RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 IGF1RP08069 1367 aa34.27■■■■□ 3.08
CXCL3-201ENST00000296026 CUL7Q14999 1698 aa34.21■■■■□ 3.07
CXCL3-201ENST00000296026 KIAA0586Q9BVV6 1533 aa34.14■■■■□ 3.06
CXCL3-201ENST00000296026 CARMIL1Q5VZK9 1371 aa34.05■■■■□ 3.04
CXCL3-201ENST00000296026 KIF13AQ9H1H9 1805 aa34■■■■□ 3.03
CXCL3-201ENST00000296026 NPM1P06748 294 aaKnown RBP eCLIP33.97■■■■□ 3.03
CXCL3-201ENST00000296026 ADCY10Q96PN6 1610 aa33.95■■■■□ 3.03
CXCL3-201ENST00000296026 MAPKBP1O60336 1514 aa33.89■■■■□ 3.02
CXCL3-201ENST00000296026 ABCC10Q5T3U5 1492 aa33.87■■■■□ 3.01
CXCL3-201ENST00000296026 FAM69CQ0P6D2 419 aa33.85■■■■□ 3.01
CXCL3-201ENST00000296026 IQGAP2Q13576 1575 aa33.82■■■■□ 3
CXCL3-201ENST00000296026 PTPRGP23470 1445 aa33.82■■■■□ 3
CXCL3-201ENST00000296026 CARMIL2Q6F5E8 1435 aa33.81■■■■□ 3
CXCL3-201ENST00000296026 TTBK1Q5TCY1 1321 aaPredicted RBP33.79■■■■□ 3
CXCL3-201ENST00000296026 DIP2BQ9P265 1576 aa33.78■■■■□ 3
CXCL3-201ENST00000296026 AEBP2Q6ZN18 517 aaPredicted RBP33.77■■■■□ 3
CXCL3-201ENST00000296026 TNIKQ9UKE5 1360 aa33.76■■■■□ 3
CXCL3-201ENST00000296026 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
CXCL3-201ENST00000296026 DISP1Q96F81 1524 aa33.66■■■□□ 2.98
CXCL3-201ENST00000296026 ABCC2Q92887 1545 aa33.63■■■□□ 2.97
CXCL3-201ENST00000296026 UGGT2Q9NYU1 1516 aa33.6■■■□□ 2.97
CXCL3-201ENST00000296026 UHRF1BP1LA0JNW5 1464 aa33.57■■■□□ 2.97
CXCL3-201ENST00000296026 UACAQ9BZF9 1416 aa33.57■■■□□ 2.96
CXCL3-201ENST00000296026 TSPOAP1O95153 1857 aa33.55■■■□□ 2.96
CXCL3-201ENST00000296026 KIAA0556O60303 1618 aa33.52■■■□□ 2.96
CXCL3-201ENST00000296026 ASXL2Q76L83 1435 aa33.52■■■□□ 2.96
CXCL3-201ENST00000296026 PLB1Q6P1J6 1458 aa33.5■■■□□ 2.95
CXCL3-201ENST00000296026 KDM6BO15054 1643 aa33.49■■■□□ 2.95
CXCL3-201ENST00000296026 CTTNBP2Q8WZ74 1663 aa33.48■■■□□ 2.95
CXCL3-201ENST00000296026 KDM5BQ9UGL1 1544 aa33.43■■■□□ 2.94
CXCL3-201ENST00000296026 GLI2P10070 1586 aa33.41■■■□□ 2.94
CXCL3-201ENST00000296026 PRXQ9BXM0 1461 aa33.4■■■□□ 2.94
CXCL3-201ENST00000296026 ZCCHC11Q5TAX3 1644 aaKnown RBP33.36■■■□□ 2.93
CXCL3-201ENST00000296026 GOLGA3Q08378 1498 aa33.34■■■□□ 2.93
CXCL3-201ENST00000296026 PPRC1Q5VV67 1664 aaKnown RBP33.33■■■□□ 2.93
CXCL3-201ENST00000296026 EPRSP07814 1512 aaKnown RBP33.31■■■□□ 2.92
CXCL3-201ENST00000296026 MAP3K4Q9Y6R4 1608 aa33.24■■■□□ 2.91
CXCL3-201ENST00000296026 ABCA8O94911 1581 aa33.21■■■□□ 2.91
CXCL3-201ENST00000296026 WDR7Q9Y4E6 1490 aa33.19■■■□□ 2.9
CXCL3-201ENST00000296026 CSRNP3Q8WYN3 585 aa33.17■■■□□ 2.9
CXCL3-201ENST00000296026 TEX14Q8IWB6 1497 aa33.14■■■□□ 2.9
CXCL3-201ENST00000296026 KDM4FA0A1W2PPD8 638 aa33.13■■■□□ 2.89
CXCL3-201ENST00000296026 COL17A1Q9UMD9 1497 aaPredicted RBP33.11■■■□□ 2.89
CXCL3-201ENST00000296026 P3H3Q8IVL6 736 aa33.09■■■□□ 2.89
CXCL3-201ENST00000296026 FAM9AQ8IZU1 332 aaPredicted RBP33.05■■■□□ 2.88
CXCL3-201ENST00000296026 KCNH8Q96L42 1107 aa33.05■■■□□ 2.88
CXCL3-201ENST00000296026 EEA1Q15075 1411 aa33.02■■■□□ 2.88
CXCL3-201ENST00000296026 CD109Q6YHK3 1445 aa33■■■□□ 2.87
CXCL3-201ENST00000296026 CFAP43Q8NDM7 1665 aa33■■■□□ 2.87
CXCL3-201ENST00000296026 SAMD9Q5K651 1589 aa32.99■■■□□ 2.87
CXCL3-201ENST00000296026 ARID3CA6NKF2 412 aa32.97■■■□□ 2.87
CXCL3-201ENST00000296026 MAGI3Q5TCQ9 1506 aa32.96■■■□□ 2.87
CXCL3-201ENST00000296026 ATP10BO94823 1461 aa32.94■■■□□ 2.86
CXCL3-201ENST00000296026 ADGRL1O94910 1474 aa32.88■■■□□ 2.85
CXCL3-201ENST00000296026 RAPGEF6Q8TEU7 1601 aa32.87■■■□□ 2.85
CXCL3-201ENST00000296026 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
CXCL3-201ENST00000296026 FHOD3Q2V2M9 1422 aa32.77■■■□□ 2.84
CXCL3-201ENST00000296026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.77■■■□□ 2.84
CXCL3-201ENST00000296026 HNRNPUL2Q1KMD3 747 aaKnown RBP32.77■■■□□ 2.84
CXCL3-201ENST00000296026 KIF21BO75037 1637 aa32.77■■■□□ 2.84
CXCL3-201ENST00000296026 ABCA9Q8IUA7 1624 aa32.76■■■□□ 2.83
CXCL3-201ENST00000296026 NUP153P49790 1475 aaKnown RBP32.74■■■□□ 2.83
CXCL3-201ENST00000296026 ARAP3Q8WWN8 1544 aa32.71■■■□□ 2.83
CXCL3-201ENST00000296026 EFCAB5A4FU69 1503 aa32.67■■■□□ 2.82
CXCL3-201ENST00000296026 PHLDB1Q86UU1 1377 aa32.63■■■□□ 2.81
CXCL3-201ENST00000296026 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
CXCL3-201ENST00000296026 NEO1Q92859 1461 aa32.58■■■□□ 2.81
CXCL3-201ENST00000296026 PLEKHD1A6NEE1 506 aa32.57■■■□□ 2.8
CXCL3-201ENST00000296026 EHMT2Q96KQ7 1210 aa32.57■■■□□ 2.8
CXCL3-201ENST00000296026 UBTFP17480 764 aaKnown RBP32.54■■■□□ 2.8
CXCL3-201ENST00000296026 RAPGEF3O95398 923 aa32.53■■■□□ 2.8
CXCL3-201ENST00000296026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.45■■■□□ 2.78
CXCL3-201ENST00000296026 CDK13Q14004 1512 aaKnown RBP32.44■■■□□ 2.78
CXCL3-201ENST00000296026 FRMPD1Q5SYB0 1578 aa32.44■■■□□ 2.78
CXCL3-201ENST00000296026 HECW2Q9P2P5 1572 aa32.41■■■□□ 2.78
CXCL3-201ENST00000296026 ARHGAP35Q9NRY4 1499 aa32.4■■■□□ 2.78
CXCL3-201ENST00000296026 TTC37Q6PGP7 1564 aa32.4■■■□□ 2.78
CXCL3-201ENST00000296026 FMN1Q68DA7 1419 aa32.39■■■□□ 2.78
CXCL3-201ENST00000296026 FANCAO15360 1455 aa32.38■■■□□ 2.77
CXCL3-201ENST00000296026 AKNAQ7Z591 1439 aa32.37■■■□□ 2.77
CXCL3-201ENST00000296026 CFAP74Q9C0B2 1584 aa32.36■■■□□ 2.77
CXCL3-201ENST00000296026 ATP1B4Q9UN42 357 aaPredicted RBP32.36■■■□□ 2.77
CXCL3-201ENST00000296026 DENND4BO75064 1496 aaPredicted RBP32.35■■■□□ 2.77
CXCL3-201ENST00000296026 HECW1Q76N89 1606 aa32.34■■■□□ 2.77
CXCL3-201ENST00000296026 RICTORQ6R327 1708 aa32.31■■■□□ 2.76
CXCL3-201ENST00000296026 ADAMTSL3P82987 1691 aa32.31■■■□□ 2.76
CXCL3-201ENST00000296026 ARID4BQ4LE39 1312 aaPredicted RBP32.27■■■□□ 2.76
CXCL3-201ENST00000296026 ARHGEF40Q8TER5 1519 aa32.26■■■□□ 2.76
CXCL3-201ENST00000296026 BCORL1Q5H9F3 1711 aa32.25■■■□□ 2.75
CXCL3-201ENST00000296026 PLCH2O75038 1416 aa32.24■■■□□ 2.75
CXCL3-201ENST00000296026 PTPRMP28827 1452 aa32.23■■■□□ 2.75
CXCL3-201ENST00000296026 CDK11AQ9UQ88 783 aaPredicted RBP32.23■■■□□ 2.75
CXCL3-201ENST00000296026 ZMYM4Q5VZL5 1548 aa32.2■■■□□ 2.74
CXCL3-201ENST00000296026 MADDQ8WXG6 1647 aa32.17■■■□□ 2.74
CXCL3-201ENST00000296026 MYO5CQ9NQX4 1742 aa32.16■■■□□ 2.74
CXCL3-201ENST00000296026 SCAPERQ9BY12 1400 aa32.16■■■□□ 2.74
CXCL3-201ENST00000296026 ZFYVE16Q7Z3T8 1539 aa32.15■■■□□ 2.74
CXCL3-201ENST00000296026 KIF14Q15058 1648 aa32.15■■■□□ 2.74
CXCL3-201ENST00000296026 LRRIQ1Q96JM4 1722 aa32.14■■■□□ 2.74
CXCL3-201ENST00000296026 TROQ12816 1431 aaPredicted RBP32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms