RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
VPS37C-201ENST00000301765 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
VPS37C-201ENST00000301765 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
VPS37C-201ENST00000301765 SUPT5HO00267 1087 aaKnown RBP28.8■■■□□ 2.2
VPS37C-201ENST00000301765 ZCCHC6Q5VYS8 1495 aaKnown RBP28.61■■■□□ 2.17
VPS37C-201ENST00000301765 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
VPS37C-201ENST00000301765 HRCP23327 699 aa28.26■■■□□ 2.11
VPS37C-201ENST00000301765 PPARGC1BQ86YN6 1023 aaKnown RBP28.09■■■□□ 2.09
VPS37C-201ENST00000301765 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
VPS37C-201ENST00000301765 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
VPS37C-201ENST00000301765 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.05
VPS37C-201ENST00000301765 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
VPS37C-201ENST00000301765 ABCC9O60706 1549 aa27.41■■□□□ 1.98
VPS37C-201ENST00000301765 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
VPS37C-201ENST00000301765 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
VPS37C-201ENST00000301765 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
VPS37C-201ENST00000301765 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
VPS37C-201ENST00000301765 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.91
VPS37C-201ENST00000301765 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
VPS37C-201ENST00000301765 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
VPS37C-201ENST00000301765 TRIM26Q12899 539 aaPredicted RBP26.76■■□□□ 1.87
VPS37C-201ENST00000301765 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
VPS37C-201ENST00000301765 NACADO15069 1562 aa26.64■■□□□ 1.86
VPS37C-201ENST00000301765 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
VPS37C-201ENST00000301765 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
VPS37C-201ENST00000301765 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
VPS37C-201ENST00000301765 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
VPS37C-201ENST00000301765 WIZO95785 1651 aa26.4■■□□□ 1.82
VPS37C-201ENST00000301765 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
VPS37C-201ENST00000301765 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
VPS37C-201ENST00000301765 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
VPS37C-201ENST00000301765 GTF3C3Q9Y5Q9 886 aa26.12■■□□□ 1.77
VPS37C-201ENST00000301765 MYT1Q01538 1121 aa26.01■■□□□ 1.76
VPS37C-201ENST00000301765 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
VPS37C-201ENST00000301765 BAZ1AQ9NRL2 1556 aaPredicted RBP26■■□□□ 1.75
VPS37C-201ENST00000301765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
VPS37C-201ENST00000301765 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
VPS37C-201ENST00000301765 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
VPS37C-201ENST00000301765 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
VPS37C-201ENST00000301765 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
VPS37C-201ENST00000301765 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
VPS37C-201ENST00000301765 CENPBP07199 599 aaPredicted RBP25.76■■□□□ 1.71
VPS37C-201ENST00000301765 CCER1Q8TC90 406 aaPredicted RBP25.74■■□□□ 1.71
VPS37C-201ENST00000301765 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
VPS37C-201ENST00000301765 DIEXFQ68CQ4 756 aaKnown RBP25.72■■□□□ 1.71
VPS37C-201ENST00000301765 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
VPS37C-201ENST00000301765 YTHDC1Q96MU7 727 aaKnown RBP25.68■■□□□ 1.7
VPS37C-201ENST00000301765 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
VPS37C-201ENST00000301765 SOGA1O94964 1423 aa25.64■■□□□ 1.69
VPS37C-201ENST00000301765 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
VPS37C-201ENST00000301765 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
VPS37C-201ENST00000301765 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
VPS37C-201ENST00000301765 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.66
VPS37C-201ENST00000301765 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
VPS37C-201ENST00000301765 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
VPS37C-201ENST00000301765 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
VPS37C-201ENST00000301765 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
VPS37C-201ENST00000301765 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
VPS37C-201ENST00000301765 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
VPS37C-201ENST00000301765 MIER1Q8N108 512 aa25.11■■□□□ 1.61
VPS37C-201ENST00000301765 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
VPS37C-201ENST00000301765 HNRNPUL2Q1KMD3 747 aaKnown RBP25.09■■□□□ 1.61
VPS37C-201ENST00000301765 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
VPS37C-201ENST00000301765 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
VPS37C-201ENST00000301765 EEA1Q15075 1411 aa24.93■■□□□ 1.58
VPS37C-201ENST00000301765 RAPGEF2Q9Y4G8 1499 aa24.92■■□□□ 1.58
VPS37C-201ENST00000301765 BCL11AQ9H165 835 aa24.86■■□□□ 1.57
VPS37C-201ENST00000301765 CLIP1P30622 1438 aa24.82■■□□□ 1.56
VPS37C-201ENST00000301765 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
VPS37C-201ENST00000301765 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
VPS37C-201ENST00000301765 SUPT16HQ9Y5B9 1047 aaKnown RBP24.71■■□□□ 1.55
VPS37C-201ENST00000301765 CUX1P39880 1505 aa24.69■■□□□ 1.54
VPS37C-201ENST00000301765 TOP2BQ02880 1626 aa24.69■■□□□ 1.54
VPS37C-201ENST00000301765 ANP32EQ9BTT0 268 aa24.69■■□□□ 1.54
VPS37C-201ENST00000301765 APLP2Q06481 763 aa24.65■■□□□ 1.54
VPS37C-201ENST00000301765 TSHZ2Q9NRE2 1034 aa24.64■■□□□ 1.54
VPS37C-201ENST00000301765 KIF21BO75037 1637 aa24.64■■□□□ 1.53
VPS37C-201ENST00000301765 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
VPS37C-201ENST00000301765 CFTRP13569 1480 aa24.59■■□□□ 1.53
VPS37C-201ENST00000301765 KANK4Q5T7N3 995 aaPredicted RBP24.59■■□□□ 1.53
VPS37C-201ENST00000301765 VPS8Q8N3P4 1428 aa24.57■■□□□ 1.52
VPS37C-201ENST00000301765 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
VPS37C-201ENST00000301765 BCANQ96GW7 911 aa24.53■■□□□ 1.52
VPS37C-201ENST00000301765 BIVM-ERCC5R4GMW8 1640 aa24.51■■□□□ 1.51
VPS37C-201ENST00000301765 PRXQ9BXM0 1461 aa24.5■■□□□ 1.51
VPS37C-201ENST00000301765 KIF27Q86VH2 1401 aa24.47■■□□□ 1.51
VPS37C-201ENST00000301765 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
VPS37C-201ENST00000301765 P3H3Q8IVL6 736 aa24.45■■□□□ 1.51
VPS37C-201ENST00000301765 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
VPS37C-201ENST00000301765 CUX2O14529 1486 aa24.42■■□□□ 1.5
VPS37C-201ENST00000301765 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
VPS37C-201ENST00000301765 ITGAEP38570 1179 aa24.42■■□□□ 1.5
VPS37C-201ENST00000301765 IGF1RP08069 1367 aa24.38■■□□□ 1.49
VPS37C-201ENST00000301765 NESP48681 1621 aa24.38■■□□□ 1.49
VPS37C-201ENST00000301765 DHX57Q6P158 1386 aaKnown RBP24.34■■□□□ 1.49
VPS37C-201ENST00000301765 ATP1B4Q9UN42 357 aaPredicted RBP24.33■■□□□ 1.49
VPS37C-201ENST00000301765 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
VPS37C-201ENST00000301765 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
VPS37C-201ENST00000301765 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
VPS37C-201ENST00000301765 ARHGAP35Q9NRY4 1499 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms