RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 KCNH8Q96L42 1107 aa24.25■■□□□ 1.47
VPS37C-201ENST00000301765 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
VPS37C-201ENST00000301765 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
VPS37C-201ENST00000301765 FKBP8Q14318 412 aa24.16■■□□□ 1.46
VPS37C-201ENST00000301765 CLSPNQ9HAW4 1339 aa24.15■■□□□ 1.46
VPS37C-201ENST00000301765 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.44
VPS37C-201ENST00000301765 RBM19Q9Y4C8 960 aaKnown RBP24.07■■□□□ 1.44
VPS37C-201ENST00000301765 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
VPS37C-201ENST00000301765 TOPBP1Q92547 1522 aa24.02■■□□□ 1.43
VPS37C-201ENST00000301765 FAM50AQ14320 339 aaKnown RBP24.01■■□□□ 1.43
VPS37C-201ENST00000301765 PRDM2Q13029 1718 aa24■■□□□ 1.43
VPS37C-201ENST00000301765 FHOD3Q2V2M9 1422 aa23.99■■□□□ 1.43
VPS37C-201ENST00000301765 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
VPS37C-201ENST00000301765 RRBP1Q9P2E9 1410 aaKnown RBP23.97■■□□□ 1.43
VPS37C-201ENST00000301765 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
VPS37C-201ENST00000301765 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
VPS37C-201ENST00000301765 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
VPS37C-201ENST00000301765 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
VPS37C-201ENST00000301765 PHLDB1Q86UU1 1377 aa23.92■■□□□ 1.42
VPS37C-201ENST00000301765 RAB3GAP2Q9H2M9 1393 aa23.92■■□□□ 1.42
VPS37C-201ENST00000301765 MSH5O43196 834 aa23.9■■□□□ 1.42
VPS37C-201ENST00000301765 DNMBPQ6XZF7 1577 aa23.88■■□□□ 1.41
VPS37C-201ENST00000301765 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
VPS37C-201ENST00000301765 PRKCSHP14314 528 aaPredicted RBP23.86■■□□□ 1.41
VPS37C-201ENST00000301765 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
VPS37C-201ENST00000301765 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
VPS37C-201ENST00000301765 NEFLP07196 543 aa23.83■■□□□ 1.41
VPS37C-201ENST00000301765 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
VPS37C-201ENST00000301765 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
VPS37C-201ENST00000301765 TIAM1Q13009 1591 aa23.79■■□□□ 1.4
VPS37C-201ENST00000301765 PCF11O94913 1555 aaKnown RBP23.76■■□□□ 1.39
VPS37C-201ENST00000301765 ERICH6Q7L0X2 663 aa23.76■■□□□ 1.39
VPS37C-201ENST00000301765 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
VPS37C-201ENST00000301765 IRX6P78412 446 aaPredicted RBP23.7■■□□□ 1.39
VPS37C-201ENST00000301765 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
VPS37C-201ENST00000301765 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
VPS37C-201ENST00000301765 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.386e-8■■■■■ 32.6
VPS37C-201ENST00000301765 FHAD1B1AJZ9 1412 aa23.69■■□□□ 1.38
VPS37C-201ENST00000301765 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
VPS37C-201ENST00000301765 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
VPS37C-201ENST00000301765 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.38
VPS37C-201ENST00000301765 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
VPS37C-201ENST00000301765 MTUS2Q5JR59 1369 aa23.58■■□□□ 1.37
VPS37C-201ENST00000301765 CASKIN1Q8WXD9 1431 aa23.58■■□□□ 1.36
VPS37C-201ENST00000301765 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
VPS37C-201ENST00000301765 MAP3K1Q13233 1512 aa23.53■■□□□ 1.36
VPS37C-201ENST00000301765 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
VPS37C-201ENST00000301765 DEKP35659 375 aaKnown RBP23.51■■□□□ 1.35
VPS37C-201ENST00000301765 CUL7Q14999 1698 aa23.51■■□□□ 1.35
VPS37C-201ENST00000301765 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
VPS37C-201ENST00000301765 FYCO1Q9BQS8 1478 aa23.51■■□□□ 1.35
VPS37C-201ENST00000301765 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
VPS37C-201ENST00000301765 ANP32CO43423 234 aa23.49■■□□□ 1.35
VPS37C-201ENST00000301765 RRP7BPQ9NSQ0 103 aa23.49■■□□□ 1.35
VPS37C-201ENST00000301765 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
VPS37C-201ENST00000301765 FMN1Q68DA7 1419 aa23.48■■□□□ 1.35
VPS37C-201ENST00000301765 CTTNBP2Q8WZ74 1663 aa23.47■■□□□ 1.35
VPS37C-201ENST00000301765 ANO8Q9HCE9 1232 aaPredicted RBP23.46■■□□□ 1.35
VPS37C-201ENST00000301765 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
VPS37C-201ENST00000301765 NBR1Q14596 966 aa23.46■■□□□ 1.35
VPS37C-201ENST00000301765 CFAP43Q8NDM7 1665 aa23.45■■□□□ 1.35
VPS37C-201ENST00000301765 EFCAB5A4FU69 1503 aa23.45■■□□□ 1.34
VPS37C-201ENST00000301765 FBLN2P98095 1184 aa23.44■■□□□ 1.34
VPS37C-201ENST00000301765 FGD6Q6ZV73 1430 aa23.44■■□□□ 1.34
VPS37C-201ENST00000301765 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
VPS37C-201ENST00000301765 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
VPS37C-201ENST00000301765 FANCIQ9NVI1 1328 aa23.39■■□□□ 1.33
VPS37C-201ENST00000301765 NCOA2Q15596 1464 aa23.38■■□□□ 1.33
VPS37C-201ENST00000301765 MAGI3Q5TCQ9 1506 aa23.37■■□□□ 1.33
VPS37C-201ENST00000301765 TONSLQ96HA7 1378 aa23.36■■□□□ 1.33
VPS37C-201ENST00000301765 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
VPS37C-201ENST00000301765 CCER2I3L3R5 266 aa23.35■■□□□ 1.33
VPS37C-201ENST00000301765 FOXD1Q16676 465 aa23.34■■□□□ 1.33
VPS37C-201ENST00000301765 SAMD9Q5K651 1589 aa23.33■■□□□ 1.33
VPS37C-201ENST00000301765 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.32
VPS37C-201ENST00000301765 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
VPS37C-201ENST00000301765 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
VPS37C-201ENST00000301765 ZNF644Q9H582 1327 aaPredicted RBP23.31■■□□□ 1.32
VPS37C-201ENST00000301765 TIMELESSQ9UNS1 1208 aa23.29■■□□□ 1.32
VPS37C-201ENST00000301765 MYOM3Q5VTT5 1437 aa23.28■■□□□ 1.32
VPS37C-201ENST00000301765 CCDC136Q96JN2 1154 aa23.26■■□□□ 1.31
VPS37C-201ENST00000301765 CCDC18Q5T9S5 1454 aa23.26■■□□□ 1.31
VPS37C-201ENST00000301765 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
VPS37C-201ENST00000301765 NAIPQ13075 1403 aa23.23■■□□□ 1.31
VPS37C-201ENST00000301765 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
VPS37C-201ENST00000301765 CCDC184Q52MB2 194 aa23.23■■□□□ 1.31
VPS37C-201ENST00000301765 RTN4Q9NQC3 1192 aaKnown RBP23.22■■□□□ 1.31
VPS37C-201ENST00000301765 B4GALNT3Q6L9W6 998 aa23.22■■□□□ 1.31
VPS37C-201ENST00000301765 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
VPS37C-201ENST00000301765 PAK3O75914 559 aaPredicted RBP23.21■■□□□ 1.31
VPS37C-201ENST00000301765 IQGAP2Q13576 1575 aa23.2■■□□□ 1.3
VPS37C-201ENST00000301765 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
VPS37C-201ENST00000301765 EPRSP07814 1512 aaKnown RBP23.19■■□□□ 1.3
VPS37C-201ENST00000301765 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
VPS37C-201ENST00000301765 HFM1A2PYH4 1435 aa23.17■■□□□ 1.3
VPS37C-201ENST00000301765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
VPS37C-201ENST00000301765 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
VPS37C-201ENST00000301765 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
VPS37C-201ENST00000301765 WASHC2AQ641Q2 1341 aa23.16■■□□□ 1.3
VPS37C-201ENST00000301765 THOC2Q8NI27 1593 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms