RNA–Protein interactions for RNA: ENST00000308964.7

CCDC106-201, Transcript of coiled-coil domain containing 106, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC106, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC106-201ENST00000308964 RAPGEF2Q9Y4G8 1499 aa31.1■■■□□ 2.57
CCDC106-201ENST00000308964 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
CCDC106-201ENST00000308964 CSRNP3Q8WYN3 585 aa31.08■■■□□ 2.57
CCDC106-201ENST00000308964 ERCC6L2Q5T890 1561 aa31.06■■■□□ 2.56
CCDC106-201ENST00000308964 KIAA0586Q9BVV6 1533 aa31.04■■■□□ 2.56
CCDC106-201ENST00000308964 SHROOM2Q13796 1616 aa31.04■■■□□ 2.56
CCDC106-201ENST00000308964 PRXQ9BXM0 1461 aa31.02■■■□□ 2.56
CCDC106-201ENST00000308964 PRG4Q92954 1404 aaPredicted RBP31■■■□□ 2.55
CCDC106-201ENST00000308964 EEA1Q15075 1411 aa30.97■■■□□ 2.55
CCDC106-201ENST00000308964 IQGAP2Q13576 1575 aa30.85■■■□□ 2.53
CCDC106-201ENST00000308964 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
CCDC106-201ENST00000308964 LOC105371045A0A1W2PR82 267 aa30.75■■■□□ 2.51
CCDC106-201ENST00000308964 EHMT2Q96KQ7 1210 aa30.75■■■□□ 2.51
CCDC106-201ENST00000308964 CTTNBP2Q8WZ74 1663 aa30.74■■■□□ 2.51
CCDC106-201ENST00000308964 TTBK1Q5TCY1 1321 aaPredicted RBP30.72■■■□□ 2.51
CCDC106-201ENST00000308964 CARMIL2Q6F5E8 1435 aa30.7■■■□□ 2.51
CCDC106-201ENST00000308964 UGGT2Q9NYU1 1516 aa30.69■■■□□ 2.5
CCDC106-201ENST00000308964 DISP1Q96F81 1524 aa30.69■■■□□ 2.5
CCDC106-201ENST00000308964 KIF21BO75037 1637 aa30.65■■■□□ 2.5
CCDC106-201ENST00000308964 PTPRGP23470 1445 aa30.63■■■□□ 2.49
CCDC106-201ENST00000308964 TNIKQ9UKE5 1360 aa30.63■■■□□ 2.49
CCDC106-201ENST00000308964 RANGAP1P46060 587 aaPredicted RBP30.57■■■□□ 2.49
CCDC106-201ENST00000308964 UBTFP17480 764 aaKnown RBP30.57■■■□□ 2.48
CCDC106-201ENST00000308964 KIAA0556O60303 1618 aa30.56■■■□□ 2.48
CCDC106-201ENST00000308964 P3H3Q8IVL6 736 aa30.53■■■□□ 2.48
CCDC106-201ENST00000308964 GOLGA3Q08378 1498 aa30.51■■■□□ 2.47
CCDC106-201ENST00000308964 ADCY10Q96PN6 1610 aa30.48■■■□□ 2.47
CCDC106-201ENST00000308964 NPM1P06748 294 aaKnown RBP eCLIP30.46■■■□□ 2.47
CCDC106-201ENST00000308964 UACAQ9BZF9 1416 aa30.41■■■□□ 2.46
CCDC106-201ENST00000308964 SAMD9Q5K651 1589 aa30.37■■■□□ 2.45
CCDC106-201ENST00000308964 PLB1Q6P1J6 1458 aa30.34■■■□□ 2.45
CCDC106-201ENST00000308964 UHRF1BP1LA0JNW5 1464 aa30.32■■■□□ 2.44
CCDC106-201ENST00000308964 ABCC2Q92887 1545 aa30.3■■■□□ 2.44
CCDC106-201ENST00000308964 FHOD3Q2V2M9 1422 aa30.28■■■□□ 2.44
CCDC106-201ENST00000308964 ABCA8O94911 1581 aa30.24■■■□□ 2.43
CCDC106-201ENST00000308964 MAPKBP1O60336 1514 aa30.23■■■□□ 2.43
CCDC106-201ENST00000308964 EFCAB5A4FU69 1503 aa30.21■■■□□ 2.43
CCDC106-201ENST00000308964 KDM5BQ9UGL1 1544 aa30.2■■■□□ 2.43
CCDC106-201ENST00000308964 FAM69CQ0P6D2 419 aa30.2■■■□□ 2.42
CCDC106-201ENST00000308964 ARID3CA6NKF2 412 aa30.18■■■□□ 2.42
CCDC106-201ENST00000308964 ARHGAP35Q9NRY4 1499 aa30.18■■■□□ 2.42
CCDC106-201ENST00000308964 ASXL2Q76L83 1435 aa30.15■■■□□ 2.42
CCDC106-201ENST00000308964 ZCCHC11Q5TAX3 1644 aaKnown RBP30.14■■■□□ 2.42
CCDC106-201ENST00000308964 KIF13AQ9H1H9 1805 aa30.14■■■□□ 2.42
CCDC106-201ENST00000308964 ABCC10Q5T3U5 1492 aa30.14■■■□□ 2.41
CCDC106-201ENST00000308964 RAPGEF6Q8TEU7 1601 aa30.08■■■□□ 2.41
CCDC106-201ENST00000308964 ATP10BO94823 1461 aa30.06■■■□□ 2.4
CCDC106-201ENST00000308964 DIP2BQ9P265 1576 aa30.05■■■□□ 2.4
CCDC106-201ENST00000308964 NUP153P49790 1475 aaKnown RBP30.01■■■□□ 2.4
CCDC106-201ENST00000308964 CLIP1P30622 1438 aa30.01■■■□□ 2.39
CCDC106-201ENST00000308964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30■■■□□ 2.39
CCDC106-201ENST00000308964 HNRNPUL2Q1KMD3 747 aaKnown RBP30■■■□□ 2.39
CCDC106-201ENST00000308964 CEP162Q5TB80 1403 aa29.98■■■□□ 2.39
CCDC106-201ENST00000308964 FMN1Q68DA7 1419 aa29.98■■■□□ 2.39
CCDC106-201ENST00000308964 KCNH8Q96L42 1107 aa29.98■■■□□ 2.39
CCDC106-201ENST00000308964 ATP1B4Q9UN42 357 aaPredicted RBP29.97■■■□□ 2.39
CCDC106-201ENST00000308964 WDR7Q9Y4E6 1490 aa29.96■■■□□ 2.39
CCDC106-201ENST00000308964 EPRSP07814 1512 aaKnown RBP29.95■■■□□ 2.38
CCDC106-201ENST00000308964 TSPOAP1O95153 1857 aa29.89■■■□□ 2.38
CCDC106-201ENST00000308964 GLI2P10070 1586 aa29.88■■■□□ 2.37
CCDC106-201ENST00000308964 CDK13Q14004 1512 aaKnown RBP29.83■■■□□ 2.37
CCDC106-201ENST00000308964 PLEKHD1A6NEE1 506 aa29.82■■■□□ 2.36
CCDC106-201ENST00000308964 HECW1Q76N89 1606 aa29.8■■■□□ 2.36
CCDC106-201ENST00000308964 CASKIN1Q8WXD9 1431 aa29.78■■■□□ 2.36
CCDC106-201ENST00000308964 MAP3K4Q9Y6R4 1608 aa29.76■■■□□ 2.35
CCDC106-201ENST00000308964 PCF11O94913 1555 aaKnown RBP29.75■■■□□ 2.35
CCDC106-201ENST00000308964 PPRC1Q5VV67 1664 aaKnown RBP29.73■■■□□ 2.35
CCDC106-201ENST00000308964 LRRIQ1Q96JM4 1722 aa29.73■■■□□ 2.35
CCDC106-201ENST00000308964 CD109Q6YHK3 1445 aa29.73■■■□□ 2.35
CCDC106-201ENST00000308964 TRIM26Q12899 539 aaPredicted RBP29.71■■■□□ 2.35
CCDC106-201ENST00000308964 KDM6BO15054 1643 aa29.69■■■□□ 2.34
CCDC106-201ENST00000308964 FYCO1Q9BQS8 1478 aa29.67■■■□□ 2.34
CCDC106-201ENST00000308964 PCGF6Q9BYE7 350 aa29.66■■■□□ 2.34
CCDC106-201ENST00000308964 CDK11AQ9UQ88 783 aaPredicted RBP29.66■■■□□ 2.34
CCDC106-201ENST00000308964 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
CCDC106-201ENST00000308964 ABCA9Q8IUA7 1624 aa29.62■■■□□ 2.33
CCDC106-201ENST00000308964 MAGI3Q5TCQ9 1506 aa29.6■■■□□ 2.33
CCDC106-201ENST00000308964 TEX14Q8IWB6 1497 aa29.6■■■□□ 2.33
CCDC106-201ENST00000308964 CCDC18Q5T9S5 1454 aa29.59■■■□□ 2.33
CCDC106-201ENST00000308964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.57■■■□□ 2.32
CCDC106-201ENST00000308964 TROQ12816 1431 aaPredicted RBP29.56■■■□□ 2.32
CCDC106-201ENST00000308964 COL17A1Q9UMD9 1497 aaPredicted RBP29.55■■■□□ 2.32
CCDC106-201ENST00000308964 TTC37Q6PGP7 1564 aa29.52■■■□□ 2.32
CCDC106-201ENST00000308964 VPS8Q8N3P4 1428 aa29.5■■■□□ 2.31
CCDC106-201ENST00000308964 KIF14Q15058 1648 aa29.5■■■□□ 2.31
CCDC106-201ENST00000308964 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
CCDC106-201ENST00000308964 PLCH2O75038 1416 aa29.41■■■□□ 2.3
CCDC106-201ENST00000308964 MTUS2Q5JR59 1369 aa29.38■■■□□ 2.29
CCDC106-201ENST00000308964 NEO1Q92859 1461 aa29.38■■■□□ 2.29
CCDC106-201ENST00000308964 FANCAO15360 1455 aa29.37■■■□□ 2.29
CCDC106-201ENST00000308964 PHLDB1Q86UU1 1377 aa29.37■■■□□ 2.29
CCDC106-201ENST00000308964 RAPGEF3O95398 923 aa29.35■■■□□ 2.29
CCDC106-201ENST00000308964 ARAP3Q8WWN8 1544 aa29.35■■■□□ 2.29
CCDC106-201ENST00000308964 AKNAQ7Z591 1439 aa29.35■■■□□ 2.29
CCDC106-201ENST00000308964 MYO5CQ9NQX4 1742 aa29.33■■■□□ 2.29
CCDC106-201ENST00000308964 EFCAB2Q5VUJ9 269 aa29.32■■■□□ 2.28
CCDC106-201ENST00000308964 TIAM1Q13009 1591 aa29.29■■■□□ 2.28
CCDC106-201ENST00000308964 KANK4Q5T7N3 995 aaPredicted RBP29.27■■■□□ 2.28
CCDC106-201ENST00000308964 APLP2Q06481 763 aa29.26■■■□□ 2.27
CCDC106-201ENST00000308964 PPARGC1BQ86YN6 1023 aaKnown RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms