RNA–Protein interactions for RNA: ENST00000290776.12

CPNE2-201, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-201ENST00000290776 PHLDB1Q86UU1 1377 aa30.33■■■□□ 2.45
CPNE2-201ENST00000290776 SETD5Q9C0A6 1442 aa30.33■■■□□ 2.45
CPNE2-201ENST00000290776 LRRC9Q6ZRR7 1453 aa30.3■■■□□ 2.44
CPNE2-201ENST00000290776 DDX10Q13206 875 aaKnown RBP30.28■■■□□ 2.44
CPNE2-201ENST00000290776 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
CPNE2-201ENST00000290776 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
CPNE2-201ENST00000290776 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
CPNE2-201ENST00000290776 MAP3K1Q13233 1512 aa30.22■■■□□ 2.43
CPNE2-201ENST00000290776 HIRIP3Q9BW71 556 aaPredicted RBP30.21■■■□□ 2.43
CPNE2-201ENST00000290776 BCANQ96GW7 911 aa30.19■■■□□ 2.42
CPNE2-201ENST00000290776 PCF11O94913 1555 aaKnown RBP30.17■■■□□ 2.42
CPNE2-201ENST00000290776 TSHZ2Q9NRE2 1034 aa30.16■■■□□ 2.42
CPNE2-201ENST00000290776 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
CPNE2-201ENST00000290776 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
CPNE2-201ENST00000290776 FHOD3Q2V2M9 1422 aa30.11■■■□□ 2.41
CPNE2-201ENST00000290776 CFAP43Q8NDM7 1665 aa30.09■■■□□ 2.41
CPNE2-201ENST00000290776 FKBP8Q14318 412 aa30.04■■■□□ 2.4
CPNE2-201ENST00000290776 PPP1R15AO75807 674 aaPredicted RBP30.02■■■□□ 2.4
CPNE2-201ENST00000290776 RAD54L2Q9Y4B4 1467 aa29.98■■■□□ 2.39
CPNE2-201ENST00000290776 TRIM52Q96A61 297 aa29.97■■■□□ 2.39
CPNE2-201ENST00000290776 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
CPNE2-201ENST00000290776 FYCO1Q9BQS8 1478 aa29.92■■■□□ 2.38
CPNE2-201ENST00000290776 ANP32CO43423 234 aa29.9■■■□□ 2.38
CPNE2-201ENST00000290776 TIMELESSQ9UNS1 1208 aa29.9■■■□□ 2.38
CPNE2-201ENST00000290776 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
CPNE2-201ENST00000290776 TONSLQ96HA7 1378 aa29.86■■■□□ 2.37
CPNE2-201ENST00000290776 FGD6Q6ZV73 1430 aa29.83■■■□□ 2.37
CPNE2-201ENST00000290776 NEFLP07196 543 aa29.82■■■□□ 2.36
CPNE2-201ENST00000290776 EFCAB5A4FU69 1503 aa29.82■■■□□ 2.36
CPNE2-201ENST00000290776 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
CPNE2-201ENST00000290776 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
CPNE2-201ENST00000290776 MTUS2Q5JR59 1369 aa29.8■■■□□ 2.36
CPNE2-201ENST00000290776 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
CPNE2-201ENST00000290776 CCER2I3L3R5 266 aa29.78■■■□□ 2.36
CPNE2-201ENST00000290776 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
CPNE2-201ENST00000290776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.77■■■□□ 2.36
CPNE2-201ENST00000290776 CTTNBP2Q8WZ74 1663 aa29.76■■■□□ 2.35
CPNE2-201ENST00000290776 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
CPNE2-201ENST00000290776 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
CPNE2-201ENST00000290776 PTPRKQ15262 1439 aa29.75■■■□□ 2.35
CPNE2-201ENST00000290776 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.35
CPNE2-201ENST00000290776 FMN1Q68DA7 1419 aa29.73■■■□□ 2.35
CPNE2-201ENST00000290776 ANP32EQ9BTT0 268 aa29.72■■■□□ 2.35
CPNE2-201ENST00000290776 NESP48681 1621 aa29.72■■■□□ 2.35
CPNE2-201ENST00000290776 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
CPNE2-201ENST00000290776 CUL7Q14999 1698 aa29.69■■■□□ 2.34
CPNE2-201ENST00000290776 HFM1A2PYH4 1435 aa29.67■■■□□ 2.34
CPNE2-201ENST00000290776 UACAQ9BZF9 1416 aa29.67■■■□□ 2.34
CPNE2-201ENST00000290776 PTPN23Q9H3S7 1636 aa29.66■■■□□ 2.34
CPNE2-201ENST00000290776 LRRIQ1Q96JM4 1722 aa29.61■■■□□ 2.33
CPNE2-201ENST00000290776 NCOA2Q15596 1464 aa29.61■■■□□ 2.33
CPNE2-201ENST00000290776 NAIPQ13075 1403 aa29.6■■■□□ 2.33
CPNE2-201ENST00000290776 TDRD9Q8NDG6 1382 aaKnown RBP29.6■■■□□ 2.33
CPNE2-201ENST00000290776 RRP7BPQ9NSQ0 103 aa29.58■■■□□ 2.33
CPNE2-201ENST00000290776 CHIC2Q9UKJ5 165 aa29.58■■■□□ 2.33
CPNE2-201ENST00000290776 MYOM3Q5VTT5 1437 aa29.57■■■□□ 2.32
CPNE2-201ENST00000290776 RBM19Q9Y4C8 960 aaKnown RBP29.56■■■□□ 2.32
CPNE2-201ENST00000290776 HNRNPUQ00839 825 aaKnown RBP eCLIP29.55■■■□□ 2.32
CPNE2-201ENST00000290776 IRX6P78412 446 aaPredicted RBP29.5■■■□□ 2.31
CPNE2-201ENST00000290776 SUPT6HQ7KZ85 1726 aaKnown RBP29.49■■■□□ 2.31
CPNE2-201ENST00000290776 SAMD9Q5K651 1589 aa29.49■■■□□ 2.31
CPNE2-201ENST00000290776 GRIN2BQ13224 1484 aa29.49■■■□□ 2.31
CPNE2-201ENST00000290776 URB2Q14146 1524 aaKnown RBP29.47■■■□□ 2.31
CPNE2-201ENST00000290776 KDM5BQ9UGL1 1544 aa29.47■■■□□ 2.31
CPNE2-201ENST00000290776 HSPA5P11021 654 aaKnown RBP29.45■■■□□ 2.31
CPNE2-201ENST00000290776 WASHC2AQ641Q2 1341 aa29.44■■■□□ 2.3
CPNE2-201ENST00000290776 EHBP1L1Q8N3D4 1523 aa29.43■■■□□ 2.3
CPNE2-201ENST00000290776 ARID3CA6NKF2 412 aa29.42■■■□□ 2.3
CPNE2-201ENST00000290776 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
CPNE2-201ENST00000290776 MAGI3Q5TCQ9 1506 aa29.4■■■□□ 2.3
CPNE2-201ENST00000290776 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
CPNE2-201ENST00000290776 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
CPNE2-201ENST00000290776 UGGT2Q9NYU1 1516 aa29.38■■■□□ 2.29
CPNE2-201ENST00000290776 FOXD1Q16676 465 aa29.37■■■□□ 2.29
CPNE2-201ENST00000290776 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
CPNE2-201ENST00000290776 KDM6BO15054 1643 aa29.33■■■□□ 2.29
CPNE2-201ENST00000290776 DENND4BO75064 1496 aaPredicted RBP29.33■■■□□ 2.29
CPNE2-201ENST00000290776 EIF4G2P78344 907 aaKnown RBP eCLIP29.32■■■□□ 2.28
CPNE2-201ENST00000290776 CCDC184Q52MB2 194 aa29.31■■■□□ 2.28
CPNE2-201ENST00000290776 MPHOSPH9Q99550 1183 aa29.27■■■□□ 2.28
CPNE2-201ENST00000290776 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
CPNE2-201ENST00000290776 ARHGEF11O15085 1522 aa29.27■■■□□ 2.28
CPNE2-201ENST00000290776 L3MBTL2Q969R5 705 aa29.27■■■□□ 2.28
CPNE2-201ENST00000290776 GCC2Q8IWJ2 1684 aa29.26■■■□□ 2.27
CPNE2-201ENST00000290776 HECW1Q76N89 1606 aa29.26■■■□□ 2.27
CPNE2-201ENST00000290776 C11orf95C9JLR9 678 aaPredicted RBP29.24■■■□□ 2.27
CPNE2-201ENST00000290776 FAM9BQ8IZU0 186 aa29.23■■■□□ 2.27
CPNE2-201ENST00000290776 CDK13Q14004 1512 aaKnown RBP29.22■■■□□ 2.27
CPNE2-201ENST00000290776 TCOF1Q13428 1488 aaKnown RBP29.21■■■□□ 2.27
CPNE2-201ENST00000290776 CNTLNQ9NXG0 1405 aa29.2■■■□□ 2.27
CPNE2-201ENST00000290776 CDK11AQ9UQ88 783 aaPredicted RBP29.19■■■□□ 2.26
CPNE2-201ENST00000290776 MSH5O43196 834 aa29.19■■■□□ 2.26
CPNE2-201ENST00000290776 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
CPNE2-201ENST00000290776 EPRSP07814 1512 aaKnown RBP29.18■■■□□ 2.26
CPNE2-201ENST00000290776 MRS2Q9HD23 443 aa29.14■■■□□ 2.26
CPNE2-201ENST00000290776 PRKRIP1Q9H875 184 aaPredicted RBP29.13■■■□□ 2.25
CPNE2-201ENST00000290776 CCDC7Q96M83 1385 aa29.13■■■□□ 2.25
CPNE2-201ENST00000290776 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
CPNE2-201ENST00000290776 CNGB1Q14028 1251 aaPredicted RBP29.11■■■□□ 2.25
CPNE2-201ENST00000290776 NBPF8Q3BBV2 869 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms