RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
KCNIP3-201ENST00000295225 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
KCNIP3-201ENST00000295225 IGF1RP08069 1367 aa19.12■□□□□ 0.65
KCNIP3-201ENST00000295225 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
KCNIP3-201ENST00000295225 BCANQ96GW7 911 aa19.11■□□□□ 0.65
KCNIP3-201ENST00000295225 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
KCNIP3-201ENST00000295225 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
KCNIP3-201ENST00000295225 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
KCNIP3-201ENST00000295225 FGD5Q6ZNL6 1462 aa19.07■□□□□ 0.64
KCNIP3-201ENST00000295225 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
KCNIP3-201ENST00000295225 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
KCNIP3-201ENST00000295225 PHLDB1Q86UU1 1377 aa19.05■□□□□ 0.64
KCNIP3-201ENST00000295225 NESP48681 1621 aa19.05■□□□□ 0.64
KCNIP3-201ENST00000295225 ARXQ96QS3 562 aa19.05■□□□□ 0.64
KCNIP3-201ENST00000295225 UBE2Q2Q8WVN8 375 aa19.04■□□□□ 0.64
KCNIP3-201ENST00000295225 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
KCNIP3-201ENST00000295225 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
KCNIP3-201ENST00000295225 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
KCNIP3-201ENST00000295225 PODXL2Q9NZ53 605 aa19.01■□□□□ 0.63
KCNIP3-201ENST00000295225 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
KCNIP3-201ENST00000295225 FHOD3Q2V2M9 1422 aa18.99■□□□□ 0.63
KCNIP3-201ENST00000295225 CLSPNQ9HAW4 1339 aa18.96■□□□□ 0.63
KCNIP3-201ENST00000295225 TRIM52Q96A61 297 aa18.94■□□□□ 0.62
KCNIP3-201ENST00000295225 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
KCNIP3-201ENST00000295225 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
KCNIP3-201ENST00000295225 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
KCNIP3-201ENST00000295225 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
KCNIP3-201ENST00000295225 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
KCNIP3-201ENST00000295225 LRRC9Q6ZRR7 1453 aa18.89■□□□□ 0.61
KCNIP3-201ENST00000295225 TIAM1Q13009 1591 aa18.88■□□□□ 0.61
KCNIP3-201ENST00000295225 RTN4Q9NQC3 1192 aaKnown RBP18.87■□□□□ 0.61
KCNIP3-201ENST00000295225 CHIC2Q9UKJ5 165 aa18.86■□□□□ 0.61
KCNIP3-201ENST00000295225 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
KCNIP3-201ENST00000295225 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
KCNIP3-201ENST00000295225 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.61
KCNIP3-201ENST00000295225 FKBP8Q14318 412 aa18.83■□□□□ 0.61
KCNIP3-201ENST00000295225 KLHL34Q8N239 644 aa18.83■□□□□ 0.6
KCNIP3-201ENST00000295225 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
KCNIP3-201ENST00000295225 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
KCNIP3-201ENST00000295225 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
KCNIP3-201ENST00000295225 CNGB1Q14028 1251 aaPredicted RBP18.78■□□□□ 0.6
KCNIP3-201ENST00000295225 TSHZ2Q9NRE2 1034 aa18.77■□□□□ 0.59
KCNIP3-201ENST00000295225 FOXD1Q16676 465 aa18.74■□□□□ 0.59
KCNIP3-201ENST00000295225 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
KCNIP3-201ENST00000295225 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
KCNIP3-201ENST00000295225 IRX6P78412 446 aaPredicted RBP18.73■□□□□ 0.59
KCNIP3-201ENST00000295225 TIMELESSQ9UNS1 1208 aa18.72■□□□□ 0.59
KCNIP3-201ENST00000295225 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
KCNIP3-201ENST00000295225 MTUS2Q5JR59 1369 aa18.71■□□□□ 0.59
KCNIP3-201ENST00000295225 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
KCNIP3-201ENST00000295225 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.58
KCNIP3-201ENST00000295225 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
KCNIP3-201ENST00000295225 SENP3-EIF4A1A0A087X0R7 540 aa18.68■□□□□ 0.58
KCNIP3-201ENST00000295225 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
KCNIP3-201ENST00000295225 ANP32CO43423 234 aa18.66■□□□□ 0.58
KCNIP3-201ENST00000295225 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
KCNIP3-201ENST00000295225 PKNOX2Q96KN3 472 aa18.64■□□□□ 0.58
KCNIP3-201ENST00000295225 AQRO60306 1485 aaKnown RBP eCLIP18.63■□□□□ 0.57
KCNIP3-201ENST00000295225 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
KCNIP3-201ENST00000295225 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
KCNIP3-201ENST00000295225 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.57
KCNIP3-201ENST00000295225 CASKIN1Q8WXD9 1431 aa18.58■□□□□ 0.56
KCNIP3-201ENST00000295225 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.56
KCNIP3-201ENST00000295225 CCDC184Q52MB2 194 aa18.56■□□□□ 0.56
KCNIP3-201ENST00000295225 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
KCNIP3-201ENST00000295225 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
KCNIP3-201ENST00000295225 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
KCNIP3-201ENST00000295225 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
KCNIP3-201ENST00000295225 FYCO1Q9BQS8 1478 aa18.54■□□□□ 0.56
KCNIP3-201ENST00000295225 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
KCNIP3-201ENST00000295225 NCOA2Q15596 1464 aa18.52■□□□□ 0.55
KCNIP3-201ENST00000295225 NEFLP07196 543 aa18.51■□□□□ 0.55
KCNIP3-201ENST00000295225 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
KCNIP3-201ENST00000295225 POLR3GLQ9BT43 218 aa18.51■□□□□ 0.55
KCNIP3-201ENST00000295225 CUL7Q14999 1698 aa18.5■□□□□ 0.55
KCNIP3-201ENST00000295225 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
KCNIP3-201ENST00000295225 CTTNBP2Q8WZ74 1663 aa18.49■□□□□ 0.55
KCNIP3-201ENST00000295225 ZNF644Q9H582 1327 aaPredicted RBP18.49■□□□□ 0.55
KCNIP3-201ENST00000295225 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
KCNIP3-201ENST00000295225 NAIPQ13075 1403 aa18.49■□□□□ 0.55
KCNIP3-201ENST00000295225 C11orf95C9JLR9 678 aaPredicted RBP18.48■□□□□ 0.55
KCNIP3-201ENST00000295225 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
KCNIP3-201ENST00000295225 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
KCNIP3-201ENST00000295225 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
KCNIP3-201ENST00000295225 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.54
KCNIP3-201ENST00000295225 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
KCNIP3-201ENST00000295225 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
KCNIP3-201ENST00000295225 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
KCNIP3-201ENST00000295225 PDIA4P13667 645 aaKnown RBP18.43■□□□□ 0.54
KCNIP3-201ENST00000295225 MYOM3Q5VTT5 1437 aa18.43■□□□□ 0.54
KCNIP3-201ENST00000295225 UACAQ9BZF9 1416 aa18.43■□□□□ 0.54
KCNIP3-201ENST00000295225 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
KCNIP3-201ENST00000295225 HFM1A2PYH4 1435 aa18.43■□□□□ 0.54
KCNIP3-201ENST00000295225 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
KCNIP3-201ENST00000295225 KDM6BO15054 1643 aa18.41■□□□□ 0.54
KCNIP3-201ENST00000295225 FBLN2P98095 1184 aa18.41■□□□□ 0.54
KCNIP3-201ENST00000295225 MPHOSPH9Q99550 1183 aa18.41■□□□□ 0.54
KCNIP3-201ENST00000295225 RBM19Q9Y4C8 960 aaKnown RBP18.41■□□□□ 0.54
KCNIP3-201ENST00000295225 CDK13Q14004 1512 aaKnown RBP18.41■□□□□ 0.54
KCNIP3-201ENST00000295225 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms