RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
MKS1-201ENST00000313863 TIMELESSQ9UNS1 1208 aa19.85■□□□□ 0.77
MKS1-201ENST00000313863 ITGAEP38570 1179 aa19.84■□□□□ 0.77
MKS1-201ENST00000313863 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
MKS1-201ENST00000313863 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
MKS1-201ENST00000313863 PCF11O94913 1555 aaKnown RBP19.78■□□□□ 0.76
MKS1-201ENST00000313863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
MKS1-201ENST00000313863 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.75
MKS1-201ENST00000313863 FYCO1Q9BQS8 1478 aa19.76■□□□□ 0.75
MKS1-201ENST00000313863 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.752e-8■■■■■ 48
MKS1-201ENST00000313863 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
MKS1-201ENST00000313863 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
MKS1-201ENST00000313863 CUL7Q14999 1698 aa19.71■□□□□ 0.75
MKS1-201ENST00000313863 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
MKS1-201ENST00000313863 FAM50AQ14320 339 aaKnown RBP19.71■□□□□ 0.75
MKS1-201ENST00000313863 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
MKS1-201ENST00000313863 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
MKS1-201ENST00000313863 CASKIN1Q8WXD9 1431 aa19.69■□□□□ 0.74
MKS1-201ENST00000313863 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
MKS1-201ENST00000313863 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
MKS1-201ENST00000313863 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
MKS1-201ENST00000313863 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
MKS1-201ENST00000313863 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
MKS1-201ENST00000313863 TSHZ2Q9NRE2 1034 aa19.61■□□□□ 0.73
MKS1-201ENST00000313863 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
MKS1-201ENST00000313863 FHOD3Q2V2M9 1422 aa19.6■□□□□ 0.73
MKS1-201ENST00000313863 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
MKS1-201ENST00000313863 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
MKS1-201ENST00000313863 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
MKS1-201ENST00000313863 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
MKS1-201ENST00000313863 ANP32CO43423 234 aa19.56■□□□□ 0.72
MKS1-201ENST00000313863 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
MKS1-201ENST00000313863 NEFLP07196 543 aa19.55■□□□□ 0.72
MKS1-201ENST00000313863 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
MKS1-201ENST00000313863 TONSLQ96HA7 1378 aa19.54■□□□□ 0.72
MKS1-201ENST00000313863 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
MKS1-201ENST00000313863 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
MKS1-201ENST00000313863 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
MKS1-201ENST00000313863 HFM1A2PYH4 1435 aa19.52■□□□□ 0.72
MKS1-201ENST00000313863 UACAQ9BZF9 1416 aa19.52■□□□□ 0.71
MKS1-201ENST00000313863 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
MKS1-201ENST00000313863 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
MKS1-201ENST00000313863 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
MKS1-201ENST00000313863 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
MKS1-201ENST00000313863 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
MKS1-201ENST00000313863 FKBP8Q14318 412 aa19.48■□□□□ 0.71
MKS1-201ENST00000313863 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
MKS1-201ENST00000313863 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
MKS1-201ENST00000313863 EHBP1L1Q8N3D4 1523 aa19.44■□□□□ 0.7
MKS1-201ENST00000313863 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
MKS1-201ENST00000313863 ANP32EQ9BTT0 268 aa19.44■□□□□ 0.7
MKS1-201ENST00000313863 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
MKS1-201ENST00000313863 LRRIQ1Q96JM4 1722 aa19.42■□□□□ 0.7
MKS1-201ENST00000313863 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
MKS1-201ENST00000313863 NCOA2Q15596 1464 aa19.41■□□□□ 0.7
MKS1-201ENST00000313863 NAIPQ13075 1403 aa19.4■□□□□ 0.7
MKS1-201ENST00000313863 BCANQ96GW7 911 aa19.38■□□□□ 0.69
MKS1-201ENST00000313863 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
MKS1-201ENST00000313863 GCC2Q8IWJ2 1684 aa19.37■□□□□ 0.69
MKS1-201ENST00000313863 NESP48681 1621 aa19.37■□□□□ 0.69
MKS1-201ENST00000313863 PTPRKQ15262 1439 aa19.36■□□□□ 0.69
MKS1-201ENST00000313863 HECW1Q76N89 1606 aa19.35■□□□□ 0.69
MKS1-201ENST00000313863 UGGT2Q9NYU1 1516 aa19.35■□□□□ 0.69
MKS1-201ENST00000313863 GAPVD1Q14C86 1478 aa19.34■□□□□ 0.69
MKS1-201ENST00000313863 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
MKS1-201ENST00000313863 ARHGEF11O15085 1522 aa19.33■□□□□ 0.69
MKS1-201ENST00000313863 AKNAQ7Z591 1439 aa19.33■□□□□ 0.69
MKS1-201ENST00000313863 TRIM52Q96A61 297 aa19.32■□□□□ 0.68
MKS1-201ENST00000313863 TCOF1Q13428 1488 aaKnown RBP19.32■□□□□ 0.68
MKS1-201ENST00000313863 KDM5BQ9UGL1 1544 aa19.3■□□□□ 0.68
MKS1-201ENST00000313863 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
MKS1-201ENST00000313863 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
MKS1-201ENST00000313863 ERICH6BQ5W0A0 696 aa19.23■□□□□ 0.67
MKS1-201ENST00000313863 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
MKS1-201ENST00000313863 MIA2Q96PC5 1412 aa19.23■□□□□ 0.67
MKS1-201ENST00000313863 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
MKS1-201ENST00000313863 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
MKS1-201ENST00000313863 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
MKS1-201ENST00000313863 HNRNPUQ00839 825 aaKnown RBP eCLIP19.18■□□□□ 0.66
MKS1-201ENST00000313863 CNTLNQ9NXG0 1405 aa19.18■□□□□ 0.66
MKS1-201ENST00000313863 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
MKS1-201ENST00000313863 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
MKS1-201ENST00000313863 IQGAP2Q13576 1575 aa19.16■□□□□ 0.66
MKS1-201ENST00000313863 POLR1AO95602 1720 aaPredicted RBP19.15■□□□□ 0.66
MKS1-201ENST00000313863 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
MKS1-201ENST00000313863 WASHC2AQ641Q2 1341 aa19.15■□□□□ 0.66
MKS1-201ENST00000313863 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.65
MKS1-201ENST00000313863 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
MKS1-201ENST00000313863 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
MKS1-201ENST00000313863 WDR62O43379 1518 aa19.11■□□□□ 0.65
MKS1-201ENST00000313863 ROCK1Q13464 1354 aa19.1■□□□□ 0.65
MKS1-201ENST00000313863 MPHOSPH9Q99550 1183 aa19.1■□□□□ 0.65
MKS1-201ENST00000313863 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
MKS1-201ENST00000313863 KDM6BO15054 1643 aa19.1■□□□□ 0.65
MKS1-201ENST00000313863 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
MKS1-201ENST00000313863 BCL11AQ9H165 835 aa19.09■□□□□ 0.65
MKS1-201ENST00000313863 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
MKS1-201ENST00000313863 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
MKS1-201ENST00000313863 CCDC7Q96M83 1385 aa19.07■□□□□ 0.64
MKS1-201ENST00000313863 DNMT1P26358 1616 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms