RNA–Protein interactions for RNA: ENST00000276833.9

SLC39A4-201, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2 BASIC

Gene SLC39A4, Length 2,297 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-201ENST00000276833 TIMELESSQ9UNS1 1208 aa27.44■■□□□ 1.98
SLC39A4-201ENST00000276833 MAP3K1Q13233 1512 aa27.43■■□□□ 1.98
SLC39A4-201ENST00000276833 ITGAEP38570 1179 aa27.42■■□□□ 1.98
SLC39A4-201ENST00000276833 TRIM52Q96A61 297 aa27.38■■□□□ 1.97
SLC39A4-201ENST00000276833 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
SLC39A4-201ENST00000276833 ANP32CO43423 234 aa27.35■■□□□ 1.97
SLC39A4-201ENST00000276833 SIN3AQ96ST3 1273 aa27.33■■□□□ 1.97
SLC39A4-201ENST00000276833 KIF27Q86VH2 1401 aa27.32■■□□□ 1.96
SLC39A4-201ENST00000276833 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
SLC39A4-201ENST00000276833 CUX1P39880 1505 aa27.25■■□□□ 1.95
SLC39A4-201ENST00000276833 LRRC9Q6ZRR7 1453 aa27.23■■□□□ 1.95
SLC39A4-201ENST00000276833 PHLDB1Q86UU1 1377 aa27.21■■□□□ 1.95
SLC39A4-201ENST00000276833 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
SLC39A4-201ENST00000276833 MYT1LQ9UL68 1186 aa27.19■■□□□ 1.94
SLC39A4-201ENST00000276833 HIRIP3Q9BW71 556 aaPredicted RBP27.16■■□□□ 1.94
SLC39A4-201ENST00000276833 ERICH6BQ5W0A0 696 aa27.13■■□□□ 1.93
SLC39A4-201ENST00000276833 ERICH6Q7L0X2 663 aa27.12■■□□□ 1.93
SLC39A4-201ENST00000276833 CFAP43Q8NDM7 1665 aa27.1■■□□□ 1.93
SLC39A4-201ENST00000276833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.05■■□□□ 1.92
SLC39A4-201ENST00000276833 FAM50AQ14320 339 aaKnown RBP27.04■■□□□ 1.92
SLC39A4-201ENST00000276833 HNRNPUQ00839 825 aaKnown RBP eCLIP27.02■■□□□ 1.92
SLC39A4-201ENST00000276833 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
SLC39A4-201ENST00000276833 TONSLQ96HA7 1378 aa26.98■■□□□ 1.91
SLC39A4-201ENST00000276833 IRX6P78412 446 aaPredicted RBP26.98■■□□□ 1.91
SLC39A4-201ENST00000276833 PPP4R2Q9NY27 417 aa26.98■■□□□ 1.91
SLC39A4-201ENST00000276833 IGF1RP08069 1367 aa26.96■■□□□ 1.91
SLC39A4-201ENST00000276833 PCF11O94913 1555 aaKnown RBP26.94■■□□□ 1.9
SLC39A4-201ENST00000276833 DEKP35659 375 aaKnown RBP26.92■■□□□ 1.9
SLC39A4-201ENST00000276833 KDM5BQ9UGL1 1544 aa26.91■■□□□ 1.9
SLC39A4-201ENST00000276833 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
SLC39A4-201ENST00000276833 CFTRP13569 1480 aa26.88■■□□□ 1.89
SLC39A4-201ENST00000276833 UACAQ9BZF9 1416 aa26.87■■□□□ 1.89
SLC39A4-201ENST00000276833 CCDC18Q5T9S5 1454 aa26.85■■□□□ 1.89
SLC39A4-201ENST00000276833 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.89
SLC39A4-201ENST00000276833 HFM1A2PYH4 1435 aa26.82■■□□□ 1.88
SLC39A4-201ENST00000276833 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
SLC39A4-201ENST00000276833 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
SLC39A4-201ENST00000276833 NCOA2Q15596 1464 aa26.81■■□□□ 1.88
SLC39A4-201ENST00000276833 WASHC2AQ641Q2 1341 aa26.78■■□□□ 1.88
SLC39A4-201ENST00000276833 PTPN23Q9H3S7 1636 aa26.78■■□□□ 1.88
SLC39A4-201ENST00000276833 FGD6Q6ZV73 1430 aa26.78■■□□□ 1.88
SLC39A4-201ENST00000276833 AQRO60306 1485 aaKnown RBP eCLIP26.77■■□□□ 1.882e-8■■■■■ 28.7
SLC39A4-201ENST00000276833 NOP58Q9Y2X3 529 aaKnown RBP26.76■■□□□ 1.87
SLC39A4-201ENST00000276833 CASKIN1Q8WXD9 1431 aa26.74■■□□□ 1.87
SLC39A4-201ENST00000276833 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
SLC39A4-201ENST00000276833 PRKCSHP14314 528 aaPredicted RBP26.73■■□□□ 1.87
SLC39A4-201ENST00000276833 PTPRKQ15262 1439 aa26.72■■□□□ 1.87
SLC39A4-201ENST00000276833 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
SLC39A4-201ENST00000276833 B4GALNT3Q6L9W6 998 aa26.72■■□□□ 1.87
SLC39A4-201ENST00000276833 PRDM2Q13029 1718 aa26.71■■□□□ 1.87
SLC39A4-201ENST00000276833 ZBED9Q6R2W3 1325 aa26.71■■□□□ 1.87
SLC39A4-201ENST00000276833 NAIPQ13075 1403 aa26.68■■□□□ 1.86
SLC39A4-201ENST00000276833 EFCAB5A4FU69 1503 aa26.68■■□□□ 1.86
SLC39A4-201ENST00000276833 HSPA5P11021 654 aaKnown RBP26.68■■□□□ 1.86
SLC39A4-201ENST00000276833 CCDC184Q52MB2 194 aa26.68■■□□□ 1.86
SLC39A4-201ENST00000276833 FHOD3Q2V2M9 1422 aa26.65■■□□□ 1.86
SLC39A4-201ENST00000276833 PAK3O75914 559 aaPredicted RBP26.64■■□□□ 1.86
SLC39A4-201ENST00000276833 PRKRIP1Q9H875 184 aaPredicted RBP26.6■■□□□ 1.85
SLC39A4-201ENST00000276833 P3H3Q8IVL6 736 aa26.6■■□□□ 1.85
SLC39A4-201ENST00000276833 ATP1B4Q9UN42 357 aaPredicted RBP26.58■■□□□ 1.85
SLC39A4-201ENST00000276833 NCOA1Q15788 1441 aa26.58■■□□□ 1.85
SLC39A4-201ENST00000276833 FMN1Q68DA7 1419 aa26.58■■□□□ 1.85
SLC39A4-201ENST00000276833 EIF4G2P78344 907 aaKnown RBP eCLIP26.57■■□□□ 1.84
SLC39A4-201ENST00000276833 NBR1Q14596 966 aa26.56■■□□□ 1.84
SLC39A4-201ENST00000276833 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
SLC39A4-201ENST00000276833 CCDC7Q96M83 1385 aa26.53■■□□□ 1.84
SLC39A4-201ENST00000276833 DENND4BO75064 1496 aaPredicted RBP26.52■■□□□ 1.84
SLC39A4-201ENST00000276833 FAM9BQ8IZU0 186 aa26.52■■□□□ 1.84
SLC39A4-201ENST00000276833 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
SLC39A4-201ENST00000276833 MRS2Q9HD23 443 aa26.51■■□□□ 1.84
SLC39A4-201ENST00000276833 SMG6Q86US8 1419 aaKnown RBP26.51■■□□□ 1.83
SLC39A4-201ENST00000276833 IPO9Q96P70 1041 aaKnown RBP26.5■■□□□ 1.83
SLC39A4-201ENST00000276833 MYOM3Q5VTT5 1437 aa26.5■■□□□ 1.83
SLC39A4-201ENST00000276833 RNF123Q5XPI4 1314 aa26.5■■□□□ 1.83
SLC39A4-201ENST00000276833 C11orf95C9JLR9 678 aaPredicted RBP26.48■■□□□ 1.83
SLC39A4-201ENST00000276833 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
SLC39A4-201ENST00000276833 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
SLC39A4-201ENST00000276833 ANP32AP39687 249 aaKnown RBP26.45■■□□□ 1.82
SLC39A4-201ENST00000276833 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
SLC39A4-201ENST00000276833 CTTNBP2Q8WZ74 1663 aa26.43■■□□□ 1.82
SLC39A4-201ENST00000276833 POLR1AO95602 1720 aaPredicted RBP26.41■■□□□ 1.82
SLC39A4-201ENST00000276833 AKNAQ7Z591 1439 aa26.41■■□□□ 1.82
SLC39A4-201ENST00000276833 LRRIQ1Q96JM4 1722 aa26.4■■□□□ 1.82
SLC39A4-201ENST00000276833 RTL5Q5HYW3 569 aaPredicted RBP26.39■■□□□ 1.81
SLC39A4-201ENST00000276833 SUPT6HQ7KZ85 1726 aaKnown RBP26.38■■□□□ 1.81
SLC39A4-201ENST00000276833 ZBTB47Q9UFB7 747 aaPredicted RBP26.37■■□□□ 1.81
SLC39A4-201ENST00000276833 ANO8Q9HCE9 1232 aaPredicted RBP26.37■■□□□ 1.81
SLC39A4-201ENST00000276833 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
SLC39A4-201ENST00000276833 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
SLC39A4-201ENST00000276833 NUDCQ9Y266 331 aa26.36■■□□□ 1.81
SLC39A4-201ENST00000276833 ARHGEF11O15085 1522 aa26.36■■□□□ 1.81
SLC39A4-201ENST00000276833 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
SLC39A4-201ENST00000276833 EHBP1L1Q8N3D4 1523 aa26.35■■□□□ 1.81
SLC39A4-201ENST00000276833 CUL7Q14999 1698 aa26.34■■□□□ 1.81
SLC39A4-201ENST00000276833 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
SLC39A4-201ENST00000276833 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
SLC39A4-201ENST00000276833 CCDC136Q96JN2 1154 aa26.34■■□□□ 1.81
SLC39A4-201ENST00000276833 UGGT2Q9NYU1 1516 aa26.34■■□□□ 1.81
SLC39A4-201ENST00000276833 TCOF1Q13428 1488 aaKnown RBP26.33■■□□□ 1.81
SLC39A4-201ENST00000276833 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms