RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
TMEM87A-201ENST00000307216 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
TMEM87A-201ENST00000307216 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.02
TMEM87A-201ENST00000307216 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
TMEM87A-201ENST00000307216 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
TMEM87A-201ENST00000307216 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.01
TMEM87A-201ENST00000307216 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
TMEM87A-201ENST00000307216 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
TMEM87A-201ENST00000307216 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 18e-7■□□□□ 11.3
TMEM87A-201ENST00000307216 GAPVD1Q14C86 1478 aa21.33■■□□□ 1
TMEM87A-201ENST00000307216 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
TMEM87A-201ENST00000307216 FYCO1Q9BQS8 1478 aa21.29■■□□□ 1
TMEM87A-201ENST00000307216 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
TMEM87A-201ENST00000307216 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
TMEM87A-201ENST00000307216 KANK4Q5T7N3 995 aaPredicted RBP21.27■□□□□ 0.99
TMEM87A-201ENST00000307216 MRC2Q9UBG0 1479 aa21.27■□□□□ 0.99
TMEM87A-201ENST00000307216 PCF11O94913 1555 aaKnown RBP21.25■□□□□ 0.99
TMEM87A-201ENST00000307216 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
TMEM87A-201ENST00000307216 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
TMEM87A-201ENST00000307216 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
TMEM87A-201ENST00000307216 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
TMEM87A-201ENST00000307216 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
TMEM87A-201ENST00000307216 CASKIN1Q8WXD9 1431 aa21.22■□□□□ 0.99
TMEM87A-201ENST00000307216 THOC2Q8NI27 1593 aaKnown RBP21.18■□□□□ 0.98
TMEM87A-201ENST00000307216 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
TMEM87A-201ENST00000307216 WDR62O43379 1518 aa21.14■□□□□ 0.98
TMEM87A-201ENST00000307216 FHOD3Q2V2M9 1422 aa21.14■□□□□ 0.98
TMEM87A-201ENST00000307216 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
TMEM87A-201ENST00000307216 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
TMEM87A-201ENST00000307216 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
TMEM87A-201ENST00000307216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.97
TMEM87A-201ENST00000307216 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
TMEM87A-201ENST00000307216 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
TMEM87A-201ENST00000307216 DHX57Q6P158 1386 aaKnown RBP21.06■□□□□ 0.96
TMEM87A-201ENST00000307216 IQGAP2Q13576 1575 aa21.04■□□□□ 0.96
TMEM87A-201ENST00000307216 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
TMEM87A-201ENST00000307216 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
TMEM87A-201ENST00000307216 P3H3Q8IVL6 736 aa21■□□□□ 0.95
TMEM87A-201ENST00000307216 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
TMEM87A-201ENST00000307216 DIEXFQ68CQ4 756 aaKnown RBP20.98■□□□□ 0.95
TMEM87A-201ENST00000307216 EHBP1L1Q8N3D4 1523 aa20.97■□□□□ 0.95
TMEM87A-201ENST00000307216 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
TMEM87A-201ENST00000307216 SUPT6HQ7KZ85 1726 aaKnown RBP20.96■□□□□ 0.95
TMEM87A-201ENST00000307216 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
TMEM87A-201ENST00000307216 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
TMEM87A-201ENST00000307216 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.94
TMEM87A-201ENST00000307216 MTUS2Q5JR59 1369 aa20.92■□□□□ 0.94
TMEM87A-201ENST00000307216 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
TMEM87A-201ENST00000307216 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
TMEM87A-201ENST00000307216 EIF4G3O43432 1585 aaKnown RBP20.91■□□□□ 0.94
TMEM87A-201ENST00000307216 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
TMEM87A-201ENST00000307216 FGD6Q6ZV73 1430 aa20.89■□□□□ 0.93
TMEM87A-201ENST00000307216 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
TMEM87A-201ENST00000307216 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
TMEM87A-201ENST00000307216 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
TMEM87A-201ENST00000307216 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
TMEM87A-201ENST00000307216 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
TMEM87A-201ENST00000307216 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
TMEM87A-201ENST00000307216 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.93
TMEM87A-201ENST00000307216 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
TMEM87A-201ENST00000307216 ITGAEP38570 1179 aa20.8■□□□□ 0.92
TMEM87A-201ENST00000307216 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
TMEM87A-201ENST00000307216 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
TMEM87A-201ENST00000307216 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
TMEM87A-201ENST00000307216 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
TMEM87A-201ENST00000307216 PTPN23Q9H3S7 1636 aa20.76■□□□□ 0.91
TMEM87A-201ENST00000307216 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
TMEM87A-201ENST00000307216 TCOF1Q13428 1488 aaKnown RBP20.74■□□□□ 0.91
TMEM87A-201ENST00000307216 HFM1A2PYH4 1435 aa20.72■□□□□ 0.91
TMEM87A-201ENST00000307216 MIA2Q96PC5 1412 aa20.72■□□□□ 0.91
TMEM87A-201ENST00000307216 DISP1Q96F81 1524 aa20.71■□□□□ 0.91
TMEM87A-201ENST00000307216 RAPGEF6Q8TEU7 1601 aa20.71■□□□□ 0.91
TMEM87A-201ENST00000307216 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
TMEM87A-201ENST00000307216 MAGI3Q5TCQ9 1506 aa20.7■□□□□ 0.9
TMEM87A-201ENST00000307216 CENPBP07199 599 aaPredicted RBP20.69■□□□□ 0.9
TMEM87A-201ENST00000307216 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
TMEM87A-201ENST00000307216 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
TMEM87A-201ENST00000307216 NUP160Q12769 1436 aa20.64■□□□□ 0.9
TMEM87A-201ENST00000307216 CEP170Q5SW79 1584 aa20.64■□□□□ 0.9
TMEM87A-201ENST00000307216 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
TMEM87A-201ENST00000307216 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
TMEM87A-201ENST00000307216 CDK13Q14004 1512 aaKnown RBP20.62■□□□□ 0.89
TMEM87A-201ENST00000307216 CHMP7Q8WUX9 453 aaPredicted RBP20.61■□□□□ 0.89
TMEM87A-201ENST00000307216 CDK11AQ9UQ88 783 aaPredicted RBP20.61■□□□□ 0.89
TMEM87A-201ENST00000307216 NAIPQ13075 1403 aa20.59■□□□□ 0.89
TMEM87A-201ENST00000307216 NUP153P49790 1475 aaKnown RBP20.59■□□□□ 0.89
TMEM87A-201ENST00000307216 ITSN2Q9NZM3 1697 aa20.57■□□□□ 0.88
TMEM87A-201ENST00000307216 PTPRKQ15262 1439 aa20.56■□□□□ 0.88
TMEM87A-201ENST00000307216 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
TMEM87A-201ENST00000307216 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
TMEM87A-201ENST00000307216 TROQ12816 1431 aaPredicted RBP20.51■□□□□ 0.87
TMEM87A-201ENST00000307216 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
TMEM87A-201ENST00000307216 MIER1Q8N108 512 aa20.46■□□□□ 0.87
TMEM87A-201ENST00000307216 JPH4Q96JJ6 628 aa20.45■□□□□ 0.86
TMEM87A-201ENST00000307216 ABCA8O94911 1581 aa20.45■□□□□ 0.86
TMEM87A-201ENST00000307216 DAPK1P53355 1430 aa20.43■□□□□ 0.86
TMEM87A-201ENST00000307216 TONSLQ96HA7 1378 aa20.42■□□□□ 0.86
TMEM87A-201ENST00000307216 ADGBQ8N7X0 1667 aa20.41■□□□□ 0.86
TMEM87A-201ENST00000307216 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
TMEM87A-201ENST00000307216 FBLN2P98095 1184 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms