RNA–Protein interactions for RNA: ENST00000294543.10

TMCO4-201, Transcript of transmembrane and coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO4, Length 2,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-201ENST00000294543 NISCHQ9Y2I1 1504 aa21.73■■□□□ 1.07
TMCO4-201ENST00000294543 HRCP23327 699 aa18.61■□□□□ 0.57
TMCO4-201ENST00000294543 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
TMCO4-201ENST00000294543 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
TMCO4-201ENST00000294543 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
TMCO4-201ENST00000294543 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
TMCO4-201ENST00000294543 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
TMCO4-201ENST00000294543 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
TMCO4-201ENST00000294543 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
TMCO4-201ENST00000294543 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
TMCO4-201ENST00000294543 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
TMCO4-201ENST00000294543 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
TMCO4-201ENST00000294543 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
TMCO4-201ENST00000294543 MYT1Q01538 1121 aa17.74■□□□□ 0.43
TMCO4-201ENST00000294543 ABCC9O60706 1549 aa17.71■□□□□ 0.43
TMCO4-201ENST00000294543 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
TMCO4-201ENST00000294543 SCRIBQ14160 1630 aa17.46■□□□□ 0.38
TMCO4-201ENST00000294543 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
TMCO4-201ENST00000294543 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
TMCO4-201ENST00000294543 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
TMCO4-201ENST00000294543 NACADO15069 1562 aa17.32■□□□□ 0.36
TMCO4-201ENST00000294543 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
TMCO4-201ENST00000294543 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
TMCO4-201ENST00000294543 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
TMCO4-201ENST00000294543 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
TMCO4-201ENST00000294543 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
TMCO4-201ENST00000294543 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
TMCO4-201ENST00000294543 CECR2Q9BXF3 1484 aa17.03■□□□□ 0.32
TMCO4-201ENST00000294543 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
TMCO4-201ENST00000294543 FAM9AQ8IZU1 332 aaPredicted RBP16.94■□□□□ 0.3
TMCO4-201ENST00000294543 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
TMCO4-201ENST00000294543 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
TMCO4-201ENST00000294543 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
TMCO4-201ENST00000294543 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
TMCO4-201ENST00000294543 TRIM41Q8WV44 630 aa16.84■□□□□ 0.29
TMCO4-201ENST00000294543 WIZO95785 1651 aa16.78■□□□□ 0.28
TMCO4-201ENST00000294543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
TMCO4-201ENST00000294543 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.27
TMCO4-201ENST00000294543 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
TMCO4-201ENST00000294543 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
TMCO4-201ENST00000294543 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
TMCO4-201ENST00000294543 TTBK1Q5TCY1 1321 aaPredicted RBP16.66■□□□□ 0.26
TMCO4-201ENST00000294543 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
TMCO4-201ENST00000294543 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
TMCO4-201ENST00000294543 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
TMCO4-201ENST00000294543 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
TMCO4-201ENST00000294543 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
TMCO4-201ENST00000294543 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
TMCO4-201ENST00000294543 MIER1Q8N108 512 aa16.39■□□□□ 0.21
TMCO4-201ENST00000294543 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
TMCO4-201ENST00000294543 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
TMCO4-201ENST00000294543 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
TMCO4-201ENST00000294543 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
TMCO4-201ENST00000294543 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
TMCO4-201ENST00000294543 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
TMCO4-201ENST00000294543 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
TMCO4-201ENST00000294543 SUPT16HQ9Y5B9 1047 aaKnown RBP16.26■□□□□ 0.19
TMCO4-201ENST00000294543 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
TMCO4-201ENST00000294543 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
TMCO4-201ENST00000294543 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
TMCO4-201ENST00000294543 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
TMCO4-201ENST00000294543 SOGA1O94964 1423 aa16.08■□□□□ 0.17
TMCO4-201ENST00000294543 NCAPD3P42695 1498 aa16.06■□□□□ 0.16
TMCO4-201ENST00000294543 WRNQ14191 1432 aaPredicted RBP eCLIP16.03■□□□□ 0.16
TMCO4-201ENST00000294543 BCANQ96GW7 911 aa16.03■□□□□ 0.16
TMCO4-201ENST00000294543 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
TMCO4-201ENST00000294543 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
TMCO4-201ENST00000294543 HMGXB3Q12766 1538 aa16■□□□□ 0.15
TMCO4-201ENST00000294543 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
TMCO4-201ENST00000294543 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
TMCO4-201ENST00000294543 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
TMCO4-201ENST00000294543 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
TMCO4-201ENST00000294543 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
TMCO4-201ENST00000294543 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
TMCO4-201ENST00000294543 FKBP8Q14318 412 aa15.84■□□□□ 0.13
TMCO4-201ENST00000294543 CFTRP13569 1480 aa15.82■□□□□ 0.12
TMCO4-201ENST00000294543 EEA1Q15075 1411 aa15.8■□□□□ 0.12
TMCO4-201ENST00000294543 ERICH6Q7L0X2 663 aa15.79■□□□□ 0.12
TMCO4-201ENST00000294543 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
TMCO4-201ENST00000294543 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
TMCO4-201ENST00000294543 CUX1P39880 1505 aa15.75■□□□□ 0.11
TMCO4-201ENST00000294543 ITGAEP38570 1179 aa15.75■□□□□ 0.11
TMCO4-201ENST00000294543 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
TMCO4-201ENST00000294543 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
TMCO4-201ENST00000294543 MSH5O43196 834 aa15.73■□□□□ 0.11
TMCO4-201ENST00000294543 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
TMCO4-201ENST00000294543 NEFLP07196 543 aa15.72■□□□□ 0.11
TMCO4-201ENST00000294543 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
TMCO4-201ENST00000294543 APLP2Q06481 763 aa15.69■□□□□ 0.1
TMCO4-201ENST00000294543 CLIP1P30622 1438 aa15.68■□□□□ 0.1
TMCO4-201ENST00000294543 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
TMCO4-201ENST00000294543 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
TMCO4-201ENST00000294543 NESP48681 1621 aa15.66■□□□□ 0.1
TMCO4-201ENST00000294543 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
TMCO4-201ENST00000294543 KIF21BO75037 1637 aa15.61■□□□□ 0.09
TMCO4-201ENST00000294543 DEKP35659 375 aaKnown RBP15.6■□□□□ 0.09
TMCO4-201ENST00000294543 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
TMCO4-201ENST00000294543 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
TMCO4-201ENST00000294543 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
TMCO4-201ENST00000294543 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms