RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 TIAM1Q13009 1591 aa13.89□□□□□ -0.19
CCR1-201ENST00000296140 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
CCR1-201ENST00000296140 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
CCR1-201ENST00000296140 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
CCR1-201ENST00000296140 CARMIL1Q5VZK9 1371 aa13.85□□□□□ -0.19
CCR1-201ENST00000296140 WDR97A6NE52 1622 aa13.85□□□□□ -0.19
CCR1-201ENST00000296140 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
CCR1-201ENST00000296140 SETD5Q9C0A6 1442 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 LRRC9Q6ZRR7 1453 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 BCANQ96GW7 911 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
CCR1-201ENST00000296140 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
CCR1-201ENST00000296140 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
CCR1-201ENST00000296140 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
CCR1-201ENST00000296140 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
CCR1-201ENST00000296140 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
CCR1-201ENST00000296140 PPP1R15AO75807 674 aaPredicted RBP13.75□□□□□ -0.21
CCR1-201ENST00000296140 FKBP8Q14318 412 aa13.74□□□□□ -0.21
CCR1-201ENST00000296140 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
CCR1-201ENST00000296140 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
CCR1-201ENST00000296140 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
CCR1-201ENST00000296140 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
CCR1-201ENST00000296140 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
CCR1-201ENST00000296140 TRIM52Q96A61 297 aa13.72□□□□□ -0.21
CCR1-201ENST00000296140 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
CCR1-201ENST00000296140 FANCD2Q9BXW9 1451 aa13.65□□□□□ -0.22
CCR1-201ENST00000296140 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
CCR1-201ENST00000296140 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
CCR1-201ENST00000296140 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
CCR1-201ENST00000296140 FGD6Q6ZV73 1430 aa13.63□□□□□ -0.23
CCR1-201ENST00000296140 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
CCR1-201ENST00000296140 ANP32CO43423 234 aa13.62□□□□□ -0.23
CCR1-201ENST00000296140 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
CCR1-201ENST00000296140 TONSLQ96HA7 1378 aa13.61□□□□□ -0.23
CCR1-201ENST00000296140 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
CCR1-201ENST00000296140 NESP48681 1621 aa13.6□□□□□ -0.23
CCR1-201ENST00000296140 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
CCR1-201ENST00000296140 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCR1-201ENST00000296140 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
CCR1-201ENST00000296140 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.23
CCR1-201ENST00000296140 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
CCR1-201ENST00000296140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCR1-201ENST00000296140 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
CCR1-201ENST00000296140 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
CCR1-201ENST00000296140 NEFLP07196 543 aa13.56□□□□□ -0.24
CCR1-201ENST00000296140 PTPN23Q9H3S7 1636 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 NAIPQ13075 1403 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
CCR1-201ENST00000296140 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
CCR1-201ENST00000296140 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
CCR1-201ENST00000296140 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
CCR1-201ENST00000296140 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
CCR1-201ENST00000296140 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
CCR1-201ENST00000296140 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
CCR1-201ENST00000296140 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
CCR1-201ENST00000296140 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
CCR1-201ENST00000296140 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.24
CCR1-201ENST00000296140 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.24
CCR1-201ENST00000296140 CUL7Q14999 1698 aa13.51□□□□□ -0.25
CCR1-201ENST00000296140 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
CCR1-201ENST00000296140 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCR1-201ENST00000296140 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
CCR1-201ENST00000296140 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
CCR1-201ENST00000296140 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
CCR1-201ENST00000296140 URB2Q14146 1524 aaKnown RBP13.48□□□□□ -0.25
CCR1-201ENST00000296140 DENND4BO75064 1496 aaPredicted RBP13.48□□□□□ -0.25
CCR1-201ENST00000296140 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
CCR1-201ENST00000296140 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
CCR1-201ENST00000296140 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
CCR1-201ENST00000296140 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
CCR1-201ENST00000296140 FOXD1Q16676 465 aa13.46□□□□□ -0.26
CCR1-201ENST00000296140 KDM6BO15054 1643 aa13.44□□□□□ -0.26
CCR1-201ENST00000296140 MSH5O43196 834 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 SUPT6HQ7KZ85 1726 aaKnown RBP13.42□□□□□ -0.26
CCR1-201ENST00000296140 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
CCR1-201ENST00000296140 EHBP1L1Q8N3D4 1523 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
CCR1-201ENST00000296140 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
CCR1-201ENST00000296140 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
CCR1-201ENST00000296140 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
CCR1-201ENST00000296140 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
CCR1-201ENST00000296140 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
CCR1-201ENST00000296140 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCR1-201ENST00000296140 MPHOSPH9Q99550 1183 aa13.37□□□□□ -0.27
CCR1-201ENST00000296140 THOC2Q8NI27 1593 aaKnown RBP13.36□□□□□ -0.27
CCR1-201ENST00000296140 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
CCR1-201ENST00000296140 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
CCR1-201ENST00000296140 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
CCR1-201ENST00000296140 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
CCR1-201ENST00000296140 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
CCR1-201ENST00000296140 HECW1Q76N89 1606 aa13.34□□□□□ -0.27
CCR1-201ENST00000296140 GCC2Q8IWJ2 1684 aa13.34□□□□□ -0.27
CCR1-201ENST00000296140 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
CCR1-201ENST00000296140 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
CCR1-201ENST00000296140 CNGB1Q14028 1251 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms