RNA–Protein interactions for RNA: ENST00000302313.9

WDR48-201, Transcript of WD repeat domain 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR48, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-201ENST00000302313 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
WDR48-201ENST00000302313 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
WDR48-201ENST00000302313 ATP1B4Q9UN42 357 aaPredicted RBP10.36□□□□□ -0.75
WDR48-201ENST00000302313 ANO8Q9HCE9 1232 aaPredicted RBP10.35□□□□□ -0.75
WDR48-201ENST00000302313 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
WDR48-201ENST00000302313 MSH5O43196 834 aa10.35□□□□□ -0.75
WDR48-201ENST00000302313 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
WDR48-201ENST00000302313 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
WDR48-201ENST00000302313 CUX1P39880 1505 aa10.33□□□□□ -0.76
WDR48-201ENST00000302313 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
WDR48-201ENST00000302313 FANCIQ9NVI1 1328 aa10.32□□□□□ -0.76
WDR48-201ENST00000302313 FGD5Q6ZNL6 1462 aa10.31□□□□□ -0.76
WDR48-201ENST00000302313 SLC24A1O60721 1099 aa10.31□□□□□ -0.76
WDR48-201ENST00000302313 YTHDC1Q96MU7 727 aaKnown RBP10.31□□□□□ -0.76
WDR48-201ENST00000302313 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
WDR48-201ENST00000302313 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
WDR48-201ENST00000302313 ARHGAP35Q9NRY4 1499 aa10.29□□□□□ -0.76
WDR48-201ENST00000302313 CFAP43Q8NDM7 1665 aa10.29□□□□□ -0.76
WDR48-201ENST00000302313 RBM19Q9Y4C8 960 aaKnown RBP10.28□□□□□ -0.76
WDR48-201ENST00000302313 MAPKBP1O60336 1514 aa10.28□□□□□ -0.76
WDR48-201ENST00000302313 TIAM1Q13009 1591 aa10.28□□□□□ -0.76
WDR48-201ENST00000302313 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
WDR48-201ENST00000302313 URB2Q14146 1524 aaKnown RBP10.25□□□□□ -0.77
WDR48-201ENST00000302313 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
WDR48-201ENST00000302313 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
WDR48-201ENST00000302313 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
WDR48-201ENST00000302313 DNMBPQ6XZF7 1577 aa10.25□□□□□ -0.77
WDR48-201ENST00000302313 KANK4Q5T7N3 995 aaPredicted RBP10.24□□□□□ -0.77
WDR48-201ENST00000302313 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
WDR48-201ENST00000302313 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.775e-9■■■■■ 36.2
WDR48-201ENST00000302313 CARMIL1Q5VZK9 1371 aa10.21□□□□□ -0.77
WDR48-201ENST00000302313 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
WDR48-201ENST00000302313 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
WDR48-201ENST00000302313 IFT140Q96RY7 1462 aa10.19□□□□□ -0.78
WDR48-201ENST00000302313 LRRC9Q6ZRR7 1453 aa10.18□□□□□ -0.78
WDR48-201ENST00000302313 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
WDR48-201ENST00000302313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.17□□□□□ -0.78
WDR48-201ENST00000302313 SETD5Q9C0A6 1442 aa10.16□□□□□ -0.78
WDR48-201ENST00000302313 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
WDR48-201ENST00000302313 WDR97A6NE52 1622 aa10.15□□□□□ -0.78
WDR48-201ENST00000302313 ARID3CA6NKF2 412 aa10.15□□□□□ -0.78
WDR48-201ENST00000302313 DEKP35659 375 aaKnown RBP10.15□□□□□ -0.79
WDR48-201ENST00000302313 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
WDR48-201ENST00000302313 IGF1RP08069 1367 aa10.14□□□□□ -0.79
WDR48-201ENST00000302313 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
WDR48-201ENST00000302313 EFCAB5A4FU69 1503 aa10.13□□□□□ -0.79
WDR48-201ENST00000302313 ZNF608Q9ULD9 1512 aaPredicted RBP10.13□□□□□ -0.79
WDR48-201ENST00000302313 FHAD1B1AJZ9 1412 aa10.13□□□□□ -0.79
WDR48-201ENST00000302313 CTTNBP2Q8WZ74 1663 aa10.13□□□□□ -0.79
WDR48-201ENST00000302313 GRIN2BQ13224 1484 aa10.12□□□□□ -0.79
WDR48-201ENST00000302313 WDR62O43379 1518 aa10.11□□□□□ -0.79
WDR48-201ENST00000302313 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
WDR48-201ENST00000302313 ABCA10Q8WWZ4 1543 aa10.1□□□□□ -0.79
WDR48-201ENST00000302313 CUL7Q14999 1698 aa10.1□□□□□ -0.79
WDR48-201ENST00000302313 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
WDR48-201ENST00000302313 OSCARQ8IYS5 282 aa10.09□□□□□ -0.79
WDR48-201ENST00000302313 PPP1R15AO75807 674 aaPredicted RBP10.08□□□□□ -0.8
WDR48-201ENST00000302313 SNAPC4Q5SXM2 1469 aa10.07□□□□□ -0.8
WDR48-201ENST00000302313 CCER2I3L3R5 266 aa10.07□□□□□ -0.8
WDR48-201ENST00000302313 CASKIN1Q8WXD9 1431 aa10.06□□□□□ -0.8
WDR48-201ENST00000302313 LRRIQ1Q96JM4 1722 aa10.06□□□□□ -0.8
WDR48-201ENST00000302313 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
WDR48-201ENST00000302313 C11orf95C9JLR9 678 aaPredicted RBP10.04□□□□□ -0.8
WDR48-201ENST00000302313 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
WDR48-201ENST00000302313 SAMD9Q5K651 1589 aa10.03□□□□□ -0.8
WDR48-201ENST00000302313 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
WDR48-201ENST00000302313 PTPN23Q9H3S7 1636 aa10.03□□□□□ -0.8
WDR48-201ENST00000302313 KDM5BQ9UGL1 1544 aa10.03□□□□□ -0.8
WDR48-201ENST00000302313 PKNOX2Q96KN3 472 aa10.02□□□□□ -0.81
WDR48-201ENST00000302313 KCNH8Q96L42 1107 aa10.02□□□□□ -0.81
WDR48-201ENST00000302313 GCC2Q8IWJ2 1684 aa10.01□□□□□ -0.81
WDR48-201ENST00000302313 HFM1A2PYH4 1435 aa10□□□□□ -0.81
WDR48-201ENST00000302313 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
WDR48-201ENST00000302313 HECW1Q76N89 1606 aa9.99□□□□□ -0.81
WDR48-201ENST00000302313 FGD6Q6ZV73 1430 aa9.99□□□□□ -0.81
WDR48-201ENST00000302313 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
WDR48-201ENST00000302313 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
WDR48-201ENST00000302313 ARHGEF11O15085 1522 aa9.98□□□□□ -0.81
WDR48-201ENST00000302313 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
WDR48-201ENST00000302313 SUPT6HQ7KZ85 1726 aaKnown RBP9.98□□□□□ -0.81
WDR48-201ENST00000302313 CARMIL2Q6F5E8 1435 aa9.98□□□□□ -0.81
WDR48-201ENST00000302313 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
WDR48-201ENST00000302313 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
WDR48-201ENST00000302313 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
WDR48-201ENST00000302313 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
WDR48-201ENST00000302313 WASHC2CQ9Y4E1 1318 aa9.97□□□□□ -0.81
WDR48-201ENST00000302313 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.81
WDR48-201ENST00000302313 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.82
WDR48-201ENST00000302313 CCDC136Q96JN2 1154 aa9.96□□□□□ -0.82
WDR48-201ENST00000302313 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.82
WDR48-201ENST00000302313 DDX10Q13206 875 aaKnown RBP9.95□□□□□ -0.82
WDR48-201ENST00000302313 CDK11AQ9UQ88 783 aaPredicted RBP9.95□□□□□ -0.82
WDR48-201ENST00000302313 CYB5RLQ6IPT4 315 aa9.95□□□□□ -0.82
WDR48-201ENST00000302313 EHBP1L1Q8N3D4 1523 aa9.95□□□□□ -0.82
WDR48-201ENST00000302313 FHOD3Q2V2M9 1422 aa9.94□□□□□ -0.82
WDR48-201ENST00000302313 ITGAEP38570 1179 aa9.94□□□□□ -0.82
WDR48-201ENST00000302313 GRIN2AQ12879 1464 aa9.94□□□□□ -0.82
WDR48-201ENST00000302313 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
WDR48-201ENST00000302313 TCOF1Q13428 1488 aaKnown RBP9.94□□□□□ -0.82
WDR48-201ENST00000302313 NCOA2Q15596 1464 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms