RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
SLC47A1-201ENST00000270570 NEFLP07196 543 aa18.67■□□□□ 0.58
SLC47A1-201ENST00000270570 TSHZ2Q9NRE2 1034 aa18.67■□□□□ 0.58
SLC47A1-201ENST00000270570 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
SLC47A1-201ENST00000270570 IGF1RP08069 1367 aa18.65■□□□□ 0.58
SLC47A1-201ENST00000270570 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
SLC47A1-201ENST00000270570 ANP32CO43423 234 aa18.63■□□□□ 0.57
SLC47A1-201ENST00000270570 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
SLC47A1-201ENST00000270570 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
SLC47A1-201ENST00000270570 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
SLC47A1-201ENST00000270570 RRP7BPQ9NSQ0 103 aa18.59■□□□□ 0.57
SLC47A1-201ENST00000270570 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
SLC47A1-201ENST00000270570 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
SLC47A1-201ENST00000270570 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
SLC47A1-201ENST00000270570 HNRNPUQ00839 825 aaKnown RBP eCLIP18.53■□□□□ 0.56
SLC47A1-201ENST00000270570 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
SLC47A1-201ENST00000270570 FOXD1Q16676 465 aa18.52■□□□□ 0.55
SLC47A1-201ENST00000270570 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
SLC47A1-201ENST00000270570 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
SLC47A1-201ENST00000270570 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
SLC47A1-201ENST00000270570 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
SLC47A1-201ENST00000270570 NCAPD3P42695 1498 aa18.49■□□□□ 0.55
SLC47A1-201ENST00000270570 PPP1R15AO75807 674 aaPredicted RBP18.49■□□□□ 0.55
SLC47A1-201ENST00000270570 CFTRP13569 1480 aa18.49■□□□□ 0.55
SLC47A1-201ENST00000270570 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
SLC47A1-201ENST00000270570 MAPKBP1O60336 1514 aa18.47■□□□□ 0.55
SLC47A1-201ENST00000270570 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
SLC47A1-201ENST00000270570 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
SLC47A1-201ENST00000270570 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
SLC47A1-201ENST00000270570 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
SLC47A1-201ENST00000270570 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
SLC47A1-201ENST00000270570 TIAM1Q13009 1591 aa18.4■□□□□ 0.54
SLC47A1-201ENST00000270570 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
SLC47A1-201ENST00000270570 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
SLC47A1-201ENST00000270570 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
SLC47A1-201ENST00000270570 NESP48681 1621 aa18.36■□□□□ 0.53
SLC47A1-201ENST00000270570 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
SLC47A1-201ENST00000270570 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
SLC47A1-201ENST00000270570 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
SLC47A1-201ENST00000270570 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
SLC47A1-201ENST00000270570 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
SLC47A1-201ENST00000270570 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.51
SLC47A1-201ENST00000270570 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
SLC47A1-201ENST00000270570 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
SLC47A1-201ENST00000270570 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
SLC47A1-201ENST00000270570 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
SLC47A1-201ENST00000270570 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
SLC47A1-201ENST00000270570 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
SLC47A1-201ENST00000270570 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
SLC47A1-201ENST00000270570 L3MBTL2Q969R5 705 aa18.21■□□□□ 0.51
SLC47A1-201ENST00000270570 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
SLC47A1-201ENST00000270570 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
SLC47A1-201ENST00000270570 FBLN2P98095 1184 aa18.19■□□□□ 0.5
SLC47A1-201ENST00000270570 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.51e-7■■■□□ 16.7
SLC47A1-201ENST00000270570 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
SLC47A1-201ENST00000270570 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
SLC47A1-201ENST00000270570 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
SLC47A1-201ENST00000270570 C11orf95C9JLR9 678 aaPredicted RBP18.17■□□□□ 0.5
SLC47A1-201ENST00000270570 TIMELESSQ9UNS1 1208 aa18.17■□□□□ 0.5
SLC47A1-201ENST00000270570 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
SLC47A1-201ENST00000270570 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
SLC47A1-201ENST00000270570 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
SLC47A1-201ENST00000270570 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
SLC47A1-201ENST00000270570 FMN1Q68DA7 1419 aa18.14■□□□□ 0.49
SLC47A1-201ENST00000270570 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
SLC47A1-201ENST00000270570 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
SLC47A1-201ENST00000270570 NAIPQ13075 1403 aa18.1■□□□□ 0.49
SLC47A1-201ENST00000270570 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
SLC47A1-201ENST00000270570 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
SLC47A1-201ENST00000270570 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
SLC47A1-201ENST00000270570 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
SLC47A1-201ENST00000270570 MSH5O43196 834 aa18.08■□□□□ 0.49
SLC47A1-201ENST00000270570 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
SLC47A1-201ENST00000270570 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
SLC47A1-201ENST00000270570 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
SLC47A1-201ENST00000270570 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
SLC47A1-201ENST00000270570 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
SLC47A1-201ENST00000270570 NBR1Q14596 966 aa18.01■□□□□ 0.47
SLC47A1-201ENST00000270570 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
SLC47A1-201ENST00000270570 PRDM2Q13029 1718 aa18■□□□□ 0.47
SLC47A1-201ENST00000270570 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
SLC47A1-201ENST00000270570 CDK13Q14004 1512 aaKnown RBP17.97■□□□□ 0.47
SLC47A1-201ENST00000270570 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
SLC47A1-201ENST00000270570 CFAP43Q8NDM7 1665 aa17.97■□□□□ 0.47
SLC47A1-201ENST00000270570 PDS5BQ9NTI5 1447 aa17.96■□□□□ 0.47
SLC47A1-201ENST00000270570 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
SLC47A1-201ENST00000270570 URB2Q14146 1524 aaKnown RBP17.95■□□□□ 0.46
SLC47A1-201ENST00000270570 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
SLC47A1-201ENST00000270570 KIF7Q2M1P5 1343 aa17.94■□□□□ 0.46
SLC47A1-201ENST00000270570 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
SLC47A1-201ENST00000270570 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
SLC47A1-201ENST00000270570 PRKCSHP14314 528 aaPredicted RBP17.93■□□□□ 0.46
SLC47A1-201ENST00000270570 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
SLC47A1-201ENST00000270570 EFCAB5A4FU69 1503 aa17.92■□□□□ 0.46
SLC47A1-201ENST00000270570 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
SLC47A1-201ENST00000270570 PKD2Q13563 968 aa17.91■□□□□ 0.46
SLC47A1-201ENST00000270570 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
SLC47A1-201ENST00000270570 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
SLC47A1-201ENST00000270570 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
SLC47A1-201ENST00000270570 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms