RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 OSCARQ8IYS5 282 aa44.27■■■■■ 4.68
HDAC3-201ENST00000305264 UBTFP17480 764 aaKnown RBP44.25■■■■■ 4.67
HDAC3-201ENST00000305264 CLASP1Q7Z460 1538 aa44.25■■■■■ 4.67
HDAC3-201ENST00000305264 KIAA0586Q9BVV6 1533 aa44.22■■■■■ 4.67
HDAC3-201ENST00000305264 IQGAP2Q13576 1575 aa44.17■■■■■ 4.66
HDAC3-201ENST00000305264 TNIKQ9UKE5 1360 aa44.07■■■■■ 4.65
HDAC3-201ENST00000305264 SHROOM2Q13796 1616 aa44.01■■■■■ 4.64
HDAC3-201ENST00000305264 JPH4Q96JJ6 628 aa43.93■■■■■ 4.62
HDAC3-201ENST00000305264 UGGT2Q9NYU1 1516 aa43.93■■■■■ 4.62
HDAC3-201ENST00000305264 RANGAP1P46060 587 aaPredicted RBP43.91■■■■■ 4.62
HDAC3-201ENST00000305264 PRG4Q92954 1404 aaPredicted RBP43.82■■■■■ 4.61
HDAC3-201ENST00000305264 ERCC6L2Q5T890 1561 aa43.79■■■■■ 4.6
HDAC3-201ENST00000305264 DISP1Q96F81 1524 aa43.79■■■■■ 4.6
HDAC3-201ENST00000305264 SAMD9Q5K651 1589 aa43.78■■■■■ 4.6
HDAC3-201ENST00000305264 CEP162Q5TB80 1403 aa43.78■■■■■ 4.6
HDAC3-201ENST00000305264 KIAA0556O60303 1618 aa43.75■■■■■ 4.59
HDAC3-201ENST00000305264 CLIP1P30622 1438 aa43.72■■■■■ 4.59
HDAC3-201ENST00000305264 EFCAB5A4FU69 1503 aa43.72■■■■■ 4.59
HDAC3-201ENST00000305264 ARHGAP35Q9NRY4 1499 aa43.69■■■■■ 4.59
HDAC3-201ENST00000305264 CARMIL2Q6F5E8 1435 aa43.68■■■■■ 4.58
HDAC3-201ENST00000305264 ARHGEF11O15085 1522 aa43.66■■■■■ 4.58
HDAC3-201ENST00000305264 P3H3Q8IVL6 736 aa43.62■■■■■ 4.57
HDAC3-201ENST00000305264 RIMBP3CA6NJZ7 1639 aa43.58■■■■■ 4.57
HDAC3-201ENST00000305264 RIMBP3BA6NNM3 1639 aa43.58■■■■■ 4.57
HDAC3-201ENST00000305264 RIMBP3Q9UFD9 1639 aa43.58■■■■■ 4.57
HDAC3-201ENST00000305264 FHOD3Q2V2M9 1422 aa43.58■■■■■ 4.57
HDAC3-201ENST00000305264 ARAP1Q96P48 1450 aa43.52■■■■■ 4.56
HDAC3-201ENST00000305264 DNAJC5Q9H3Z4 198 aa43.45■■■■■ 4.55
HDAC3-201ENST00000305264 TTBK1Q5TCY1 1321 aaPredicted RBP43.43■■■■■ 4.54
HDAC3-201ENST00000305264 PTPRGP23470 1445 aa43.38■■■■■ 4.54
HDAC3-201ENST00000305264 FMN1Q68DA7 1419 aa43.27■■■■■ 4.52
HDAC3-201ENST00000305264 PLB1Q6P1J6 1458 aa43.23■■■■■ 4.51
HDAC3-201ENST00000305264 ABCA8O94911 1581 aa43.19■■■■■ 4.5
HDAC3-201ENST00000305264 PCF11O94913 1555 aaKnown RBP43.17■■■■■ 4.5
HDAC3-201ENST00000305264 VPS8Q8N3P4 1428 aa43.17■■■■■ 4.5
HDAC3-201ENST00000305264 RAPGEF6Q8TEU7 1601 aa43.16■■■■■ 4.5
HDAC3-201ENST00000305264 CYB5RLQ6IPT4 315 aa43.15■■■■■ 4.5
HDAC3-201ENST00000305264 UACAQ9BZF9 1416 aa43.14■■■■■ 4.5
HDAC3-201ENST00000305264 ADCY10Q96PN6 1610 aa43.09■■■■■ 4.49
HDAC3-201ENST00000305264 ABCC2Q92887 1545 aa43.09■■■■■ 4.49
HDAC3-201ENST00000305264 CASKIN1Q8WXD9 1431 aa43.06■■■■■ 4.48
HDAC3-201ENST00000305264 FYCO1Q9BQS8 1478 aa43.04■■■■■ 4.48
HDAC3-201ENST00000305264 UHRF1BP1LA0JNW5 1464 aa43.03■■■■■ 4.48
HDAC3-201ENST00000305264 HECW1Q76N89 1606 aa43.02■■■■■ 4.48
HDAC3-201ENST00000305264 NUP153P49790 1475 aaKnown RBP43.01■■■■■ 4.48
HDAC3-201ENST00000305264 LRRIQ1Q96JM4 1722 aa42.96■■■■■ 4.47
HDAC3-201ENST00000305264 ATP1B4Q9UN42 357 aaPredicted RBP42.96■■■■■ 4.47
HDAC3-201ENST00000305264 ARID3CA6NKF2 412 aa42.9■■■■■ 4.46
HDAC3-201ENST00000305264 EPRSP07814 1512 aaKnown RBP42.86■■■■■ 4.45
HDAC3-201ENST00000305264 CDK13Q14004 1512 aaKnown RBP42.85■■■■■ 4.45
HDAC3-201ENST00000305264 KDM5BQ9UGL1 1544 aa42.85■■■■■ 4.45
HDAC3-201ENST00000305264 ZCCHC11Q5TAX3 1644 aaKnown RBP42.84■■■■■ 4.45
HDAC3-201ENST00000305264 ATP10BO94823 1461 aa42.82■■■■■ 4.44
HDAC3-201ENST00000305264 CCDC18Q5T9S5 1454 aa42.78■■■■■ 4.44
HDAC3-201ENST00000305264 CFAP43Q8NDM7 1665 aa42.73■■■■■ 4.43
HDAC3-201ENST00000305264 TIAM1Q13009 1591 aa42.69■■■■■ 4.42
HDAC3-201ENST00000305264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.69■■■■■ 4.42
HDAC3-201ENST00000305264 HNRNPUL2Q1KMD3 747 aaKnown RBP42.69■■■■■ 4.42
HDAC3-201ENST00000305264 NPM1P06748 294 aaKnown RBP eCLIP42.67■■■■■ 4.42
HDAC3-201ENST00000305264 MAP3K1Q13233 1512 aa42.62■■■■■ 4.41
HDAC3-201ENST00000305264 MAGI3Q5TCQ9 1506 aa42.58■■■■■ 4.41
HDAC3-201ENST00000305264 APLP2Q06481 763 aa42.58■■■■■ 4.41
HDAC3-201ENST00000305264 MAPKBP1O60336 1514 aa42.56■■■■■ 4.4
HDAC3-201ENST00000305264 ASXL2Q76L83 1435 aa42.55■■■■■ 4.4
HDAC3-201ENST00000305264 WDR7Q9Y4E6 1490 aa42.49■■■■■ 4.39
HDAC3-201ENST00000305264 CDK11AQ9UQ88 783 aaPredicted RBP42.48■■■■■ 4.39
HDAC3-201ENST00000305264 LRRC9Q6ZRR7 1453 aa42.47■■■■■ 4.39
HDAC3-201ENST00000305264 PLEKHD1A6NEE1 506 aa42.46■■■■■ 4.39
HDAC3-201ENST00000305264 KANK4Q5T7N3 995 aaPredicted RBP42.46■■■■■ 4.39
HDAC3-201ENST00000305264 TROQ12816 1431 aaPredicted RBP42.44■■■■■ 4.38
HDAC3-201ENST00000305264 MTUS2Q5JR59 1369 aa42.44■■■■■ 4.38
HDAC3-201ENST00000305264 EHBP1L1Q8N3D4 1523 aa42.43■■■■■ 4.38
HDAC3-201ENST00000305264 KIF14Q15058 1648 aa42.36■■■■■ 4.37
HDAC3-201ENST00000305264 PPARGC1BQ86YN6 1023 aaKnown RBP42.33■■■■■ 4.37
HDAC3-201ENST00000305264 KCNH8Q96L42 1107 aa42.31■■■■■ 4.36
HDAC3-201ENST00000305264 SUPT6HQ7KZ85 1726 aaKnown RBP42.27■■■■■ 4.36
HDAC3-201ENST00000305264 DIP2BQ9P265 1576 aa42.26■■■■■ 4.36
HDAC3-201ENST00000305264 ABCC10Q5T3U5 1492 aa42.23■■■■■ 4.35
HDAC3-201ENST00000305264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.21■■■■■ 4.35
HDAC3-201ENST00000305264 TTC37Q6PGP7 1564 aa42.21■■■■■ 4.35
HDAC3-201ENST00000305264 NCOA2Q15596 1464 aa42.19■■■■■ 4.34
HDAC3-201ENST00000305264 KIF13AQ9H1H9 1805 aa42.17■■■■■ 4.34
HDAC3-201ENST00000305264 ABCA9Q8IUA7 1624 aa42.17■■■■■ 4.34
HDAC3-201ENST00000305264 GLI2P10070 1586 aa42.14■■■■■ 4.34
HDAC3-201ENST00000305264 FAM69CQ0P6D2 419 aa42.08■■■■■ 4.33
HDAC3-201ENST00000305264 MAP3K4Q9Y6R4 1608 aa42.05■■■■■ 4.32
HDAC3-201ENST00000305264 CDC42BPAQ5VT25 1732 aa42.04■■■■■ 4.32
HDAC3-201ENST00000305264 MYO5CQ9NQX4 1742 aa42.03■■■■■ 4.32
HDAC3-201ENST00000305264 PHLDB1Q86UU1 1377 aa42.02■■■■■ 4.32
HDAC3-201ENST00000305264 CCNB3Q8WWL7 1395 aa42■■■■■ 4.31
HDAC3-201ENST00000305264 GPATCH8Q9UKJ3 1502 aaKnown RBP41.98■■■■■ 4.31
HDAC3-201ENST00000305264 PREX2Q70Z35 1606 aa41.98■■■■■ 4.31
HDAC3-201ENST00000305264 CD109Q6YHK3 1445 aa41.96■■■■■ 4.31
HDAC3-201ENST00000305264 ITSN2Q9NZM3 1697 aa41.96■■■■■ 4.31
HDAC3-201ENST00000305264 CDC42BPBQ9Y5S2 1711 aa41.94■■■■■ 4.3
HDAC3-201ENST00000305264 TRHP20396 242 aaPredicted RBP41.94■■■■■ 4.3
HDAC3-201ENST00000305264 MYOM3Q5VTT5 1437 aa41.92■■■■■ 4.3
HDAC3-201ENST00000305264 TSPOAP1O95153 1857 aa41.91■■■■■ 4.3
HDAC3-201ENST00000305264 PLCH2O75038 1416 aa41.9■■■■■ 4.3
HDAC3-201ENST00000305264 PPRC1Q5VV67 1664 aaKnown RBP41.88■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms