RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
UBLCP1-201ENST00000296786 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
UBLCP1-201ENST00000296786 DHX57Q6P158 1386 aaKnown RBP13.81□□□□□ -0.2
UBLCP1-201ENST00000296786 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
UBLCP1-201ENST00000296786 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
UBLCP1-201ENST00000296786 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
UBLCP1-201ENST00000296786 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
UBLCP1-201ENST00000296786 FHOD3Q2V2M9 1422 aa13.77□□□□□ -0.2
UBLCP1-201ENST00000296786 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.2
UBLCP1-201ENST00000296786 P3H3Q8IVL6 736 aa13.76□□□□□ -0.21
UBLCP1-201ENST00000296786 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
UBLCP1-201ENST00000296786 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
UBLCP1-201ENST00000296786 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
UBLCP1-201ENST00000296786 ITGAEP38570 1179 aa13.73□□□□□ -0.21
UBLCP1-201ENST00000296786 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
UBLCP1-201ENST00000296786 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
UBLCP1-201ENST00000296786 PHLDB1Q86UU1 1377 aa13.72□□□□□ -0.21
UBLCP1-201ENST00000296786 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
UBLCP1-201ENST00000296786 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.21
UBLCP1-201ENST00000296786 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBLCP1-201ENST00000296786 SAMD9Q5K651 1589 aa13.71□□□□□ -0.22
UBLCP1-201ENST00000296786 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.22
UBLCP1-201ENST00000296786 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
UBLCP1-201ENST00000296786 ATP1B4Q9UN42 357 aaPredicted RBP13.69□□□□□ -0.22
UBLCP1-201ENST00000296786 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
UBLCP1-201ENST00000296786 RAB3GAP2Q9H2M9 1393 aa13.68□□□□□ -0.22
UBLCP1-201ENST00000296786 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
UBLCP1-201ENST00000296786 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
UBLCP1-201ENST00000296786 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
UBLCP1-201ENST00000296786 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
UBLCP1-201ENST00000296786 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
UBLCP1-201ENST00000296786 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
UBLCP1-201ENST00000296786 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
UBLCP1-201ENST00000296786 MIER1Q8N108 512 aa13.62□□□□□ -0.23
UBLCP1-201ENST00000296786 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
UBLCP1-201ENST00000296786 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
UBLCP1-201ENST00000296786 MRC2Q9UBG0 1479 aa13.59□□□□□ -0.23
UBLCP1-201ENST00000296786 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
UBLCP1-201ENST00000296786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBLCP1-201ENST00000296786 SUPT6HQ7KZ85 1726 aaKnown RBP13.57□□□□□ -0.24
UBLCP1-201ENST00000296786 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
UBLCP1-201ENST00000296786 MTUS2Q5JR59 1369 aa13.57□□□□□ -0.24
UBLCP1-201ENST00000296786 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
UBLCP1-201ENST00000296786 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
UBLCP1-201ENST00000296786 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
UBLCP1-201ENST00000296786 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
UBLCP1-201ENST00000296786 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.24
UBLCP1-201ENST00000296786 HECW1Q76N89 1606 aa13.52□□□□□ -0.24
UBLCP1-201ENST00000296786 WDR62O43379 1518 aa13.51□□□□□ -0.25
UBLCP1-201ENST00000296786 MAGI3Q5TCQ9 1506 aa13.51□□□□□ -0.25
UBLCP1-201ENST00000296786 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
UBLCP1-201ENST00000296786 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
UBLCP1-201ENST00000296786 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
UBLCP1-201ENST00000296786 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
UBLCP1-201ENST00000296786 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
UBLCP1-201ENST00000296786 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
UBLCP1-201ENST00000296786 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
UBLCP1-201ENST00000296786 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
UBLCP1-201ENST00000296786 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
UBLCP1-201ENST00000296786 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
UBLCP1-201ENST00000296786 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
UBLCP1-201ENST00000296786 EPRSP07814 1512 aaKnown RBP13.45□□□□□ -0.26
UBLCP1-201ENST00000296786 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
UBLCP1-201ENST00000296786 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
UBLCP1-201ENST00000296786 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
UBLCP1-201ENST00000296786 NAIPQ13075 1403 aa13.42□□□□□ -0.26
UBLCP1-201ENST00000296786 UACAQ9BZF9 1416 aa13.41□□□□□ -0.26
UBLCP1-201ENST00000296786 TCOF1Q13428 1488 aaKnown RBP13.4□□□□□ -0.26
UBLCP1-201ENST00000296786 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
UBLCP1-201ENST00000296786 KIAA0586Q9BVV6 1533 aa13.39□□□□□ -0.27
UBLCP1-201ENST00000296786 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
UBLCP1-201ENST00000296786 DISP1Q96F81 1524 aa13.38□□□□□ -0.27
UBLCP1-201ENST00000296786 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
UBLCP1-201ENST00000296786 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
UBLCP1-201ENST00000296786 ARID3CA6NKF2 412 aa13.35□□□□□ -0.27
UBLCP1-201ENST00000296786 PPP1R15AO75807 674 aaPredicted RBP13.34□□□□□ -0.27
UBLCP1-201ENST00000296786 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
UBLCP1-201ENST00000296786 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
UBLCP1-201ENST00000296786 KDM6BO15054 1643 aa13.33□□□□□ -0.28
UBLCP1-201ENST00000296786 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
UBLCP1-201ENST00000296786 NUP153P49790 1475 aaKnown RBP13.33□□□□□ -0.28
UBLCP1-201ENST00000296786 TONSLQ96HA7 1378 aa13.33□□□□□ -0.28
UBLCP1-201ENST00000296786 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
UBLCP1-201ENST00000296786 RRP7BPQ9NSQ0 103 aa13.31□□□□□ -0.28
UBLCP1-201ENST00000296786 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
UBLCP1-201ENST00000296786 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
UBLCP1-201ENST00000296786 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
UBLCP1-201ENST00000296786 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
UBLCP1-201ENST00000296786 DENND4BO75064 1496 aaPredicted RBP13.28□□□□□ -0.28
UBLCP1-201ENST00000296786 KDM5BQ9UGL1 1544 aa13.27□□□□□ -0.28
UBLCP1-201ENST00000296786 DDX10Q13206 875 aaKnown RBP13.27□□□□□ -0.29
UBLCP1-201ENST00000296786 HIRIP3Q9BW71 556 aaPredicted RBP13.27□□□□□ -0.29
UBLCP1-201ENST00000296786 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
UBLCP1-201ENST00000296786 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
UBLCP1-201ENST00000296786 DAPK1P53355 1430 aa13.25□□□□□ -0.29
UBLCP1-201ENST00000296786 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
UBLCP1-201ENST00000296786 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
UBLCP1-201ENST00000296786 FBLN2P98095 1184 aa13.23□□□□□ -0.29
UBLCP1-201ENST00000296786 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
UBLCP1-201ENST00000296786 KCNH8Q96L42 1107 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms