000314124 MYOM3Q5VTT5 1437 aa21.73■■□□□ 1.07
TMEM40-202ENST00000314124 HSPA5P11021 654 aaKnown RBP21.71■■□□□ 1.07
TMEM40-202ENST00000314124 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
TMEM40-202ENST00000314124 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
TMEM40-202ENST00000314124 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
TMEM40-202ENST00000314124 EIF4G2P78344 907 aaKnown RBP eCLIP21.69■■□□□ 1.06
TMEM40-202ENST00000314124 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
TMEM40-202ENST00000314124 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
TMEM40-202ENST00000314124 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
TMEM40-202ENST00000314124 EHBP1L1Q8N3D4 1523 aa21.66■■□□□ 1.06
TMEM40-202ENST00000314124 ZBED9Q6R2W3 1325 aa21.66■■□□□ 1.06
TMEM40-202ENST00000314124 SAMD9Q5K651 1589 aa21.64■■□□□ 1.06
TMEM40-202ENST00000314124 POLR1AO95602 1720 aaPredicted RBP21.62■■□□□ 1.05
TMEM40-202ENST00000314124 PRKRIP1Q9H875 184 aaPredicted RBP21.61■■□□□ 1.05
TMEM40-202ENST00000314124 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
TMEM40-202ENST00000314124 AKNAQ7Z591 1439 aa21.61■■□□□ 1.05
TMEM40-202ENST00000314124 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
TMEM40-202ENST00000314124 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
TMEM40-202ENST00000314124 UGGT2Q9NYU1 1516 aa21.59■■□□□ 1.05
TMEM40-202ENST00000314124 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
TMEM40-202ENST00000314124 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
TMEM40-202ENST00000314124 CCDC7Q96M83 1385 aa21.58■■□□□ 1.05
TMEM40-202ENST00000314124 MRS2Q9HD23 443 aa21.57■■□□□ 1.04
TMEM40-202ENST00000314124 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
TMEM40-202ENST00000314124 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
TMEM40-202ENST00000314124 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
TMEM40-202ENST00000314124 B4GALNT3Q6L9W6 998 aa21.57■■□□□ 1.04
TMEM40-202ENST00000314124 FAM9BQ8IZU0 186 aa21.56■■□□□ 1.04
TMEM40-202ENST00000314124 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
TMEM40-202ENST00000314124 DEKP35659 375 aaKnown RBP21.55■■□□□ 1.04
TMEM40-202ENST00000314124 DENND4BO75064 1496 aaPredicted RBP21.55■■□□□ 1.04
TMEM40-202ENST00000314124 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
TMEM40-202ENST00000314124 ABCA5Q8WWZ7 1642 aa21.54■■□□□ 1.04
TMEM40-202ENST00000314124 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
TMEM40-202ENST00000314124 RRP7BPQ9NSQ0 103 aa21.5■■□□□ 1.03
TMEM40-202ENST00000314124 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
TMEM40-202ENST00000314124 SMG6Q86US8 1419 aaKnown RBP21.48■■□□□ 1.03
TMEM40-202ENST00000314124 MPHOSPH9Q99550 1183 aa21.47■■□□□ 1.03
TMEM40-202ENST00000314124 C11orf95C9JLR9 678 aaPredicted RBP21.46■■□□□ 1.03
TMEM40-202ENST00000314124 KDM6BO15054 1643 aa21.45■■□□□ 1.02
TMEM40-202ENST00000314124 MIA2Q96PC5 1412 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms