RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
RAB6A-201ENST00000310653 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
RAB6A-201ENST00000310653 GTF3C3Q9Y5Q9 886 aa19.22■□□□□ 0.67
RAB6A-201ENST00000310653 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
RAB6A-201ENST00000310653 CHIC2Q9UKJ5 165 aa19.2■□□□□ 0.66
RAB6A-201ENST00000310653 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
RAB6A-201ENST00000310653 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
RAB6A-201ENST00000310653 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
RAB6A-201ENST00000310653 RAB3GAP2Q9H2M9 1393 aa19.14■□□□□ 0.66
RAB6A-201ENST00000310653 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
RAB6A-201ENST00000310653 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
RAB6A-201ENST00000310653 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
RAB6A-201ENST00000310653 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
RAB6A-201ENST00000310653 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
RAB6A-201ENST00000310653 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
RAB6A-201ENST00000310653 GAPVD1Q14C86 1478 aa19.04■□□□□ 0.64
RAB6A-201ENST00000310653 LRRC9Q6ZRR7 1453 aa19.04■□□□□ 0.64
RAB6A-201ENST00000310653 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
RAB6A-201ENST00000310653 PCF11O94913 1555 aaKnown RBP19.03■□□□□ 0.64
RAB6A-201ENST00000310653 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
RAB6A-201ENST00000310653 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
RAB6A-201ENST00000310653 PRDM2Q13029 1718 aa19■□□□□ 0.63
RAB6A-201ENST00000310653 TIAM1Q13009 1591 aa18.99■□□□□ 0.63
RAB6A-201ENST00000310653 FOXD1Q16676 465 aa18.99■□□□□ 0.63
RAB6A-201ENST00000310653 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
RAB6A-201ENST00000310653 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
RAB6A-201ENST00000310653 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
RAB6A-201ENST00000310653 TRIM52Q96A61 297 aa18.95■□□□□ 0.62
RAB6A-201ENST00000310653 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
RAB6A-201ENST00000310653 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
RAB6A-201ENST00000310653 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
RAB6A-201ENST00000310653 ZNF777Q9ULD5 760 aaPredicted RBP18.91■□□□□ 0.62
RAB6A-201ENST00000310653 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
RAB6A-201ENST00000310653 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
RAB6A-201ENST00000310653 PTPRKQ15262 1439 aa18.87■□□□□ 0.61
RAB6A-201ENST00000310653 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
RAB6A-201ENST00000310653 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
RAB6A-201ENST00000310653 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.6
RAB6A-201ENST00000310653 MAPKBP1O60336 1514 aa18.81■□□□□ 0.6
RAB6A-201ENST00000310653 FMN1Q68DA7 1419 aa18.8■□□□□ 0.6
RAB6A-201ENST00000310653 CDK13Q14004 1512 aaKnown RBP18.8■□□□□ 0.6
RAB6A-201ENST00000310653 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
RAB6A-201ENST00000310653 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
RAB6A-201ENST00000310653 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
RAB6A-201ENST00000310653 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
RAB6A-201ENST00000310653 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
RAB6A-201ENST00000310653 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
RAB6A-201ENST00000310653 SENP3-EIF4A1A0A087X0R7 540 aa18.73■□□□□ 0.59
RAB6A-201ENST00000310653 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
RAB6A-201ENST00000310653 ZNF326Q5BKZ1 582 aaKnown RBP18.72■□□□□ 0.59
RAB6A-201ENST00000310653 MAGI3Q5TCQ9 1506 aa18.72■□□□□ 0.59
RAB6A-201ENST00000310653 CUL7Q14999 1698 aa18.71■□□□□ 0.59
RAB6A-201ENST00000310653 CTTNBP2Q8WZ74 1663 aa18.71■□□□□ 0.59
RAB6A-201ENST00000310653 BCANQ96GW7 911 aa18.7■□□□□ 0.58
RAB6A-201ENST00000310653 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
RAB6A-201ENST00000310653 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
RAB6A-201ENST00000310653 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
RAB6A-201ENST00000310653 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
RAB6A-201ENST00000310653 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
RAB6A-201ENST00000310653 LRRIQ1Q96JM4 1722 aa18.67■□□□□ 0.58
RAB6A-201ENST00000310653 CCDC18Q5T9S5 1454 aa18.66■□□□□ 0.58
RAB6A-201ENST00000310653 EFCAB5A4FU69 1503 aa18.65■□□□□ 0.58
RAB6A-201ENST00000310653 MYOM3Q5VTT5 1437 aa18.64■□□□□ 0.57
RAB6A-201ENST00000310653 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
RAB6A-201ENST00000310653 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
RAB6A-201ENST00000310653 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
RAB6A-201ENST00000310653 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
RAB6A-201ENST00000310653 NAIPQ13075 1403 aa18.6■□□□□ 0.57
RAB6A-201ENST00000310653 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
RAB6A-201ENST00000310653 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
RAB6A-201ENST00000310653 EPRSP07814 1512 aaKnown RBP18.59■□□□□ 0.57
RAB6A-201ENST00000310653 PLB1Q6P1J6 1458 aa18.59■□□□□ 0.57
RAB6A-201ENST00000310653 CFDP1Q9UEE9 299 aaPredicted RBP18.59■□□□□ 0.57
RAB6A-201ENST00000310653 MPHOSPH9Q99550 1183 aa18.58■□□□□ 0.56
RAB6A-201ENST00000310653 IQGAP2Q13576 1575 aa18.58■□□□□ 0.56
RAB6A-201ENST00000310653 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
RAB6A-201ENST00000310653 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
RAB6A-201ENST00000310653 SAMD9Q5K651 1589 aa18.55■□□□□ 0.56
RAB6A-201ENST00000310653 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
RAB6A-201ENST00000310653 KDM6BO15054 1643 aa18.53■□□□□ 0.56
RAB6A-201ENST00000310653 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
RAB6A-201ENST00000310653 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
RAB6A-201ENST00000310653 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.555e-8■■□□□ 12.5
RAB6A-201ENST00000310653 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
RAB6A-201ENST00000310653 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
RAB6A-201ENST00000310653 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
RAB6A-201ENST00000310653 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
RAB6A-201ENST00000310653 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
RAB6A-201ENST00000310653 DISP1Q96F81 1524 aa18.48■□□□□ 0.55
RAB6A-201ENST00000310653 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
RAB6A-201ENST00000310653 ANP32CO43423 234 aa18.47■□□□□ 0.55
RAB6A-201ENST00000310653 C11orf95C9JLR9 678 aaPredicted RBP18.47■□□□□ 0.55
RAB6A-201ENST00000310653 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
RAB6A-201ENST00000310653 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
RAB6A-201ENST00000310653 SUPT6HQ7KZ85 1726 aaKnown RBP18.46■□□□□ 0.55
RAB6A-201ENST00000310653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB6A-201ENST00000310653 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
RAB6A-201ENST00000310653 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
RAB6A-201ENST00000310653 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
RAB6A-201ENST00000310653 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms