RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
UBLCP1-201ENST00000296786 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
UBLCP1-201ENST00000296786 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
UBLCP1-201ENST00000296786 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
UBLCP1-201ENST00000296786 DCAF8L2P0C7V8 631 aa16.3■□□□□ 0.2
UBLCP1-201ENST00000296786 DCAF1Q9Y4B6 1507 aa16.28■□□□□ 0.2
UBLCP1-201ENST00000296786 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
UBLCP1-201ENST00000296786 POTEDQ86YR6 584 aa16■□□□□ 0.15
UBLCP1-201ENST00000296786 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
UBLCP1-201ENST00000296786 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
UBLCP1-201ENST00000296786 ABCC9O60706 1549 aa15.79■□□□□ 0.12
UBLCP1-201ENST00000296786 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
UBLCP1-201ENST00000296786 NACADO15069 1562 aa15.68■□□□□ 0.1
UBLCP1-201ENST00000296786 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
UBLCP1-201ENST00000296786 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
UBLCP1-201ENST00000296786 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
UBLCP1-201ENST00000296786 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
UBLCP1-201ENST00000296786 UNC13AQ9UPW8 1703 aa15.34■□□□□ 0.05
UBLCP1-201ENST00000296786 WIZO95785 1651 aa15.32■□□□□ 0.04
UBLCP1-201ENST00000296786 LOC105371045A0A1W2PR82 267 aa15.26■□□□□ 0.03
UBLCP1-201ENST00000296786 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
UBLCP1-201ENST00000296786 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
UBLCP1-201ENST00000296786 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
UBLCP1-201ENST00000296786 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
UBLCP1-201ENST00000296786 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0
UBLCP1-201ENST00000296786 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
UBLCP1-201ENST00000296786 HRCP23327 699 aa15.05■□□□□ -0
UBLCP1-201ENST00000296786 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
UBLCP1-201ENST00000296786 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
UBLCP1-201ENST00000296786 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
UBLCP1-201ENST00000296786 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
UBLCP1-201ENST00000296786 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
UBLCP1-201ENST00000296786 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
UBLCP1-201ENST00000296786 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
UBLCP1-201ENST00000296786 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
UBLCP1-201ENST00000296786 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
UBLCP1-201ENST00000296786 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
UBLCP1-201ENST00000296786 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
UBLCP1-201ENST00000296786 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
UBLCP1-201ENST00000296786 SOGA1O94964 1423 aa14.67□□□□□ -0.06
UBLCP1-201ENST00000296786 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.07
UBLCP1-201ENST00000296786 EEA1Q15075 1411 aa14.62□□□□□ -0.07
UBLCP1-201ENST00000296786 RUSC2Q8N2Y8 1516 aa14.62□□□□□ -0.07
UBLCP1-201ENST00000296786 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
UBLCP1-201ENST00000296786 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
UBLCP1-201ENST00000296786 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
UBLCP1-201ENST00000296786 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
UBLCP1-201ENST00000296786 ZEB1P37275 1124 aaPredicted RBP14.51□□□□□ -0.09
UBLCP1-201ENST00000296786 GOLGA3Q08378 1498 aa14.51□□□□□ -0.09
UBLCP1-201ENST00000296786 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
UBLCP1-201ENST00000296786 KIF21BO75037 1637 aa14.49□□□□□ -0.09
UBLCP1-201ENST00000296786 UBTFP17480 764 aaKnown RBP14.47□□□□□ -0.09
UBLCP1-201ENST00000296786 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
UBLCP1-201ENST00000296786 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
UBLCP1-201ENST00000296786 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.1
UBLCP1-201ENST00000296786 CEP164Q9UPV0 1460 aa14.45□□□□□ -0.1
UBLCP1-201ENST00000296786 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
UBLCP1-201ENST00000296786 TTBK1Q5TCY1 1321 aaPredicted RBP14.36□□□□□ -0.11
UBLCP1-201ENST00000296786 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
UBLCP1-201ENST00000296786 CUX1P39880 1505 aa14.32□□□□□ -0.12
UBLCP1-201ENST00000296786 CFTRP13569 1480 aa14.32□□□□□ -0.12
UBLCP1-201ENST00000296786 CLIP1P30622 1438 aa14.31□□□□□ -0.12
UBLCP1-201ENST00000296786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
UBLCP1-201ENST00000296786 ERICH3Q5RHP9 1530 aa14.26□□□□□ -0.13
UBLCP1-201ENST00000296786 CCER1Q8TC90 406 aaPredicted RBP14.26□□□□□ -0.13
UBLCP1-201ENST00000296786 VPS8Q8N3P4 1428 aa14.25□□□□□ -0.13
UBLCP1-201ENST00000296786 PRXQ9BXM0 1461 aa14.23□□□□□ -0.13
UBLCP1-201ENST00000296786 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
UBLCP1-201ENST00000296786 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
UBLCP1-201ENST00000296786 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
UBLCP1-201ENST00000296786 CADPSQ9ULU8 1353 aa14.15□□□□□ -0.14
UBLCP1-201ENST00000296786 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
UBLCP1-201ENST00000296786 APLP2Q06481 763 aa14.12□□□□□ -0.15
UBLCP1-201ENST00000296786 CUX2O14529 1486 aa14.08□□□□□ -0.16
UBLCP1-201ENST00000296786 FGD5Q6ZNL6 1462 aa14.07□□□□□ -0.16
UBLCP1-201ENST00000296786 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
UBLCP1-201ENST00000296786 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
UBLCP1-201ENST00000296786 ARHGAP35Q9NRY4 1499 aa14.02□□□□□ -0.16
UBLCP1-201ENST00000296786 IGF1RP08069 1367 aa14.02□□□□□ -0.16
UBLCP1-201ENST00000296786 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
UBLCP1-201ENST00000296786 NESP48681 1621 aa13.97□□□□□ -0.17
UBLCP1-201ENST00000296786 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
UBLCP1-201ENST00000296786 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.17
UBLCP1-201ENST00000296786 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
UBLCP1-201ENST00000296786 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
UBLCP1-201ENST00000296786 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
UBLCP1-201ENST00000296786 ABCA10Q8WWZ4 1543 aa13.92□□□□□ -0.18
UBLCP1-201ENST00000296786 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
UBLCP1-201ENST00000296786 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
UBLCP1-201ENST00000296786 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.18
UBLCP1-201ENST00000296786 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
UBLCP1-201ENST00000296786 CUL7Q14999 1698 aa13.89□□□□□ -0.19
UBLCP1-201ENST00000296786 CTTNBP2Q8WZ74 1663 aa13.89□□□□□ -0.19
UBLCP1-201ENST00000296786 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
UBLCP1-201ENST00000296786 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
UBLCP1-201ENST00000296786 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
UBLCP1-201ENST00000296786 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
UBLCP1-201ENST00000296786 CFAP43Q8NDM7 1665 aa13.85□□□□□ -0.19
UBLCP1-201ENST00000296786 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
UBLCP1-201ENST00000296786 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms