RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 NEUROD1Q13562 356 aa8.9□□□□□ -0.99
TNFSF4-201ENST00000281834 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
TNFSF4-201ENST00000281834 ABCA10Q8WWZ4 1543 aa8.89□□□□□ -0.99
TNFSF4-201ENST00000281834 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
TNFSF4-201ENST00000281834 LAMC3Q9Y6N6 1575 aa8.87□□□□□ -0.99
TNFSF4-201ENST00000281834 PHLDB1Q86UU1 1377 aa8.87□□□□□ -0.99
TNFSF4-201ENST00000281834 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
TNFSF4-201ENST00000281834 FHAD1B1AJZ9 1412 aa8.85□□□□□ -0.99
TNFSF4-201ENST00000281834 ERCC6Q03468 1493 aa8.85□□□□□ -0.99
TNFSF4-201ENST00000281834 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
TNFSF4-201ENST00000281834 DHX57Q6P158 1386 aaKnown RBP8.84□□□□□ -0.99
TNFSF4-201ENST00000281834 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
TNFSF4-201ENST00000281834 SIN3AQ96ST3 1273 aa8.83□□□□□ -1
TNFSF4-201ENST00000281834 LRRC9Q6ZRR7 1453 aa8.82□□□□□ -1
TNFSF4-201ENST00000281834 RAB3GAP2Q9H2M9 1393 aa8.82□□□□□ -1
TNFSF4-201ENST00000281834 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
TNFSF4-201ENST00000281834 MIER1Q8N108 512 aa8.81□□□□□ -1
TNFSF4-201ENST00000281834 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
TNFSF4-201ENST00000281834 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
TNFSF4-201ENST00000281834 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
TNFSF4-201ENST00000281834 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
TNFSF4-201ENST00000281834 TIAM1Q13009 1591 aa8.8□□□□□ -1
TNFSF4-201ENST00000281834 RRP7BPQ9NSQ0 103 aa8.79□□□□□ -1
TNFSF4-201ENST00000281834 FMN1Q68DA7 1419 aa8.78□□□□□ -1
TNFSF4-201ENST00000281834 MRC2Q9UBG0 1479 aa8.78□□□□□ -1
TNFSF4-201ENST00000281834 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
TNFSF4-201ENST00000281834 TRIM52Q96A61 297 aa8.77□□□□□ -1.01
TNFSF4-201ENST00000281834 CASKIN1Q8WXD9 1431 aa8.76□□□□□ -1.01
TNFSF4-201ENST00000281834 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
TNFSF4-201ENST00000281834 SETD5Q9C0A6 1442 aa8.76□□□□□ -1.01
TNFSF4-201ENST00000281834 CENPBP07199 599 aaPredicted RBP8.75□□□□□ -1.01
TNFSF4-201ENST00000281834 CUL7Q14999 1698 aa8.75□□□□□ -1.01
TNFSF4-201ENST00000281834 FYCO1Q9BQS8 1478 aa8.74□□□□□ -1.01
TNFSF4-201ENST00000281834 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
TNFSF4-201ENST00000281834 GRIN2BQ13224 1484 aa8.73□□□□□ -1.01
TNFSF4-201ENST00000281834 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
TNFSF4-201ENST00000281834 SNAPC4Q5SXM2 1469 aa8.72□□□□□ -1.01
TNFSF4-201ENST00000281834 EFCAB5A4FU69 1503 aa8.72□□□□□ -1.01
TNFSF4-201ENST00000281834 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.01
TNFSF4-201ENST00000281834 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
TNFSF4-201ENST00000281834 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
TNFSF4-201ENST00000281834 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
TNFSF4-201ENST00000281834 FOXD1Q16676 465 aa8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 ZNF644Q9H582 1327 aaPredicted RBP8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 NCOA2Q15596 1464 aa8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 CDK13Q14004 1512 aaKnown RBP8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 IFT140Q96RY7 1462 aa8.69□□□□□ -1.02
TNFSF4-201ENST00000281834 DDX10Q13206 875 aaKnown RBP8.69□□□□□ -1.02
TNFSF4-201ENST00000281834 WDR97A6NE52 1622 aa8.69□□□□□ -1.02
TNFSF4-201ENST00000281834 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
TNFSF4-201ENST00000281834 PTPRKQ15262 1439 aa8.68□□□□□ -1.02
TNFSF4-201ENST00000281834 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
TNFSF4-201ENST00000281834 IQGAP2Q13576 1575 aa8.67□□□□□ -1.02
TNFSF4-201ENST00000281834 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
TNFSF4-201ENST00000281834 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
TNFSF4-201ENST00000281834 TONSLQ96HA7 1378 aa8.66□□□□□ -1.02
TNFSF4-201ENST00000281834 CFDP1Q9UEE9 299 aaPredicted RBP8.65□□□□□ -1.03
TNFSF4-201ENST00000281834 ADAMTS12P58397 1594 aa8.65□□□□□ -1.03
TNFSF4-201ENST00000281834 CNGB1Q14028 1251 aaPredicted RBP8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 CFAP43Q8NDM7 1665 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 EPRSP07814 1512 aaKnown RBP8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 MAGI3Q5TCQ9 1506 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 GRIN2AQ12879 1464 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 CCDC18Q5T9S5 1454 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 SAMD9Q5K651 1589 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 WDR62O43379 1518 aa8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 EIF4G3O43432 1585 aaKnown RBP8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 PRG4Q92954 1404 aaPredicted RBP8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 KIAA0586Q9BVV6 1533 aa8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 PLEKHD1A6NEE1 506 aa8.61□□□□□ -1.03
TNFSF4-201ENST00000281834 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
TNFSF4-201ENST00000281834 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
TNFSF4-201ENST00000281834 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
TNFSF4-201ENST00000281834 NAIPQ13075 1403 aa8.6□□□□□ -1.03
TNFSF4-201ENST00000281834 POLR3GLQ9BT43 218 aa8.59□□□□□ -1.03
TNFSF4-201ENST00000281834 EHBP1L1Q8N3D4 1523 aa8.59□□□□□ -1.03
TNFSF4-201ENST00000281834 DISP1Q96F81 1524 aa8.59□□□□□ -1.03
TNFSF4-201ENST00000281834 MPHOSPH9Q99550 1183 aa8.59□□□□□ -1.04
TNFSF4-201ENST00000281834 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 CARMIL2Q6F5E8 1435 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 SYNJ2O15056 1496 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 HECW1Q76N89 1606 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
TNFSF4-201ENST00000281834 PTPN23Q9H3S7 1636 aa8.57□□□□□ -1.04
TNFSF4-201ENST00000281834 HNRNPMP52272 730 aaKnown RBP eCLIP8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 UACAQ9BZF9 1416 aa8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 UGGT2Q9NYU1 1516 aa8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 MAGI1Q96QZ7 1491 aaPredicted RBP8.55□□□□□ -1.04
TNFSF4-201ENST00000281834 KIAA0556O60303 1618 aa8.55□□□□□ -1.04
TNFSF4-201ENST00000281834 L3MBTL2Q969R5 705 aa8.55□□□□□ -1.04
TNFSF4-201ENST00000281834 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms