RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
SEC24D-201ENST00000280551 UBTFP17480 764 aaKnown RBP16.03■□□□□ 0.16
SEC24D-201ENST00000280551 TIAM1Q13009 1591 aa16.02■□□□□ 0.15
SEC24D-201ENST00000280551 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
SEC24D-201ENST00000280551 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
SEC24D-201ENST00000280551 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
SEC24D-201ENST00000280551 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
SEC24D-201ENST00000280551 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
SEC24D-201ENST00000280551 FYCO1Q9BQS8 1478 aa15.99■□□□□ 0.15
SEC24D-201ENST00000280551 IQGAP2Q13576 1575 aa15.98■□□□□ 0.15
SEC24D-201ENST00000280551 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
SEC24D-201ENST00000280551 PCGF6Q9BYE7 350 aa15.94■□□□□ 0.14
SEC24D-201ENST00000280551 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
SEC24D-201ENST00000280551 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
SEC24D-201ENST00000280551 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
SEC24D-201ENST00000280551 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
SEC24D-201ENST00000280551 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
SEC24D-201ENST00000280551 SYNJ2O15056 1496 aa15.89■□□□□ 0.13
SEC24D-201ENST00000280551 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
SEC24D-201ENST00000280551 NUP160Q12769 1436 aa15.88■□□□□ 0.13
SEC24D-201ENST00000280551 KIAA0586Q9BVV6 1533 aa15.88■□□□□ 0.13
SEC24D-201ENST00000280551 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
SEC24D-201ENST00000280551 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
SEC24D-201ENST00000280551 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
SEC24D-201ENST00000280551 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
SEC24D-201ENST00000280551 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
SEC24D-201ENST00000280551 DISP1Q96F81 1524 aa15.83■□□□□ 0.13
SEC24D-201ENST00000280551 HECW1Q76N89 1606 aa15.81■□□□□ 0.12
SEC24D-201ENST00000280551 CHD1O14646 1710 aa15.79■□□□□ 0.12
SEC24D-201ENST00000280551 FHOD3Q2V2M9 1422 aa15.78■□□□□ 0.12
SEC24D-201ENST00000280551 CCDC18Q5T9S5 1454 aa15.77■□□□□ 0.11
SEC24D-201ENST00000280551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.76■□□□□ 0.11
SEC24D-201ENST00000280551 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
SEC24D-201ENST00000280551 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
SEC24D-201ENST00000280551 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
SEC24D-201ENST00000280551 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
SEC24D-201ENST00000280551 MAGI3Q5TCQ9 1506 aa15.7■□□□□ 0.1
SEC24D-201ENST00000280551 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
SEC24D-201ENST00000280551 ABCA8O94911 1581 aa15.68■□□□□ 0.1
SEC24D-201ENST00000280551 KANK4Q5T7N3 995 aaPredicted RBP15.68■□□□□ 0.1
SEC24D-201ENST00000280551 EPRSP07814 1512 aaKnown RBP15.65■□□□□ 0.1
SEC24D-201ENST00000280551 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
SEC24D-201ENST00000280551 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
SEC24D-201ENST00000280551 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
SEC24D-201ENST00000280551 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
SEC24D-201ENST00000280551 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
SEC24D-201ENST00000280551 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
SEC24D-201ENST00000280551 NCOA2Q15596 1464 aa15.55■□□□□ 0.08
SEC24D-201ENST00000280551 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
SEC24D-201ENST00000280551 APLP2Q06481 763 aa15.55■□□□□ 0.08
SEC24D-201ENST00000280551 ITSN2Q9NZM3 1697 aa15.54■□□□□ 0.08
SEC24D-201ENST00000280551 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
SEC24D-201ENST00000280551 CROCC2H7BZ55 1655 aa15.52■□□□□ 0.08
SEC24D-201ENST00000280551 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.07
SEC24D-201ENST00000280551 CDK13Q14004 1512 aaKnown RBP15.51■□□□□ 0.07
SEC24D-201ENST00000280551 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
SEC24D-201ENST00000280551 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
SEC24D-201ENST00000280551 CARMIL2Q6F5E8 1435 aa15.49■□□□□ 0.07
SEC24D-201ENST00000280551 CLSPNQ9HAW4 1339 aa15.48■□□□□ 0.07
SEC24D-201ENST00000280551 CDC42BPAQ5VT25 1732 aa15.48■□□□□ 0.07
SEC24D-201ENST00000280551 DNMT1P26358 1616 aaKnown RBP15.47■□□□□ 0.07
SEC24D-201ENST00000280551 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
SEC24D-201ENST00000280551 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
SEC24D-201ENST00000280551 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
SEC24D-201ENST00000280551 ABCC10Q5T3U5 1492 aa15.43■□□□□ 0.06
SEC24D-201ENST00000280551 KIF14Q15058 1648 aa15.43■□□□□ 0.06
SEC24D-201ENST00000280551 PLB1Q6P1J6 1458 aa15.42■□□□□ 0.06
SEC24D-201ENST00000280551 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
SEC24D-201ENST00000280551 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
SEC24D-201ENST00000280551 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
SEC24D-201ENST00000280551 DHX57Q6P158 1386 aaKnown RBP15.41■□□□□ 0.06
SEC24D-201ENST00000280551 ABCC2Q92887 1545 aa15.4■□□□□ 0.06
SEC24D-201ENST00000280551 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
SEC24D-201ENST00000280551 HFM1A2PYH4 1435 aa15.4■□□□□ 0.06
SEC24D-201ENST00000280551 KDM5BQ9UGL1 1544 aa15.39■□□□□ 0.05
SEC24D-201ENST00000280551 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
SEC24D-201ENST00000280551 JPH4Q96JJ6 628 aa15.39■□□□□ 0.05
SEC24D-201ENST00000280551 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
SEC24D-201ENST00000280551 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
SEC24D-201ENST00000280551 ATP10BO94823 1461 aa15.38■□□□□ 0.05
SEC24D-201ENST00000280551 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
SEC24D-201ENST00000280551 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
SEC24D-201ENST00000280551 CDC42BPBQ9Y5S2 1711 aa15.37■□□□□ 0.05
SEC24D-201ENST00000280551 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
SEC24D-201ENST00000280551 ARHGEF5Q12774 1597 aa15.35■□□□□ 0.05
SEC24D-201ENST00000280551 ZCCHC11Q5TAX3 1644 aaKnown RBP15.34■□□□□ 0.05
SEC24D-201ENST00000280551 ADGRL2O95490 1459 aa15.33■□□□□ 0.05
SEC24D-201ENST00000280551 GPATCH8Q9UKJ3 1502 aaKnown RBP15.32■□□□□ 0.04
SEC24D-201ENST00000280551 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
SEC24D-201ENST00000280551 ROCK1Q13464 1354 aa15.32■□□□□ 0.04
SEC24D-201ENST00000280551 SHANK2Q9UPX8 1470 aa15.31■□□□□ 0.04
SEC24D-201ENST00000280551 MAST1Q9Y2H9 1570 aa15.31■□□□□ 0.04
SEC24D-201ENST00000280551 NAIPQ13075 1403 aa15.31■□□□□ 0.04
SEC24D-201ENST00000280551 UACAQ9BZF9 1416 aa15.31■□□□□ 0.04
SEC24D-201ENST00000280551 ARAP3Q8WWN8 1544 aa15.3■□□□□ 0.04
SEC24D-201ENST00000280551 RAB3GAP2Q9H2M9 1393 aa15.3■□□□□ 0.04
SEC24D-201ENST00000280551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
SEC24D-201ENST00000280551 MYO5CQ9NQX4 1742 aa15.29■□□□□ 0.04
SEC24D-201ENST00000280551 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
SEC24D-201ENST00000280551 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms