RNA–Protein interactions for RNA: ENST00000294543.10

TMCO4-201, Transcript of transmembrane and coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO4, Length 2,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-201ENST00000294543 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
TMCO4-201ENST00000294543 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
TMCO4-201ENST00000294543 CUX2O14529 1486 aa15.53■□□□□ 0.08
TMCO4-201ENST00000294543 TRIM52Q96A61 297 aa15.52■□□□□ 0.07
TMCO4-201ENST00000294543 FANCIQ9NVI1 1328 aa15.51■□□□□ 0.07
TMCO4-201ENST00000294543 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
TMCO4-201ENST00000294543 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
TMCO4-201ENST00000294543 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
TMCO4-201ENST00000294543 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
TMCO4-201ENST00000294543 IGF1RP08069 1367 aa15.46■□□□□ 0.07
TMCO4-201ENST00000294543 NBR1Q14596 966 aa15.45■□□□□ 0.06
TMCO4-201ENST00000294543 SALL2Q9Y467 1007 aaPredicted RBP15.45■□□□□ 0.06
TMCO4-201ENST00000294543 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
TMCO4-201ENST00000294543 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
TMCO4-201ENST00000294543 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
TMCO4-201ENST00000294543 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
TMCO4-201ENST00000294543 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
TMCO4-201ENST00000294543 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
TMCO4-201ENST00000294543 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
TMCO4-201ENST00000294543 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
TMCO4-201ENST00000294543 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
TMCO4-201ENST00000294543 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
TMCO4-201ENST00000294543 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
TMCO4-201ENST00000294543 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
TMCO4-201ENST00000294543 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
TMCO4-201ENST00000294543 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.05
TMCO4-201ENST00000294543 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
TMCO4-201ENST00000294543 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
TMCO4-201ENST00000294543 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
TMCO4-201ENST00000294543 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
TMCO4-201ENST00000294543 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
TMCO4-201ENST00000294543 ERICH6BQ5W0A0 696 aa15.29■□□□□ 0.04
TMCO4-201ENST00000294543 P3H3Q8IVL6 736 aa15.29■□□□□ 0.04
TMCO4-201ENST00000294543 ARHGAP35Q9NRY4 1499 aa15.29■□□□□ 0.04
TMCO4-201ENST00000294543 ANP32CO43423 234 aa15.28■□□□□ 0.04
TMCO4-201ENST00000294543 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
TMCO4-201ENST00000294543 HIRIP3Q9BW71 556 aaPredicted RBP15.27■□□□□ 0.04
TMCO4-201ENST00000294543 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
TMCO4-201ENST00000294543 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
TMCO4-201ENST00000294543 PAK3O75914 559 aaPredicted RBP15.24■□□□□ 0.03
TMCO4-201ENST00000294543 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
TMCO4-201ENST00000294543 CCER2I3L3R5 266 aa15.21■□□□□ 0.02
TMCO4-201ENST00000294543 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
TMCO4-201ENST00000294543 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
TMCO4-201ENST00000294543 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
TMCO4-201ENST00000294543 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
TMCO4-201ENST00000294543 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
TMCO4-201ENST00000294543 UBE2Q2Q8WVN8 375 aa15.17■□□□□ 0.02
TMCO4-201ENST00000294543 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
TMCO4-201ENST00000294543 PPP4R2Q9NY27 417 aa15.15■□□□□ 0.02
TMCO4-201ENST00000294543 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
TMCO4-201ENST00000294543 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
TMCO4-201ENST00000294543 AQRO60306 1485 aaKnown RBP eCLIP15.15■□□□□ 0.02
TMCO4-201ENST00000294543 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
TMCO4-201ENST00000294543 SIN3AQ96ST3 1273 aa15.14■□□□□ 0.01
TMCO4-201ENST00000294543 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
TMCO4-201ENST00000294543 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
TMCO4-201ENST00000294543 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
TMCO4-201ENST00000294543 CUL7Q14999 1698 aa15.12■□□□□ 0.01
TMCO4-201ENST00000294543 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
TMCO4-201ENST00000294543 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
TMCO4-201ENST00000294543 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0
TMCO4-201ENST00000294543 ERCC6Q03468 1493 aa15.08■□□□□ 0
TMCO4-201ENST00000294543 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
TMCO4-201ENST00000294543 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
TMCO4-201ENST00000294543 CTTNBP2Q8WZ74 1663 aa15.04■□□□□ -0
TMCO4-201ENST00000294543 IPO9Q96P70 1041 aaKnown RBP15.03■□□□□ -0
TMCO4-201ENST00000294543 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
TMCO4-201ENST00000294543 MAPKBP1O60336 1514 aa15.02■□□□□ -0
TMCO4-201ENST00000294543 WDR62O43379 1518 aa15.02□□□□□ -0.01
TMCO4-201ENST00000294543 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
TMCO4-201ENST00000294543 TIAM1Q13009 1591 aa15.01□□□□□ -0.01
TMCO4-201ENST00000294543 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
TMCO4-201ENST00000294543 PBRM1Q86U86 1689 aa15□□□□□ -0.01
TMCO4-201ENST00000294543 LRRC9Q6ZRR7 1453 aa15□□□□□ -0.01
TMCO4-201ENST00000294543 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
TMCO4-201ENST00000294543 EFCAB5A4FU69 1503 aa14.98□□□□□ -0.01
TMCO4-201ENST00000294543 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
TMCO4-201ENST00000294543 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
TMCO4-201ENST00000294543 NEFMP07197 916 aa14.96□□□□□ -0.02
TMCO4-201ENST00000294543 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
TMCO4-201ENST00000294543 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
TMCO4-201ENST00000294543 CASKIN1Q8WXD9 1431 aa14.94□□□□□ -0.02
TMCO4-201ENST00000294543 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
TMCO4-201ENST00000294543 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
TMCO4-201ENST00000294543 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
TMCO4-201ENST00000294543 FYCO1Q9BQS8 1478 aa14.92□□□□□ -0.02
TMCO4-201ENST00000294543 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
TMCO4-201ENST00000294543 SAMD9Q5K651 1589 aa14.91□□□□□ -0.02
TMCO4-201ENST00000294543 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
TMCO4-201ENST00000294543 ARID3CA6NKF2 412 aa14.91□□□□□ -0.02
TMCO4-201ENST00000294543 FBLN2P98095 1184 aa14.91□□□□□ -0.02
TMCO4-201ENST00000294543 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
TMCO4-201ENST00000294543 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
TMCO4-201ENST00000294543 CFAP43Q8NDM7 1665 aa14.89□□□□□ -0.03
TMCO4-201ENST00000294543 WASHC2AQ641Q2 1341 aa14.88□□□□□ -0.03
TMCO4-201ENST00000294543 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
TMCO4-201ENST00000294543 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
TMCO4-201ENST00000294543 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
TMCO4-201ENST00000294543 CCDC184Q52MB2 194 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 328.2 ms